Orthogroup:group_2005


Homologs in group_2005

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15070 FBDBKF_15070 Morganella morganii S1 pulO Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase
EHELCC_11175 EHELCC_11175 Morganella morganii S2 pulO Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase
NLDBIP_11520 NLDBIP_11520 Morganella morganii S4 pulO Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase
LHKJJB_11380 LHKJJB_11380 Morganella morganii S3 pulO Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase
HKOGLL_09990 HKOGLL_09990 Morganella morganii S5 pulO Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase
F4V73_RS12380 F4V73_RS12380 Morganella psychrotolerans - A24 family peptidase
PMI_RS01635 PMI_RS01635 Proteus mirabilis HI4320 - A24 family peptidase

Distribution of group_2005 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2005 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2005

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2005.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pulO 5
2 - 2

Product

# Product Occurence
1 Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase 5
2 A24 family peptidase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1989 7 NU Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01478 7 Type IV leader peptidase family

Annotations of the 24 SwissProt hits

Annotation Number of occurrences
Leader peptidase HopD 2
Prepilin leader peptidase/N-methyltransferase 20
Prepilin peptidase PppA 1
Type 4 prepilin-like proteins leader peptide-processing enzyme 1

Protein length

Min length 210
Max length 229
Mean length (sd) 217.7 (5.6)
Median length 217.0

Protein length distribution