Orthogroup:group_2077


Homologs in group_2077

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15540 FBDBKF_15540 Morganella morganii S1 asd aspartate-semialdehyde dehydrogenase
EHELCC_15900 EHELCC_15900 Morganella morganii S2 asd aspartate-semialdehyde dehydrogenase
NLDBIP_16470 NLDBIP_16470 Morganella morganii S4 asd aspartate-semialdehyde dehydrogenase
LHKJJB_16335 LHKJJB_16335 Morganella morganii S3 asd aspartate-semialdehyde dehydrogenase
HKOGLL_16105 HKOGLL_16105 Morganella morganii S5 asd aspartate-semialdehyde dehydrogenase
F4V73_RS17610 F4V73_RS17610 Morganella psychrotolerans asd aspartate-semialdehyde dehydrogenase
PMI_RS15520 PMI_RS15520 Proteus mirabilis HI4320 asd aspartate-semialdehyde dehydrogenase

Distribution of group_2077 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2077 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2077

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2077.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 asd 7

Product

# Product Occurence
1 aspartate-semialdehyde dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0136 7 E Amino acid transport and metabolism (E) Aspartate-semialdehyde dehydrogenase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00133 7 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Glycine, serine and threonine metabolism
Monobactam biosynthesis
Cysteine and methionine metabolism
Lysine biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
2-Oxocarboxylic acid metabolism
Biosynthesis of amino acids		 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Methionine biosynthesis, aspartate => homoserine => methionine
Threonine biosynthesis, aspartate => homoserine => threonine
Ectoine biosynthesis, aspartate => ectoine
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01118 7 Semialdehyde dehydrogenase, NAD binding domain
PF02774 7 Semialdehyde dehydrogenase, dimerisation domain

Annotations of the 44 SwissProt hits

Annotation Number of occurrences
Aspartate-semialdehyde dehydrogenase 40
Aspartate-semialdehyde dehydrogenase (Fragment) 2
Aspartate-semialdehyde dehydrogenase 1 1
Aspartate-semialdehyde dehydrogenase 2 1

Protein length

Min length 368
Max length 369
Mean length (sd) 368.9 (0.4)
Median length 369.0

Protein length distribution