Orthogroup:group_175


Homologs in group_175

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09015 FBDBKF_09015 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_10395 EHELCC_10395 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_10740 NLDBIP_10740 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_10615 LHKJJB_10615 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13675 HKOGLL_13675 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS10955 F4V73_RS10955 Morganella psychrotolerans - fimbrial protein
PMI_RS01255 PMI_RS01255 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01305 PMI_RS01305 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09285 PMI_RS09285 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_175 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_175 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_175

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_175.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimA 5
2 - 4

Product

# Product Occurence
1 Pilin (type 1 fimbrial protein) 5
2 fimbrial protein 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 9 N Cell motility (N) Pilin (type 1 fimbrial protein)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 9 Fimbrial protein

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042614 1 type 1 fimbrial protein VF1236 Adherence
VFG042627 7 type 1 fimbrial protein VF1233 Adherence

Annotations of the 40 SwissProt hits

Annotation Number of occurrences
Fimbria A protein 1
Fimbrial adapter PapK 2
Fimbrial protein 987P 1
Fimbrial subunit ElfA 1
Fimbrial subunit type 1 3
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 2
KS71A fimbrillin 1
Laminin-binding fimbrial subunit ElfA 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
Major fimbrial subunit 1
PAP fimbrial minor pilin protein 1
PRS fimbrial major pilin protein (Fragment) 1
PRS fimbrial minor pilin protein 1
Pap fimbrial major pilin protein 1
Probable major fimbrial subunit LpfA 1
Protein FimF 1
Protein PrsK 1
Putative fimbrin-like protein FimI 1
Putative minor fimbrial subunit PmfF 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YbgD 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YfcP 1
Uncharacterized fimbrial-like protein YfcV 1
Uncharacterized fimbrial-like protein YgiL 1
Uncharacterized fimbrial-like protein YraH 1

Protein length

Min length 178
Max length 182
Mean length (sd) 180.9 (1.2)
Median length 181.0

Protein length distribution