Orthogroup:group_1421


Homologs in group_1421

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08775 FBDBKF_08775 Morganella morganii S1 yhbP YhbP family protein
EHELCC_12750 EHELCC_12750 Morganella morganii S2 yhbP YhbP family protein
NLDBIP_13090 NLDBIP_13090 Morganella morganii S4 yhbP YhbP family protein
LHKJJB_13465 LHKJJB_13465 Morganella morganii S3 yhbP YhbP family protein
HKOGLL_11565 HKOGLL_11565 Morganella morganii S5 yhbP YhbP family protein
F4V73_RS09990 F4V73_RS09990 Morganella psychrotolerans - YhbP family protein
PMI_RS17180 PMI_RS17180 Proteus mirabilis HI4320 - YhbP family protein

Distribution of group_1421 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1421 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1421

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1421.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yhbP 5
2 - 2

Product

# Product Occurence
1 YhbP family protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3787 7 S Function unknown (S) Uncharacterized conserved protein YhbP, UPF0306 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09979 7 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01243 2 Pyridoxamine 5'-phosphate oxidase

Annotations of the 65 SwissProt hits

Annotation Number of occurrences
UPF0306 protein C8J_1355 1
UPF0306 protein CKO_04548 1
UPF0306 protein Cj1449c 1
UPF0306 protein ESA_03544 1
UPF0306 protein Ent638_3591 1
UPF0306 protein HD_1359 1
UPF0306 protein KPK_0562 1
UPF0306 protein KPN78578_35330 1
UPF0306 protein PM1958 1
UPF0306 protein Spro_0510 1
UPF0306 protein WS0399 1
UPF0306 protein YE0465 1
UPF0306 protein YPA_2969 1
UPF0306 protein YPDSF_3277 1
UPF0306 protein YPK_3704 1
UPF0306 protein YPN_0620 1
UPF0306 protein YPO3467/y0717/YP_0616 1
UPF0306 protein YPTB0506 1
UPF0306 protein YPTS_0536 1
UPF0306 protein YhbP 43
UPF0306 protein YpAngola_A4021 1
UPF0306 protein YpsIP31758_3570 1
UPF0306 protein plu4501 1

Protein length

Min length 146
Max length 149
Mean length (sd) 147.1 (0.9)
Median length 147.0

Protein length distribution