Homologs in group_1421

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08455 FBDBKF_08455 90.4 Morganella morganii S1 hfq RNA chaperone Hfq
EHELCC_13070 EHELCC_13070 90.4 Morganella morganii S2 hfq RNA chaperone Hfq
NLDBIP_13410 NLDBIP_13410 90.4 Morganella morganii S4 hfq RNA chaperone Hfq
LHKJJB_13145 LHKJJB_13145 90.4 Morganella morganii S3 hfq RNA chaperone Hfq
HKOGLL_11885 HKOGLL_11885 90.4 Morganella morganii S5 hfq RNA chaperone Hfq
F4V73_RS09675 F4V73_RS09675 90.4 Morganella psychrotolerans hfq RNA chaperone Hfq

Distribution of the homologs in the orthogroup group_1421

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1421

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4F266 4.1e-67 199 100 0 96 3 hfq RNA-binding protein Hfq Proteus mirabilis (strain HI4320)
B2TY47 5.32e-52 160 85 0 90 3 hfq RNA-binding protein Hfq Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
C6DFJ7 8.22e-52 160 81 1 99 3 hfq RNA-binding protein Hfq Pectobacterium carotovorum subsp. carotovorum (strain PC1)
B7NGA6 1.07e-51 160 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q3YUH1 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Shigella sonnei (strain Ss046)
P0A6X6 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Shigella flexneri
Q0SXB0 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Shigella flexneri serotype 5b (strain 8401)
Q31TA2 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Shigella boydii serotype 4 (strain Sb227)
B7LLV4 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q1R388 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli (strain UTI89 / UPEC)
B1LQJ2 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli (strain SMS-3-5 / SECEC)
B6I276 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli (strain SE11)
P0A6X3 2.27e-51 159 85 0 90 1 hfq RNA-binding protein Hfq Escherichia coli (strain K12)
B1IT34 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A6X4 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0T9M1 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AJ78 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O1:K1 / APEC
A8A7R6 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O9:H4 (strain HS)
B1XDS3 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli (strain K12 / DH10B)
C4ZR49 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli (strain K12 / MC4100 / BW2952)
B7M8T2 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O8 (strain IAI1)
B7MSJ0 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O81 (strain ED1a)
B7NTM8 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5Z2H8 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A6X5 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O157:H7
B7LC31 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli (strain 55989 / EAEC)
B7MKX6 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UQI1 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZV41 2.27e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Escherichia coli O139:H28 (strain E24377A / ETEC)
A8AMM9 2.39e-51 159 85 0 90 3 hfq RNA-binding protein Hfq Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
P0A1R0 3.15e-51 159 81 1 100 1 hfq RNA-binding protein Hfq Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1R1 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella typhi
B4TSF2 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella schwarzengrund (strain CVM19633)
B5BKI1 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella paratyphi A (strain AKU_12601)
C0Q6C9 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella paratyphi C (strain RKS4594)
A9N4Y6 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PL47 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4T2R7 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella newport (strain SL254)
B5R0N9 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella enteritidis PT4 (strain P125109)
B5FRM8 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella dublin (strain CT_02021853)
B5F387 3.15e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella agona (strain SL483)
B5R9B9 3.67e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q57GL9 3.67e-51 159 81 1 100 3 hfq RNA-binding protein Hfq Salmonella choleraesuis (strain SC-B67)
B1JMN9 3.97e-51 159 82 2 101 3 hfq RNA-binding protein Hfq Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66FB5 3.97e-51 159 82 2 101 3 hfq RNA-binding protein Hfq Yersinia pseudotuberculosis serotype I (strain IP32953)
Q1CEF5 3.97e-51 159 82 2 101 3 hfq RNA-binding protein Hfq Yersinia pestis bv. Antiqua (strain Nepal516)
A9QYN1 3.97e-51 159 82 2 101 3 hfq RNA-binding protein Hfq Yersinia pestis bv. Antiqua (strain Angola)
Q8ZIW2 3.97e-51 159 82 2 101 3 hfq RNA-binding protein Hfq Yersinia pestis
B2K204 3.97e-51 159 82 2 101 3 hfq RNA-binding protein Hfq Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C100 3.97e-51 159 82 2 101 3 hfq RNA-binding protein Hfq Yersinia pestis bv. Antiqua (strain Antiqua)
A7FMX9 3.97e-51 159 82 2 101 3 hfq RNA-binding protein Hfq Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4W5R3 4.27e-51 159 83 2 98 3 hfq RNA-binding protein Hfq Enterobacter sp. (strain 638)
Q328F1 4.67e-51 158 85 0 90 3 hfq RNA-binding protein Hfq Shigella dysenteriae serotype 1 (strain Sd197)
Q6D067 6.91e-51 158 88 2 92 3 hfq RNA-binding protein Hfq Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
B4TFA6 1.27e-50 157 80 1 100 3 hfq RNA-binding protein Hfq Salmonella heidelberg (strain SL476)
A9MFP0 2.24e-50 157 85 0 90 3 hfq RNA-binding protein Hfq Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q9ZI76 2.75e-50 156 83 2 97 3 hfq RNA-binding protein Hfq Pectobacterium carotovorum subsp. carotovorum
A8G8U9 3.02e-50 156 89 1 87 3 hfq RNA-binding protein Hfq Serratia proteamaculans (strain 568)
Q56928 3.06e-50 156 81 2 101 3 hfq RNA-binding protein Hfq Yersinia enterocolitica
A1JIR5 3.06e-50 156 81 2 101 3 hfq RNA-binding protein Hfq Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A6TH87 5e-50 156 80 2 102 3 hfq RNA-binding protein Hfq Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5Y332 5e-50 156 80 2 102 3 hfq RNA-binding protein Hfq Klebsiella pneumoniae (strain 342)
A4TRN9 5.59e-50 155 81 2 101 3 hfq RNA-binding protein Hfq Yersinia pestis (strain Pestoides F)
Q7MYU0 2.32e-49 154 79 2 102 3 hfq RNA-binding protein Hfq Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A7MM89 3.06e-49 154 82 1 95 3 hfq RNA-binding protein Hfq Cronobacter sakazakii (strain ATCC BAA-894)
B2VCX3 3.77e-49 154 87 1 88 3 hfq RNA-binding protein Hfq Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q2NW63 1.72e-48 152 78 0 96 3 hfq RNA-binding protein Hfq Sodalis glossinidius (strain morsitans)
A3QAE0 6.56e-47 147 79 2 98 3 hfq RNA-binding protein Hfq Shewanella loihica (strain ATCC BAA-1088 / PV-4)
C3LR79 1.47e-46 147 95 0 72 3 hfq RNA-binding protein Hfq Vibrio cholerae serotype O1 (strain M66-2)
Q9KV11 1.47e-46 147 95 0 72 1 hfq RNA-binding protein Hfq Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F3L7 1.47e-46 147 95 0 72 3 hfq RNA-binding protein Hfq Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q7MH02 1.62e-46 146 95 0 72 3 hfq RNA-binding protein Hfq Vibrio vulnificus (strain YJ016)
Q8DCU9 1.62e-46 146 95 0 72 3 hfq RNA-binding protein Hfq Vibrio vulnificus (strain CMCP6)
A1SA21 1.67e-46 146 79 3 97 3 hfq RNA-binding protein Hfq Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
C4L9M9 2.44e-46 146 93 0 72 3 hfq RNA-binding protein Hfq Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4)
Q87L07 2.65e-46 146 95 0 72 3 hfq RNA-binding protein Hfq Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A7MX76 2.65e-46 146 95 0 72 3 hfq RNA-binding protein Hfq Vibrio campbellii (strain ATCC BAA-1116)
A8FRD5 9.2e-46 145 79 1 93 3 hfq RNA-binding protein Hfq Shewanella sediminis (strain HAW-EB3)
B8CIX6 1.53e-45 144 78 2 96 3 hfq RNA-binding protein Hfq Shewanella piezotolerans (strain WP3 / JCM 13877)
B5FBR4 1.71e-45 144 88 0 78 3 hfq RNA-binding protein Hfq Aliivibrio fischeri (strain MJ11)
Q5E2C8 1.71e-45 144 88 0 78 3 hfq RNA-binding protein Hfq Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q9EYZ5 1.74e-45 144 94 0 71 3 hfq RNA-binding protein Hfq Photobacterium profundum (strain SS9)
A8H8G6 1.76e-45 144 79 2 96 3 hfq RNA-binding protein Hfq Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
A5UGS5 2.13e-45 144 91 0 73 3 hfq RNA-binding protein Hfq Haemophilus influenzae (strain PittGG)
A5UA77 2.13e-45 144 91 0 73 3 hfq RNA-binding protein Hfq Haemophilus influenzae (strain PittEE)
Q4QND2 2.13e-45 144 91 0 73 3 hfq RNA-binding protein Hfq Haemophilus influenzae (strain 86-028NP)
P44437 2.25e-45 144 91 0 73 3 hfq RNA-binding protein Hfq Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B7VI55 2.51e-45 144 94 0 72 3 hfq RNA-binding protein Hfq Vibrio atlanticus (strain LGP32)
B0TU64 2.83e-45 144 80 2 93 3 hfq RNA-binding protein Hfq Shewanella halifaxensis (strain HAW-EB4)
B1KHU8 3.1e-45 143 74 2 99 3 hfq RNA-binding protein Hfq Shewanella woodyi (strain ATCC 51908 / MS32)
A0KGS1 4.86e-45 143 90 0 74 3 hfq RNA-binding protein Hfq Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
A4SR25 6.19e-45 142 90 0 74 3 hfq RNA-binding protein Hfq Aeromonas salmonicida (strain A449)
Q65SD5 8.19e-45 142 91 0 73 3 hfq RNA-binding protein Hfq Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
B8F663 8.26e-45 142 89 0 74 3 hfq RNA-binding protein Hfq Glaesserella parasuis serovar 5 (strain SH0165)
B0UTF5 1.3e-44 142 89 0 74 3 hfq RNA-binding protein Hfq Histophilus somni (strain 2336)
Q0I441 1.3e-44 142 89 0 74 3 hfq RNA-binding protein Hfq Histophilus somni (strain 129Pt)
B3H331 2.17e-44 141 89 1 77 3 hfq RNA-binding protein Hfq Actinobacillus pleuropneumoniae serotype 7 (strain AP76)
A3N3P9 2.17e-44 141 89 1 77 3 hfq RNA-binding protein Hfq Actinobacillus pleuropneumoniae serotype 5b (strain L20)
A6VN08 2.41e-44 141 92 0 71 3 hfq RNA-binding protein Hfq Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
Q7VN44 2.5e-44 141 89 0 73 3 hfq RNA-binding protein Hfq Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q9CMC6 2.56e-44 141 92 0 71 3 hfq RNA-binding protein Hfq Pasteurella multocida (strain Pm70)
B0BTY6 5.29e-44 140 75 1 96 3 hfq RNA-binding protein Hfq Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
Q07XW7 5.59e-44 140 88 0 76 3 hfq RNA-binding protein Hfq Shewanella frigidimarina (strain NCIMB 400)
B6EMQ7 8.21e-44 140 85 0 78 3 hfq RNA-binding protein Hfq Aliivibrio salmonicida (strain LFI1238)
Q0HR42 1.34e-43 139 76 1 94 3 hfq RNA-binding protein Hfq Shewanella sp. (strain MR-7)
Q0HMN9 1.34e-43 139 76 1 94 3 hfq RNA-binding protein Hfq Shewanella sp. (strain MR-4)
A0KSR7 1.34e-43 139 76 1 94 3 hfq RNA-binding protein Hfq Shewanella sp. (strain ANA-3)
Q8EJ69 1.34e-43 139 76 1 94 3 hfq RNA-binding protein Hfq Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
A9L3V9 2.82e-43 138 89 1 76 3 hfq RNA-binding protein Hfq Shewanella baltica (strain OS195)
A6WSV2 2.82e-43 138 89 1 76 3 hfq RNA-binding protein Hfq Shewanella baltica (strain OS185)
A3D024 2.82e-43 138 89 1 76 3 hfq RNA-binding protein Hfq Shewanella baltica (strain OS155 / ATCC BAA-1091)
B8ECA3 2.82e-43 138 89 1 76 3 hfq RNA-binding protein Hfq Shewanella baltica (strain OS223)
A1RFR7 4.19e-43 138 76 1 94 3 hfq RNA-binding protein Hfq Shewanella sp. (strain W3-18-1)
A4YAK9 4.19e-43 138 76 1 94 3 hfq RNA-binding protein Hfq Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Q12J95 9.15e-43 137 85 1 80 3 hfq RNA-binding protein Hfq Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Q15NR0 2.37e-42 136 81 2 83 3 hfq RNA-binding protein Hfq Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
Q3J803 2.48e-42 136 84 0 77 3 hfq RNA-binding protein Hfq Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107)
A4XPY7 5.35e-42 135 78 1 88 3 hfq RNA-binding protein Hfq Pseudomonas mendocina (strain ymp)
Q5GYM1 8.31e-42 135 71 1 96 3 hfq RNA-binding protein Hfq Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)
Q2P1M4 8.31e-42 135 71 1 96 3 hfq RNA-binding protein Hfq Xanthomonas oryzae pv. oryzae (strain MAFF 311018)
Q3BUR4 8.31e-42 135 71 1 96 3 hfq RNA-binding protein Hfq Xanthomonas euvesicatoria pv. vesicatoria (strain 85-10)
Q8PLQ4 8.31e-42 135 71 1 96 3 hfq RNA-binding protein Hfq Xanthomonas axonopodis pv. citri (strain 306)
Q8P9X7 1.13e-41 134 71 1 96 3 hfq RNA-binding protein Hfq Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
B0RTY9 1.13e-41 134 71 1 96 3 hfq RNA-binding protein Hfq Xanthomonas campestris pv. campestris (strain B100)
Q4UTQ8 1.13e-41 134 71 1 96 3 hfq RNA-binding protein Hfq Xanthomonas campestris pv. campestris (strain 8004)
Q9PH57 1.19e-41 134 80 0 82 3 hfq RNA-binding protein Hfq Xylella fastidiosa (strain 9a5c)
Q48A22 1.26e-41 134 78 0 82 3 hfq RNA-binding protein Hfq Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
B2FL26 1.37e-41 134 73 1 93 3 hfq RNA-binding protein Hfq Stenotrophomonas maltophilia (strain K279a)
B4SRA5 1.37e-41 134 73 1 93 3 hfq RNA-binding protein Hfq Stenotrophomonas maltophilia (strain R551-3)
C1DLQ2 3.12e-41 133 77 1 88 3 hfq RNA-binding protein Hfq Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
Q5QW99 3.58e-41 133 93 0 66 3 hfq RNA-binding protein Hfq Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
Q9HUM0 5.8e-41 132 81 0 80 1 hfq RNA-binding protein Hfq Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q02F74 5.8e-41 132 81 0 80 3 hfq RNA-binding protein Hfq Pseudomonas aeruginosa (strain UCBPP-PA14)
B7V207 5.8e-41 132 81 0 80 3 hfq RNA-binding protein Hfq Pseudomonas aeruginosa (strain LESB58)
A6VD57 5.8e-41 132 81 0 80 1 hfq RNA-binding protein Hfq Pseudomonas aeruginosa (strain PA7)
B8GNC7 6.25e-41 132 88 0 68 3 hfq RNA-binding protein Hfq Thioalkalivibrio sulfidiphilus (strain HL-EbGR7)
A1SZL0 1.04e-40 131 88 0 69 3 hfq RNA-binding protein Hfq Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37)
Q87F71 1.85e-40 131 78 0 82 3 hfq RNA-binding protein Hfq Xylella fastidiosa (strain Temecula1 / ATCC 700964)
B0U1E7 1.85e-40 131 78 0 82 3 hfq RNA-binding protein Hfq Xylella fastidiosa (strain M12)
B2I691 1.85e-40 131 78 0 82 3 hfq RNA-binding protein Hfq Xylella fastidiosa (strain M23)
A4VQP0 2.13e-40 131 91 0 68 3 hfq RNA-binding protein Hfq Stutzerimonas stutzeri (strain A1501)
C5BRH7 2.59e-40 131 88 0 68 3 hfq RNA-binding protein Hfq Teredinibacter turnerae (strain ATCC 39867 / T7901)
Q2SBC2 2.63e-40 130 80 1 80 3 hfq RNA-binding protein Hfq Hahella chejuensis (strain KCTC 2396)
Q21HA2 2.84e-40 130 88 0 68 3 hfq RNA-binding protein Hfq Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)
B3PDC1 4.05e-40 130 68 1 96 3 hfq RNA-binding protein Hfq Cellvibrio japonicus (strain Ueda107)
Q1I449 7.29e-40 130 88 0 68 3 hfq RNA-binding protein Hfq Pseudomonas entomophila (strain L48)
B3EWP0 1.21e-39 129 80 0 80 1 hfq RNA-binding protein Hfq Pseudomonas aeruginosa
Q88DD3 1.49e-39 129 72 1 88 3 hfq RNA-binding protein Hfq Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
A5W9T0 1.49e-39 129 72 1 88 3 hfq RNA-binding protein Hfq Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
Q3IDT7 1.64e-39 129 84 0 71 3 hfq RNA-binding protein Hfq Pseudoalteromonas translucida (strain TAC 125)
A6VYL6 1.83e-39 128 89 0 68 3 hfq RNA-binding protein Hfq Marinomonas sp. (strain MWYL1)
Q8D317 2.59e-39 128 73 2 89 3 hfq RNA-binding protein Hfq Wigglesworthia glossinidia brevipalpis
B0KKZ5 3.58e-39 128 82 0 74 3 hfq RNA-binding protein Hfq Pseudomonas putida (strain GB-1)
B1JAD4 4.03e-39 128 86 0 68 3 hfq RNA-binding protein Hfq Pseudomonas putida (strain W619)
Q47BS1 4.6e-39 127 88 0 67 3 hfq RNA-binding protein Hfq Dechloromonas aromatica (strain RCB)
C1DD48 5.88e-39 127 77 0 80 3 hfq RNA-binding protein Hfq Laribacter hongkongensis (strain HLHK9)
A1U4C5 6.91e-39 127 88 0 68 3 hfq RNA-binding protein Hfq Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8)
Q1QY26 8.42e-39 127 89 0 66 3 hfq RNA-binding protein Hfq Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11)
Q0AB60 1.35e-38 126 88 0 68 3 hfq RNA-binding protein Hfq Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)
Q4ZYY0 1.41e-38 126 72 1 88 3 hfq RNA-binding protein Hfq Pseudomonas syringae pv. syringae (strain B728a)
Q87VJ4 1.41e-38 126 72 1 88 3 hfq RNA-binding protein Hfq Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q48P02 1.41e-38 126 72 1 88 3 hfq RNA-binding protein Hfq Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
A1K3Z4 1.46e-38 126 82 0 73 3 hfq RNA-binding protein Hfq Azoarcus sp. (strain BH72)
Q0BEX2 1.76e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia ambifaria (strain ATCC BAA-244 / DSM 16087 / CCUG 44356 / LMG 19182 / AMMD)
B1YR39 1.76e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia ambifaria (strain MC40-6)
B2JIU6 1.81e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Q2SWD9 1.95e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
Q63US8 1.95e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Burkholderia pseudomallei (strain K96243)
A3NA48 1.95e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Burkholderia pseudomallei (strain 668)
A3NVW5 1.95e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Burkholderia pseudomallei (strain 1106a)
A1V4J5 1.95e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Burkholderia mallei (strain SAVP1)
Q62JW9 1.95e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Burkholderia mallei (strain ATCC 23344)
A2S2A7 1.95e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Burkholderia mallei (strain NCTC 10229)
A3MK69 1.95e-38 126 80 0 72 3 hfq RNA-binding protein Hfq Burkholderia mallei (strain NCTC 10247)
Q13X33 1.96e-38 125 80 0 72 3 hfq RNA-binding protein Hfq Paraburkholderia xenovorans (strain LB400)
B2SXS5 1.96e-38 125 80 0 72 3 hfq RNA-binding protein Hfq Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)
A4JEN5 1.97e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia vietnamiensis (strain G4 / LMG 22486)
Q1BGW9 1.97e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia orbicola (strain AU 1054)
B1JT87 1.97e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia orbicola (strain MC0-3)
A9AH01 1.97e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia multivorans (strain ATCC 17616 / 249)
Q39FR4 1.97e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)
B4EAW4 1.97e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
A0K7T1 1.97e-38 126 81 0 71 3 hfq RNA-binding protein Hfq Burkholderia cenocepacia (strain HI2424)
Q606N3 2.22e-38 125 72 1 81 3 hfq RNA-binding protein Hfq Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
C4K3V5 3.2e-38 125 75 2 82 3 hfq RNA-binding protein Hfq Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)
Q5P7B8 6.31e-38 124 86 0 67 3 hfq RNA-binding protein Hfq Aromatoleum aromaticum (strain DSM 19018 / LMG 30748 / EbN1)
A1WUT6 7.68e-38 125 83 0 68 3 hfq RNA-binding protein Hfq Halorhodospira halophila (strain DSM 244 / SL1)
Q7NS93 8.51e-38 124 83 0 68 3 hfq RNA-binding protein Hfq Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)
Q21W33 9.03e-38 124 75 0 78 3 hfq RNA-binding protein Hfq Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)
Q493V9 1.05e-37 124 73 0 79 3 hfq RNA-binding protein Hfq Blochmanniella pennsylvanica (strain BPEN)
Q3KIY9 1.22e-37 124 73 2 88 3 hfq RNA-binding protein Hfq Pseudomonas fluorescens (strain Pf0-1)
Q0VME7 1.37e-37 124 86 0 66 3 hfq RNA-binding protein Hfq Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2)
Q1LSQ5 1.54e-37 124 79 0 72 3 hfq RNA-binding protein Hfq Baumannia cicadellinicola subsp. Homalodisca coagulata
Q4KJ73 1.75e-37 124 71 1 88 3 hfq RNA-binding protein Hfq Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
A5EVF4 1.95e-37 124 84 0 66 3 hfq RNA-binding protein Hfq Dichelobacter nodosus (strain VCS1703A)
B1XXK8 2.1e-37 123 81 0 70 3 hfq RNA-binding protein Hfq Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6)
Q2KYA0 2.19e-37 123 85 0 67 3 hfq RNA-binding protein Hfq Bordetella avium (strain 197N)
A9BMU8 2.61e-37 123 86 0 66 3 hfq RNA-binding protein Hfq Delftia acidovorans (strain DSM 14801 / SPH-1)
A1TM32 5.38e-37 122 85 0 67 3 hfq RNA-binding protein Hfq Paracidovorax citrulli (strain AAC00-1)
A1W582 6.69e-37 122 85 0 67 3 hfq RNA-binding protein Hfq Acidovorax sp. (strain JS42)
B9MFY1 6.69e-37 122 85 0 67 3 hfq RNA-binding protein Hfq Acidovorax ebreus (strain TPSY)
Q12AC3 7.72e-37 122 85 0 67 3 hfq RNA-binding protein Hfq Polaromonas sp. (strain JS666 / ATCC BAA-500)
C3KDW3 8.06e-37 122 85 0 68 3 hfq RNA-binding protein Hfq Pseudomonas fluorescens (strain SBW25)
Q7VWL6 9.2e-37 122 83 0 67 3 hfq RNA-binding protein Hfq Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q7W6Q2 9.2e-37 122 83 0 67 3 hfq RNA-binding protein Hfq Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Q7WHN6 9.2e-37 122 83 0 67 3 hfq RNA-binding protein Hfq Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
A9IK70 1e-36 121 83 0 67 3 hfq RNA-binding protein Hfq Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
A6SZW5 1.57e-36 121 83 0 67 3 hfq RNA-binding protein Hfq Janthinobacterium sp. (strain Marseille)
A4G4K7 1.66e-36 121 83 0 67 3 hfq RNA-binding protein Hfq Herminiimonas arsenicoxydans
C5CXH1 1.71e-36 121 73 0 78 3 hfq RNA-binding protein Hfq Variovorax paradoxus (strain S110)
Q1H0Y0 1.77e-36 121 74 1 79 3 hfq RNA-binding protein Hfq Methylobacillus flagellatus (strain ATCC 51484 / DSM 6875 / VKM B-1610 / KT)
Q8Y025 1.97e-36 120 74 0 75 3 hfq RNA-binding protein Hfq Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
B3R1J7 3.09e-36 120 83 0 67 3 hfq RNA-binding protein Hfq Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CCUG 44338 / CIP 107171 / LMG 19424 / R1)
Q1LLJ6 4.11e-36 120 83 0 67 3 hfq RNA-binding protein Hfq Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Q46ZI8 4.3e-36 120 83 0 67 3 hfq RNA-binding protein Hfq Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
B2U9V4 5.78e-36 119 83 0 67 3 hfq RNA-binding protein Hfq Ralstonia pickettii (strain 12J)
Q5F9R5 9.32e-36 119 78 2 74 3 hfq RNA-binding protein Hfq Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
P64345 1.09e-35 119 78 2 74 1 hfq RNA-binding protein Hfq Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P64344 1.09e-35 119 78 2 74 3 hfq RNA-binding protein Hfq Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
A1KT11 1.16e-35 119 78 2 74 1 hfq RNA-binding protein Hfq Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18)
Q2YBW6 1.18e-35 119 80 0 68 3 hfq RNA-binding protein Hfq Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71)
Q82V23 1.22e-35 119 77 0 68 3 hfq RNA-binding protein Hfq Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
A1WE11 2.57e-35 118 72 1 80 3 hfq RNA-binding protein Hfq Verminephrobacter eiseniae (strain EF01-2)
Q0K967 5.6e-35 117 82 0 67 3 hfq RNA-binding protein Hfq Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
B0TZB1 1.96e-33 114 61 1 86 3 hfq RNA-binding protein Hfq Francisella philomiragia subsp. philomiragia (strain ATCC 25017 / CCUG 19701 / FSC 153 / O#319-036)
Q0AHG1 2.15e-33 113 75 0 68 3 hfq RNA-binding protein Hfq Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57)
A4IYB0 2.6e-33 114 73 0 68 3 hfq RNA-binding protein Hfq Francisella tularensis subsp. tularensis (strain WY96-3418)
Q0BM86 2.6e-33 114 73 0 68 3 hfq RNA-binding protein Hfq Francisella tularensis subsp. holarctica (strain OSU18)
A0Q6S3 2.6e-33 114 73 0 68 3 hfq RNA-binding protein Hfq Francisella tularensis subsp. novicida (strain U112)
Q2A3T5 2.6e-33 114 73 0 68 3 hfq RNA-binding protein Hfq Francisella tularensis subsp. holarctica (strain LVS)
A7NBS2 2.6e-33 114 73 0 68 3 hfq RNA-binding protein Hfq Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA)
Q5NH41 2.87e-33 114 73 0 68 3 hfq RNA-binding protein Hfq Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
Q14IJ3 2.87e-33 114 73 0 68 3 hfq RNA-binding protein Hfq Francisella tularensis subsp. tularensis (strain FSC 198)
B2SG24 3.95e-33 113 73 0 68 3 hfq RNA-binding protein Hfq Francisella tularensis subsp. mediasiatica (strain FSC147)
Q5X0L0 4.77e-32 110 72 0 68 3 hfq RNA-binding protein Hfq Legionella pneumophila (strain Lens)
Q5ZZK1 4.77e-32 110 72 0 68 3 hfq RNA-binding protein Hfq Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
A5I9G0 4.77e-32 110 72 0 68 3 hfq RNA-binding protein Hfq Legionella pneumophila (strain Corby)
Q5X982 4.77e-32 110 72 0 68 3 hfq RNA-binding protein Hfq Legionella pneumophila (strain Paris)
Q31GP2 3.88e-30 105 66 0 66 3 hfq RNA-binding protein Hfq Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2)
Q3SIN9 9.67e-27 96 66 2 71 3 hfq RNA-binding protein Hfq Thiobacillus denitrificans (strain ATCC 25259)
Q1GGX7 5.43e-23 87 52 1 74 3 hfq RNA-binding protein Hfq Ruegeria sp. (strain TM1040)
Q5LRP4 6.76e-23 87 52 1 74 3 hfq RNA-binding protein Hfq Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
Q165Q6 7.97e-23 86 59 1 66 3 hfq RNA-binding protein Hfq Roseobacter denitrificans (strain ATCC 33942 / OCh 114)
Q0APP7 1.12e-22 86 55 1 68 3 hfq RNA-binding protein Hfq Maricaulis maris (strain MCS10)
Q28Q51 1.18e-22 86 59 1 66 3 hfq RNA-binding protein Hfq Jannaschia sp. (strain CCS1)
A1B9J4 4.21e-22 84 57 1 66 3 hfq RNA-binding protein Hfq Paracoccus denitrificans (strain Pd 1222)
A4WSM3 4.21e-22 84 55 1 69 3 hfq RNA-binding protein Hfq Cereibacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
Q3J2L7 4.21e-22 84 55 1 69 3 hfq RNA-binding protein Hfq Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
A3PJP5 4.21e-22 84 55 1 69 3 hfq RNA-binding protein Hfq Cereibacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)
B8GW92 5.03e-22 84 55 1 67 3 hfq RNA-binding protein Hfq Caulobacter vibrioides (strain NA1000 / CB15N)
Q9A7H8 5.03e-22 84 55 1 67 1 hfq RNA-binding protein Hfq Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
B1I296 5.28e-22 84 53 3 82 3 hfq RNA-binding protein Hfq Desulforudis audaxviator (strain MP104C)
B0SXF2 5.67e-22 84 55 1 67 3 hfq RNA-binding protein Hfq Caulobacter sp. (strain K31)
B0SJ28 6.22e-22 84 44 1 81 3 hfq RNA-binding protein Hfq Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)
B0SBH9 6.22e-22 84 44 1 81 3 hfq RNA-binding protein Hfq Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames)
Q0C0N8 8.23e-22 84 57 1 68 3 hfq RNA-binding protein Hfq Hyphomonas neptunium (strain ATCC 15444)
B0UIY3 2.45e-21 83 53 1 67 3 hfq RNA-binding protein Hfq Methylobacterium sp. (strain 4-46)
B8IDE7 2.45e-21 83 53 1 67 3 hfq RNA-binding protein Hfq Methylobacterium nodulans (strain LMG 21967 / CNCM I-2342 / ORS 2060)
B1M597 3.07e-21 82 53 1 67 3 hfq RNA-binding protein Hfq Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831 / NBRC 15690 / NCIMB 10815 / 0-1)
B1ZEN4 4.43e-21 82 53 1 67 3 hfq RNA-binding protein Hfq Methylorubrum populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)
A9W6K8 4.43e-21 82 53 1 67 3 hfq RNA-binding protein Hfq Methylorubrum extorquens (strain PA1)
B7KRF3 4.43e-21 82 53 1 67 3 hfq RNA-binding protein Hfq Methylorubrum extorquens (strain CM4 / NCIMB 13688)
B6JDZ0 4.43e-21 82 52 1 68 3 hfq RNA-binding protein Hfq Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)
Q3ACA9 5.25e-21 82 46 2 83 3 hfq RNA-binding protein Hfq Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901)
Q2W4P9 5.51e-21 82 55 1 68 3 hfq RNA-binding protein Hfq Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1)
B8ELB8 5.73e-21 82 53 1 67 3 hfq RNA-binding protein Hfq Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2)
Q98MX2 6.26e-21 82 53 1 67 3 hfq RNA-binding protein Hfq Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
P0A3G8 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella suis biovar 1 (strain 1330)
B0CGR3 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella suis (strain ATCC 23445 / NCTC 10510)
A5VQN6 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
P0A3G7 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
C0RJ83 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella melitensis biotype 2 (strain ATCC 23457)
A9M5C4 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella canis (strain ATCC 23365 / NCTC 10854 / RM-666)
P0C107 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella abortus biovar 1 (strain 9-941)
A6X120 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)
Q2YPW9 7.19e-21 81 52 1 67 1 hfq RNA-binding protein Hfq Brucella abortus (strain 2308)
B2S5W3 7.19e-21 81 52 1 67 3 hfq RNA-binding protein Hfq Brucella abortus (strain S19)
Q11HW7 9.53e-21 81 53 1 67 3 hfq RNA-binding protein Hfq Chelativorans sp. (strain BNC1)
B2IB74 1.4e-20 81 53 1 67 3 hfq RNA-binding protein Hfq Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB 8712)
Q43971 1.4e-20 81 53 1 67 3 hfq RNA-binding protein Hfq Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
A4YUP3 1.66e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Bradyrhizobium sp. (strain ORS 278)
A5EIZ5 1.66e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
C1F408 1.68e-20 81 53 1 67 3 hfq RNA-binding protein Hfq Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / BCRC 80197 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161)
B3QIM2 2.55e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Rhodopseudomonas palustris (strain TIE-1)
Q6N6L8 2.55e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Q137B6 2.58e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Rhodopseudomonas palustris (strain BisB5)
Q214Q4 2.58e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Rhodopseudomonas palustris (strain BisB18)
Q07MY5 2.58e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Rhodopseudomonas palustris (strain BisA53)
Q2IW30 2.88e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Rhodopseudomonas palustris (strain HaA2)
Q89LQ2 3.1e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
A6U8G6 3.28e-20 80 47 1 72 3 hfq RNA-binding protein Hfq Sinorhizobium medicae (strain WSM419)
C3MBM0 3.28e-20 80 47 1 72 3 hfq RNA-binding protein Hfq Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q92Q84 3.28e-20 80 47 1 72 3 hfq RNA-binding protein Hfq Rhizobium meliloti (strain 1021)
Q3SSN1 3.82e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255)
Q1QM92 3.82e-20 80 52 1 67 3 hfq RNA-binding protein Hfq Nitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14)
A9HLS1 4.56e-20 80 56 2 71 3 hfq RNA-binding protein Hfq Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5)
Q2RJF9 5.41e-20 79 55 1 65 3 hfq RNA-binding protein Hfq Moorella thermoacetica (strain ATCC 39073 / JCM 9320)
A5D2K8 7.4e-20 79 54 2 71 3 hfq RNA-binding protein Hfq Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
Q0BT31 8.66e-20 79 53 1 67 3 hfq RNA-binding protein Hfq Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Q8UFE8 9.17e-20 79 49 1 67 3 hfq RNA-binding protein Hfq Agrobacterium fabrum (strain C58 / ATCC 33970)
B5ZND2 9.28e-20 79 49 1 67 3 hfq RNA-binding protein Hfq Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Q1MGZ1 9.28e-20 79 49 1 67 3 hfq RNA-binding protein Hfq Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
Q2K8U6 9.28e-20 79 49 1 67 3 hfq RNA-binding protein Hfq Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)
B3PYU7 9.28e-20 79 49 1 67 3 hfq RNA-binding protein Hfq Rhizobium etli (strain CIAT 652)
B9JF08 1.1e-19 78 49 1 67 3 hfq RNA-binding protein Hfq Rhizobium rhizogenes (strain K84 / ATCC BAA-868)
Q2RTR1 1.16e-19 79 53 1 67 3 hfq RNA-binding protein Hfq Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1)
Q6G014 1.17e-19 78 50 1 67 3 hfq RNA-binding protein Hfq Bartonella quintana (strain Toulouse)
Q6G3L8 1.43e-19 78 50 1 67 3 hfq RNA-binding protein Hfq Bartonella henselae (strain ATCC 49882 / DSM 28221 / CCUG 30454 / Houston 1)
Q0AYA9 1.55e-19 78 47 2 71 3 hfq RNA-binding protein Hfq Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
C0ZEY6 1.59e-19 78 49 1 79 3 hfq RNA-binding protein Hfq Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599)
A4J5Q0 1.64e-19 78 52 2 71 3 hfq RNA-binding protein Hfq Desulforamulus reducens (strain ATCC BAA-1160 / DSM 100696 / MI-1)
A9IVD2 1.84e-19 78 50 1 67 3 hfq RNA-binding protein Hfq Bartonella tribocorum (strain CIP 105476 / IBS 506)
Q0STR1 1.99e-19 78 51 1 68 3 hfq RNA-binding protein Hfq Clostridium perfringens (strain SM101 / Type A)
A7HXU8 2.08e-19 78 52 1 67 3 hfq RNA-binding protein Hfq Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
A4XL44 2.16e-19 78 43 2 82 3 hfq RNA-binding protein Hfq Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331)
B9MJT7 3.76e-19 77 47 2 73 3 hfq RNA-binding protein Hfq Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / KCTC 15123 / Z-1320)
Q24X67 4.25e-19 77 53 1 65 3 hfq RNA-binding protein Hfq Desulfitobacterium hafniense (strain Y51)
B8FWE3 4.49e-19 77 53 1 65 3 hfq RNA-binding protein Hfq Desulfitobacterium hafniense (strain DSM 10664 / DCB-2)
Q8XL84 4.89e-19 77 53 1 64 3 hfq RNA-binding protein Hfq Clostridium perfringens (strain 13 / Type A)
Q0TRD3 4.89e-19 77 53 1 64 3 hfq RNA-binding protein Hfq Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
O66512 5.69e-19 77 60 1 60 1 hfq RNA-binding protein Hfq Aquifex aeolicus (strain VF5)
Q67NL2 1.06e-18 76 54 1 64 3 hfq RNA-binding protein Hfq Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T)
A1USH6 1.09e-18 76 44 1 76 3 hfq RNA-binding protein Hfq Bartonella bacilliformis (strain ATCC 35685 / KC583 / Herrer 020/F12,63)
Q8RA69 1.1e-18 76 50 1 64 3 hfq RNA-binding protein Hfq Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
B0K1A5 2.12e-18 75 49 1 65 3 hfq RNA-binding protein Hfq Thermoanaerobacter sp. (strain X514)
B0K9L8 2.12e-18 75 49 1 65 3 hfq RNA-binding protein Hfq Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)
B1KSA0 7.02e-18 74 50 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain Loch Maree / Type A3)
A7GE42 7.02e-18 74 50 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain Langeland / NCTC 10281 / Type F)
B1IM65 7.02e-18 74 50 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain Okra / Type B1)
C1FNT6 7.02e-18 74 50 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain Kyoto / Type A2)
A5I2R9 7.02e-18 74 50 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)
C3KX32 7.02e-18 74 50 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain 657 / Type Ba4)
A7FUK7 7.02e-18 74 50 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain ATCC 19397 / Type A)
B7IEU8 9.19e-18 73 52 1 65 3 hfq RNA-binding protein Hfq Thermosipho africanus (strain TCF52B)
A6LNU8 9.47e-18 73 51 1 66 3 hfq RNA-binding protein Hfq Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429)
A5N8I8 1.61e-17 73 43 1 73 3 hfq RNA-binding protein Hfq Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
B9E1Z3 1.61e-17 73 43 1 73 3 hfq RNA-binding protein Hfq Clostridium kluyveri (strain NBRC 12016)
Q187T2 1.76e-17 73 46 1 66 3 hfq RNA-binding protein Hfq Clostridioides difficile (strain 630)
A0Q0M9 2.54e-17 72 50 1 64 3 hfq RNA-binding protein Hfq Clostridium novyi (strain NT)
P58243 2.98e-17 72 45 1 64 3 hfq RNA-binding protein Hfq Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
A9VR02 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus mycoides (strain KBAB4)
Q6HF98 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q636W3 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain ZK / E33L)
Q81A74 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B9IUM6 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain Q1)
B7HKR8 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain AH187)
B7HCI2 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain B4264)
C1ENE6 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain 03BB102)
B7ISQ8 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain G9842)
Q733C0 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain ATCC 10987 / NRS 248)
B7JIE0 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus cereus (strain AH820)
Q81WX1 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus anthracis
A0RH87 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus thuringiensis (strain Al Hakam)
C3L887 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus anthracis (strain CDC 684 / NRRL 3495)
C3P4Y3 5.96e-17 71 48 1 70 3 hfq RNA-binding protein Hfq Bacillus anthracis (strain A0248)
B2A3Y0 6.14e-17 72 44 1 69 3 hfq RNA-binding protein Hfq Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)
Q9KAC4 8.22e-17 71 46 1 69 3 hfq RNA-binding protein Hfq Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q5WFY7 1.04e-16 71 46 1 64 3 hfq RNA-binding protein Hfq Shouchella clausii (strain KSM-K16)
B2V268 1.08e-16 71 46 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain Alaska E43 / Type E3)
A6TR76 2.72e-16 70 44 1 70 3 hfq RNA-binding protein Hfq Alkaliphilus metalliredigens (strain QYMF)
B1YMH1 3.01e-16 70 43 1 72 3 hfq RNA-binding protein Hfq Exiguobacterium sibiricum (strain DSM 17290 / CCUG 55495 / CIP 109462 / JCM 13490 / 255-15)
Q8F5Z7 3.45e-16 70 39 1 73 3 hfq RNA-binding protein Hfq Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
Q72Q67 3.45e-16 70 39 1 73 3 hfq RNA-binding protein Hfq Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
A5IJP8 3.6e-16 70 49 1 69 3 hfq RNA-binding protein Hfq Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1)
A7GR70 4.49e-16 69 45 1 70 3 hfq RNA-binding protein Hfq Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
Q04ZZ4 4.74e-16 69 39 1 73 3 hfq RNA-binding protein Hfq Leptospira borgpetersenii serovar Hardjo-bovis (strain L550)
Q04S67 4.74e-16 69 39 1 73 3 hfq RNA-binding protein Hfq Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
B2TIB6 4.91e-16 69 45 1 64 3 hfq RNA-binding protein Hfq Clostridium botulinum (strain Eklund 17B / Type B)
A8MFD1 4.91e-16 69 42 1 73 3 hfq RNA-binding protein Hfq Alkaliphilus oremlandii (strain OhILAs)
A8F5B4 5.18e-16 69 43 1 91 3 hfq RNA-binding protein Hfq Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO)
C4L1C0 6.22e-16 69 44 1 70 3 hfq RNA-binding protein Hfq Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
A6LWI9 8.23e-16 68 43 1 69 3 hfq RNA-binding protein Hfq Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
B1L8W9 1.03e-15 68 50 1 66 3 hfq RNA-binding protein Hfq Thermotoga sp. (strain RQ2)
Q5L0D8 1.08e-15 68 44 1 68 3 hfq RNA-binding protein Hfq Geobacillus kaustophilus (strain HTA426)
B8I2Q2 1.28e-15 68 47 1 65 3 hfq RNA-binding protein Hfq Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10)
Q9WYZ6 1.28e-15 68 47 1 69 1 hfq RNA-binding protein Hfq Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
A7HJA5 2.65e-15 67 45 2 70 3 hfq RNA-binding protein Hfq Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1)
O31796 4.06e-15 67 45 1 64 1 hfq RNA-binding protein Hfq Bacillus subtilis (strain 168)
Q65JA8 5.05e-15 66 43 1 67 3 hfq RNA-binding protein Hfq Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
B7GIA1 6.17e-15 66 42 1 70 3 hfq RNA-binding protein Hfq Anoxybacillus flavithermus (strain DSM 21510 / WK1)
Q8EQQ9 7.51e-15 66 41 1 70 3 hfq RNA-binding protein Hfq Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
A8FDJ0 1.41e-14 65 43 1 65 3 hfq RNA-binding protein Hfq Bacillus pumilus (strain SAFR-032)
A7Z501 2.06e-14 65 43 1 64 3 hfq RNA-binding protein Hfq Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
C5D9J0 2.19e-14 65 41 1 73 3 hfq RNA-binding protein Hfq Geobacillus sp. (strain WCH70)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16750
Feature type CDS
Gene hfq
Product RNA chaperone Hfq
Location 3692616 - 3692906 (strand: 1)
Length 291 (nucleotides) / 96 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1421
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF17209 Hfq protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1923 Signal transduction mechanisms (T) T sRNA-binding regulator protein Hfq

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03666 host factor-I protein Quorum sensing
RNA degradation
Biofilm formation - Vibrio cholerae		 -

Protein Sequence

MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNTGTNQAGTNYSGGNATQQDDVAE

Flanking regions ( +/- flanking 50bp)

TTCGAACCATTAGGTTCTAGTATAAAACAACAAAATAAGGAAAACATAGAATGGCTAAGGGGCAATCTTTGCAAGATCCTTTTCTGAACGCATTACGTCGTGAAAGGGTCCCTGTTTCAATCTATTTGGTAAACGGCATTAAATTACAGGGTCAGATCGAATCTTTTGACCAATTTGTTATTCTGCTGAAAAACACTGTTAGTCAGATGGTATACAAACATGCTATCTCTACCGTAGTACCTTCTCGTCCTGTTTCTCATCATAGCAATACAGGTACCAACCAAGCGGGTACAAACTACAGTGGCGGTAACGCGACTCAGCAGGATGATGTTGCAGAATAATTATCAAATATTATTCTTAATATAATAAAAACATAGGTAGGGAGACTTTA