Homologs in group_2399

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19075 FBDBKF_19075 46.9 Morganella morganii S1 dprA DprA winged helix domain-containing protein
EHELCC_18820 EHELCC_18820 46.9 Morganella morganii S2 dprA DprA winged helix domain-containing protein
NLDBIP_18835 NLDBIP_18835 46.9 Morganella morganii S4 dprA DprA winged helix domain-containing protein
LHKJJB_18690 LHKJJB_18690 46.9 Morganella morganii S3 dprA DprA winged helix domain-containing protein
HKOGLL_18425 HKOGLL_18425 46.9 Morganella morganii S5 dprA DprA winged helix domain-containing protein
F4V73_RS19090 F4V73_RS19090 49.2 Morganella psychrotolerans dprA DNA-processing protein DprA

Distribution of the homologs in the orthogroup group_2399

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2399

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P30852 1.24e-83 262 38 4 386 3 smf Protein Smf Escherichia coli (strain K12)
P43862 8.77e-69 224 48 1 256 3 dprA DNA-processing protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39813 6.99e-50 172 42 1 209 1 dprA DNA processing protein DprA Bacillus subtilis (strain 168)
Q8DPI7 3.25e-48 168 40 1 205 1 dprA DNA processing protein DprA Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P73345 2.58e-45 163 42 1 215 3 smf Protein Smf Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P9WL29 9.1e-33 129 30 3 290 1 dprA Putative DNA processing protein DprA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WL28 9.1e-33 129 30 3 290 3 dprA Putative DNA processing protein DprA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q44773 3.92e-24 104 30 3 221 3 smf Protein Smf Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16315
Feature type CDS
Gene dprA
Product DNA-processing protein DprA
Location 3602001 - 3603161 (strand: 1)
Length 1161 (nucleotides) / 386 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2399
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02481 DNA recombination-mediator protein A
PF17782 DprA winged helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0758 Replication, recombination and repair (L) L Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04096 DNA processing protein - -

Protein Sequence

MDAREIWIRLNVVSRLPVNKAIKVVEYLQSLTQLNRKVLLECGLSEQQSHQFMRLQANCVKSTLKWLDKNESSLLTISDSDYPLLLKQISSPPLLLFVAGNKEHLKSTQIALIGSRDATQYGTKWATYFAQQLVKNKFTITSGLAQGIDGVGHRSALKHHGVTIAVLGSGLEQIYPSFHRRLAEQIKESGVLVSEHLPMAPPLARHFPQRNRIISGLSSALLIVEAGIKSGSLITANYALQQGKELFVLPGLLGDSHFEGNHQLLKQGANLASSPDDIMEYLNSSLQWLIFNHNDDLQDEHIAEVGSATNNKKESSNMPLEIEKLTPTQQQSINLILPLLGFDKAIPIDIIANKSGLSTSDLAPLLLELELIEKVAIVAGGYIRLE

Flanking regions ( +/- flanking 50bp)

CTGAGTTTAGCACTCACCTTGTATGTTAAAAAATAACACTAGGATAATGCATGGATGCCAGAGAAATATGGATAAGACTTAATGTTGTTTCAAGATTGCCAGTAAATAAAGCGATTAAGGTGGTGGAATACTTACAATCATTGACGCAACTAAATCGTAAAGTGTTACTAGAATGTGGCCTATCAGAACAACAAAGTCACCAATTTATGAGGCTTCAGGCAAATTGTGTCAAAAGTACATTAAAGTGGCTAGATAAAAATGAATCATCACTCTTAACAATTTCTGATTCAGATTATCCTTTGCTATTAAAACAAATATCTTCTCCACCTCTTTTGCTTTTTGTTGCAGGTAATAAAGAGCATTTAAAAAGCACACAAATTGCATTAATTGGTAGTAGAGATGCTACACAGTATGGAACTAAGTGGGCGACTTATTTTGCACAACAGCTCGTGAAAAATAAATTCACAATTACAAGCGGGTTGGCGCAAGGGATTGATGGTGTTGGACATCGTAGTGCTTTAAAACATCATGGCGTCACTATTGCTGTATTAGGGAGTGGTTTAGAACAAATTTACCCATCATTTCATCGTCGACTAGCAGAGCAAATCAAAGAGTCGGGTGTTCTTGTTTCAGAGCATCTCCCGATGGCACCTCCTTTAGCTCGTCATTTCCCGCAAAGGAATAGAATTATTAGTGGATTGAGTTCAGCTCTCTTAATTGTAGAAGCTGGCATAAAAAGTGGATCTTTAATCACTGCCAATTATGCTCTACAACAAGGCAAAGAATTGTTTGTGTTACCCGGATTACTCGGTGATTCACACTTTGAAGGAAATCATCAGTTGCTAAAACAGGGGGCGAATTTAGCCTCTTCGCCAGATGATATTATGGAATATTTAAATAGCTCTTTGCAGTGGTTAATCTTTAATCATAATGATGATTTACAGGACGAGCATATCGCAGAGGTTGGCTCAGCTACCAACAATAAAAAAGAGTCCAGCAATATGCCATTAGAAATTGAAAAACTTACACCCACTCAACAGCAATCAATAAATTTGATATTGCCTTTGTTAGGTTTTGATAAAGCTATCCCGATTGATATTATTGCGAATAAGAGCGGTTTATCCACATCAGATTTAGCTCCTCTTTTATTAGAGCTTGAGCTTATCGAAAAAGTCGCTATTGTGGCGGGTGGCTATATTCGATTGGAATAAGTGTTATGAGGTAAGACAATGGCAAAAATAATGCCGTTTACGTATCCATC