Orthogroup:group_2280


Homologs in group_2280

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17520 FBDBKF_17520 Morganella morganii S1 rpsU 30S ribosomal protein S21
EHELCC_17415 EHELCC_17415 Morganella morganii S2 rpsU 30S ribosomal protein S21
NLDBIP_17780 NLDBIP_17780 Morganella morganii S4 rpsU 30S ribosomal protein S21
LHKJJB_17700 LHKJJB_17700 Morganella morganii S3 rpsU 30S ribosomal protein S21
HKOGLL_17710 HKOGLL_17710 Morganella morganii S5 rpsU 30S ribosomal protein S21
F4V73_RS16700 F4V73_RS16700 Morganella psychrotolerans rpsU 30S ribosomal protein S21
PMI_RS11720 PMI_RS11720 Proteus mirabilis HI4320 rpsU 30S ribosomal protein S21

Distribution of group_2280 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2280 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2280

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2280.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpsU 7

Product

# Product Occurence
1 30S ribosomal protein S21 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0828 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S21

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02970 7 small subunit ribosomal protein S21 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01165 7 Ribosomal protein S21

Annotations of the 504 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein bS21 462
Small ribosomal subunit protein bS21A 14
Small ribosomal subunit protein bS21B 19
Small ribosomal subunit protein bS21C 9

Protein length

Unique protein length 71

Protein length distribution