Orthogroup:group_1800


Homologs in group_1800

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13365 FBDBKF_13365 Morganella morganii S1 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase
EHELCC_08730 EHELCC_08730 Morganella morganii S2 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase
NLDBIP_09055 NLDBIP_09055 Morganella morganii S4 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase
LHKJJB_05210 LHKJJB_05210 Morganella morganii S3 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase
HKOGLL_05705 HKOGLL_05705 Morganella morganii S5 arnD 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase
F4V73_RS03395 F4V73_RS03395 Morganella psychrotolerans arnD 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
PMI_RS05085 PMI_RS05085 Proteus mirabilis HI4320 arnD 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase

Distribution of group_1800 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1800 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1800

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1800.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 arnD 7

Product

# Product Occurence
1 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase 5
2 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0726 7 GM Carbohydrate transport and metabolism (G)
Cell wall/membrane/envelope biogenesis (M)		 Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01522 7 Polysaccharide deacetylase

Annotations of the 72 SwissProt hits

Annotation Number of occurrences
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD 72

Protein length

Unique protein length 297

Protein length distribution