K03666


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K03666
Protein list: lists the 7 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.

Description

External link K03666
KO K03666
Description host factor-I protein

KO part of 3 pathways

Quorum sensing
RNA degradation
Biofilm formation - Vibrio cholerae

KO part of 0 modules

Occurence in the database

K03666 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1421 FBDBKF_08455 71519 71824 1 hfq RNA chaperone Hfq Morganella morganii S1
1 group_1421 EHELCC_13070 91901 92206 -1 hfq RNA chaperone Hfq Morganella morganii S2
2 group_1421 NLDBIP_13410 91901 92206 -1 hfq RNA chaperone Hfq Morganella morganii S4
3 group_1421 LHKJJB_13145 70237 70542 1 hfq RNA chaperone Hfq Morganella morganii S3
4 group_1421 HKOGLL_11885 91901 92206 -1 hfq RNA chaperone Hfq Morganella morganii S5
5 group_1421 F4V73_RS09675 37731 38039 1 hfq RNA chaperone Hfq Morganella psychrotolerans
6 group_1421 PMI_RS16750 3692616 3692906 1 hfq RNA chaperone Hfq Proteus mirabilis HI4320