K08300


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K08300
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K08300
KO K08300
Description ribonuclease E [EC:3.1.26.12]

KO part of 1 pathways

RNA degradation

KO part of 0 modules

Occurence in the database

K08300 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2005 FBDBKF_14760 47868 51032 1 rne ribonuclease E Morganella morganii S1
1 group_2005 EHELCC_15565 77944 81108 1 rne ribonuclease E Morganella morganii S2
2 group_2005 NLDBIP_16095 77944 81108 1 rne ribonuclease E Morganella morganii S4
3 group_2005 LHKJJB_15745 35578 38742 -1 rne ribonuclease E Morganella morganii S3
4 group_2005 HKOGLL_14865 34790 37954 -1 rne ribonuclease E Morganella morganii S5
5 group_2005 F4V73_RS07555 1576676 1579888 1 rne ribonuclease E Morganella psychrotolerans
6 group_2005 PMI_RS04180 941186 944707 -1 rne ribonuclease E Proteus mirabilis HI4320