Orthogroup:group_1074


Homologs in group_1074

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06090 FBDBKF_06090 Morganella morganii S1 ygdD DUF423 domain-containing protein
EHELCC_09135 EHELCC_09135 Morganella morganii S2 ygdD DUF423 domain-containing protein
NLDBIP_09515 NLDBIP_09515 Morganella morganii S4 ygdD DUF423 domain-containing protein
LHKJJB_08240 LHKJJB_08240 Morganella morganii S3 ygdD DUF423 domain-containing protein
HKOGLL_07790 HKOGLL_07790 Morganella morganii S5 ygdD DUF423 domain-containing protein
F4V73_RS15820 F4V73_RS15820 Morganella psychrotolerans - DUF423 domain-containing protein
PMI_RS11360 PMI_RS11360 Proteus mirabilis HI4320 - DUF423 domain-containing protein

Distribution of group_1074 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1074 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1074

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1074.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ygdD 5
2 - 2

Product

# Product Occurence
1 DUF423 domain-containing protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2363 7 S Function unknown (S) Uncharacterized membrane protein YgdD, TMEM256/DUF423 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04241 7 Protein of unknown function (DUF423)

Annotations of the 22 SwissProt hits

Annotation Number of occurrences
Transmembrane protein 256 1
Transmembrane protein 256 homolog 1
UPF0382 inner membrane protein YgdD 4
UPF0382 membrane protein C1782.12c 1
UPF0382 membrane protein HI_1073 1
UPF0382 membrane protein MW0538 1
UPF0382 membrane protein SA0540 1
UPF0382 membrane protein SAB0533 1
UPF0382 membrane protein SACOL0629 1
UPF0382 membrane protein SAOUHSC_00567 1
UPF0382 membrane protein SAR0588 1
UPF0382 membrane protein SAS0541 1
UPF0382 membrane protein SAUSA300_0565 1
UPF0382 membrane protein SAV0583 1
UPF0382 membrane protein SERP0230 1
UPF0382 membrane protein SE_0353 1
UPF0382 membrane protein SH2409 1
UPF0382 membrane protein SSP2132 1
UPF0382 membrane protein YwdK 1

Protein length

Unique protein length 131

Protein length distribution