Orthogroup:group_2090



Homologs in group_2090

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7 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15705 FBDBKF_15705 Morganella morganii S1 merD mercury resistance co-regulator MerD
FBDBKF_20220 FBDBKF_20220 Morganella morganii S1 merD mercury resistance co-regulator MerD
EHELCC_16060 EHELCC_16060 Morganella morganii S2 merD mercury resistance co-regulator MerD
EHELCC_19585 EHELCC_19585 Morganella morganii S2 merD mercury resistance co-regulator MerD
NLDBIP_16305 NLDBIP_16305 Morganella morganii S4 merD mercury resistance co-regulator MerD
LHKJJB_16495 LHKJJB_16495 Morganella morganii S3 merD mercury resistance co-regulator MerD
HKOGLL_16265 HKOGLL_16265 Morganella morganii S5 merD mercury resistance co-regulator MerD

Distribution of group_2090 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2090 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2090

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2090.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 merD 7

Product

# Product Occurence
1 mercury resistance co-regulator MerD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0789 7 K Transcription (K) DNA-binding transcriptional regulator, MerR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19057 7 MerR family transcriptional regulator, mercuric resistance operon regulatory protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13411 7 MerR HTH family regulatory protein

AMR gene Annotation(s)

Gene Occurences Description Scope Type Class Subclass HMM
merD 7 mercury resistance co-regulator MerD plus STRESS MERCURY MERCURY NF033783 

Annotations of the 21 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator mta 1
HTH-type transcriptional regulator MerD 6
HTH-type transcriptional regulator MerD (Fragment) 1
HTH-type transcriptional regulator SkgA 2
HTH-type transcriptional regulator ZntR 2
Mercuric resistance operon regulatory protein 6
Mercuric resistance operon regulatory protein (Fragment) 1
Nodulation protein NolA 1
Probable heavy metal-dependent transcriptional regulator HI_0293 1

Protein length

Min length 120
Max length 121
Mean length (sd) 120.7 (0.5)
Median length 121.0

Protein length distribution