Orthogroup:group_1865


Homologs in group_1865

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13945 FBDBKF_13945 Morganella morganii S1 rnhA ribonuclease HI
EHELCC_11615 EHELCC_11615 Morganella morganii S2 rnhA ribonuclease HI
NLDBIP_11960 NLDBIP_11960 Morganella morganii S4 rnhA ribonuclease HI
LHKJJB_11820 LHKJJB_11820 Morganella morganii S3 rnhA ribonuclease HI
HKOGLL_10430 HKOGLL_10430 Morganella morganii S5 rnhA ribonuclease HI
F4V73_RS12800 F4V73_RS12800 Morganella psychrotolerans rnhA ribonuclease HI
PMI_RS01095 PMI_RS01095 Proteus mirabilis HI4320 rnhA ribonuclease HI

Distribution of group_1865 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1865 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1865

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1865.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rnhA 7

Product

# Product Occurence
1 ribonuclease HI 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0328 7 L Replication, recombination and repair (L) Ribonuclease HI

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03469 7 ribonuclease HI [EC:3.1.26.4] DNA replication -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00075 7 RNase H

Annotations of the 347 SwissProt hits

Annotation Number of occurrences
14.7 kDa ribonuclease H-like protein 1
Gag-Pol polyprotein 4
Pro-Pol polyprotein 2
Probable ribonuclease H 1
Ribonuclease H 305
Ribonuclease H1 3
Ribonuclease HI 31

Protein length

Min length 155
Max length 159
Mean length (sd) 156.3 (1.3)
Median length 156.0

Protein length distribution