Homologs in group_2365

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19075 FBDBKF_19075 100.0 Morganella morganii S1 dprA DprA winged helix domain-containing protein
EHELCC_18820 EHELCC_18820 100.0 Morganella morganii S2 dprA DprA winged helix domain-containing protein
LHKJJB_18690 LHKJJB_18690 100.0 Morganella morganii S3 dprA DprA winged helix domain-containing protein
HKOGLL_18425 HKOGLL_18425 100.0 Morganella morganii S5 dprA DprA winged helix domain-containing protein
F4V73_RS19090 F4V73_RS19090 80.9 Morganella psychrotolerans dprA DNA-processing protein DprA
PMI_RS16315 PMI_RS16315 46.9 Proteus mirabilis HI4320 dprA DNA-processing protein DprA

Distribution of the homologs in the orthogroup group_2365

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2365

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43862 3.65e-42 151 44 1 172 3 dprA DNA-processing protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P30852 8.73e-39 142 40 3 215 3 smf Protein Smf Escherichia coli (strain K12)
P30852 1.25e-13 73 45 2 92 3 smf Protein Smf Escherichia coli (strain K12)
P39813 5.35e-25 104 39 1 133 1 dprA DNA processing protein DprA Bacillus subtilis (strain 168)
Q8DPI7 4.52e-23 98 43 1 122 1 dprA DNA processing protein DprA Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P73345 9.16e-22 97 40 1 123 3 smf Protein Smf Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P9WL29 6.76e-15 77 40 1 112 1 dprA Putative DNA processing protein DprA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WL28 6.76e-15 77 40 1 112 3 dprA Putative DNA processing protein DprA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q44773 3.69e-13 71 32 1 123 3 smf Protein Smf Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_18835
Feature type CDS
Gene dprA
Product DprA winged helix domain-containing protein
Location 3150 - 3986 (strand: -1)
Length 837 (nucleotides) / 278 (amino acids)

Contig

Accession ZDB_544
Length 24827 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2365
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02481 DNA recombination-mediator protein A
PF17782 DprA winged helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0758 Replication, recombination and repair (L) L Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04096 DNA processing protein - -

Protein Sequence

MDEREIWLRLACIRRLSAHHAVSAATILTETCTQKNGEIRQQLHQCGLTLVQCQQFMNVNTSRLKTALIWADLPGNMILPLSSPHYPFLLKQIYSPPLVLFVAGQCEALSAPQVSMVGSRAVTHYGEKWADCFTQHLVQHNLVITSGLAAGVDGCCHKAALASGGKTVAVSGSGLSHIYPAKHRSLAVEITENGALISEYFPDVPPLIPETPEVIITPVQEELPFAHVLINVDDEPTPADIIAARCELPVTEVTTQLLQLELSGKIAVVSGGYIRLHH

Flanking regions ( +/- flanking 50bp)

GCCCGCAGCGGACACCGCATTTTTATCACAGGCTCAGTCGGGATGGCGCAATGGATGAAAGGGAAATTTGGTTACGTCTGGCGTGTATCAGGCGGTTAAGTGCACATCATGCTGTCAGTGCTGCCACTATACTGACAGAGACCTGCACACAGAAAAACGGTGAGATTCGTCAGCAGCTGCATCAGTGCGGACTCACACTGGTGCAGTGTCAGCAATTTATGAATGTGAATACATCCAGGCTGAAAACGGCACTTATATGGGCTGATTTACCGGGTAACATGATATTACCCCTGTCATCACCACACTATCCGTTTTTATTAAAGCAGATCTATTCCCCCCCGCTTGTGCTTTTTGTGGCAGGGCAGTGTGAGGCGTTATCTGCCCCGCAGGTCAGTATGGTGGGCAGCCGTGCAGTTACCCATTACGGCGAAAAGTGGGCGGACTGTTTTACCCAGCATCTTGTGCAGCACAATCTGGTGATAACCAGCGGTCTGGCTGCGGGAGTGGACGGATGCTGCCATAAGGCGGCGCTGGCATCAGGCGGAAAGACGGTTGCGGTATCCGGCAGCGGGTTATCTCATATTTATCCCGCAAAGCACCGGTCTCTGGCAGTGGAGATTACAGAAAATGGCGCACTTATCTCCGAATATTTTCCTGATGTGCCGCCGCTGATCCCGGAAACACCGGAAGTGATCATCACACCGGTACAGGAGGAACTGCCGTTTGCACATGTGCTGATTAATGTGGATGATGAACCGACACCGGCGGATATTATTGCCGCGCGGTGTGAGCTGCCGGTCACGGAGGTGACAACACAACTGCTGCAGCTGGAGTTATCAGGTAAAATAGCCGTGGTCAGCGGGGGATACATCCGCCTGCATCACTGAACGGTATCGGCGTAAGGTAAAATTATCATGTCAAAATCAATGGCGGAATG