COG0758


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0758, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG0758 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2365 FBDBKF_19075 3150 3986 -1 dprA DprA winged helix domain-containing protein Morganella morganii S1
1 group_2365 EHELCC_18820 3150 3986 -1 dprA DprA winged helix domain-containing protein Morganella morganii S2
2 group_2365 NLDBIP_18835 3150 3986 -1 dprA DprA winged helix domain-containing protein Morganella morganii S4
3 group_2365 LHKJJB_18690 3150 3986 -1 dprA DprA winged helix domain-containing protein Morganella morganii S3
4 group_2365 HKOGLL_18425 3150 3986 -1 dprA DprA winged helix domain-containing protein Morganella morganii S5
5 group_2365 F4V73_RS19090 26408 27523 1 dprA DNA-processing protein DprA Morganella psychrotolerans
6 group_2365 PMI_RS16315 3602001 3603161 1 dprA DNA-processing protein DprA Proteus mirabilis HI4320