Orthogroup:group_2048


Homologs in group_2048

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15350 FBDBKF_15350 Morganella morganii S1 raiA ribosome-associated translation inhibitor RaiA
EHELCC_10895 EHELCC_10895 Morganella morganii S2 raiA ribosome-associated translation inhibitor RaiA
NLDBIP_11240 NLDBIP_11240 Morganella morganii S4 raiA ribosome-associated translation inhibitor RaiA
LHKJJB_11100 LHKJJB_11100 Morganella morganii S3 raiA ribosome-associated translation inhibitor RaiA
HKOGLL_09710 HKOGLL_09710 Morganella morganii S5 raiA ribosome-associated translation inhibitor RaiA
F4V73_RS12105 F4V73_RS12105 Morganella psychrotolerans raiA ribosome-associated translation inhibitor RaiA
PMI_RS01900 PMI_RS01900 Proteus mirabilis HI4320 raiA ribosome-associated translation inhibitor RaiA

Distribution of group_2048 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2048 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2048

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2048.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 raiA 7

Product

# Product Occurence
1 ribosome-associated translation inhibitor RaiA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1544 7 J Translation, ribosomal structure and biogenesis (J) Ribosome-associated translation inhibitor RaiA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05809 7 ribosome-associated inhibitor A - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02482 7 Sigma 54 modulation protein / S30EA ribosomal protein

Annotations of the 37 SwissProt hits

Annotation Number of occurrences
Ribosome hibernation promoting factor 11
Ribosome hibernation promoting factor (Fragment) 1
Ribosome hibernation promotion factor 20
Ribosome-associated factor Y 4
Ribosome-associated inhibitor A 1

Protein length

Min length 111
Max length 114
Mean length (sd) 113.6 (1.1)
Median length 114.0

Protein length distribution