Homologs in group_2365

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19075 FBDBKF_19075 80.9 Morganella morganii S1 dprA DprA winged helix domain-containing protein
EHELCC_18820 EHELCC_18820 80.9 Morganella morganii S2 dprA DprA winged helix domain-containing protein
NLDBIP_18835 NLDBIP_18835 80.9 Morganella morganii S4 dprA DprA winged helix domain-containing protein
LHKJJB_18690 LHKJJB_18690 80.9 Morganella morganii S3 dprA DprA winged helix domain-containing protein
HKOGLL_18425 HKOGLL_18425 80.9 Morganella morganii S5 dprA DprA winged helix domain-containing protein
PMI_RS16315 PMI_RS16315 49.2 Proteus mirabilis HI4320 dprA DNA-processing protein DprA

Distribution of the homologs in the orthogroup group_2365

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2365

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P30852 2.31e-104 315 46 5 374 3 smf Protein Smf Escherichia coli (strain K12)
P43862 3.48e-68 222 44 3 281 3 dprA DNA-processing protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39813 1.43e-53 182 45 1 213 1 dprA DNA processing protein DprA Bacillus subtilis (strain 168)
Q8DPI7 1.84e-50 173 42 3 229 1 dprA DNA processing protein DprA Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P73345 2.69e-45 163 35 3 309 3 smf Protein Smf Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P9WL29 6.36e-26 110 39 1 193 1 dprA Putative DNA processing protein DprA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WL28 6.36e-26 110 39 1 193 3 dprA Putative DNA processing protein DprA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q44773 5.84e-24 103 33 1 173 3 smf Protein Smf Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19090
Feature type CDS
Gene dprA
Product DNA-processing protein DprA
Location 26408 - 27523 (strand: 1)
Length 1116 (nucleotides) / 371 (amino acids)

Contig

Accession term accessions NZ_VXKB01000011 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 30728 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2365
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02481 DNA recombination-mediator protein A
PF17782 DprA winged helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0758 Replication, recombination and repair (L) L Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04096 DNA processing protein - -

Protein Sequence

MDEKEIWLRLACIRRLSTHHAVSVAKTLTEICSQKKAQIQRQLHHCGLTLAQCQQFMNVNSSRLKTALLWTDLPGNSILPLSSPHYPFLLKQIYSPPTVLFVAGQCTELSAPQVSLVGSRATTHYGEKWAESFTRHLVQHDLVITSGLAAGIDGCCHRAALAAGGKTIAVLGSGLSHIYPARHRQLAETITEKGVLVSEYFPDIPPLAKNFPRRNRIISGLSRLLIVIEAGRRSGSLITAQCALEQGRDVFTLPAVLGHPAYEGNHWLLQQGAYIATAPSDITDHLALDMQWLPLPEIQKVKEIKEEEAIAEQEELPFAHVLINVDDEPTPPDVIAQRCELPVTEVTTQLLQLELSGKIAVVSGGYIRLHK

Flanking regions ( +/- flanking 50bp)

GCACATAGCGGATACCGCATTTTTATCACAGGCTCAGCCGGGATGGCAGGATGGACGAAAAGGAAATTTGGTTACGCCTGGCGTGTATCAGGCGGTTAAGTACACATCATGCCGTTAGTGTGGCGAAAACACTGACGGAGATCTGCTCACAGAAAAAAGCACAGATCCAGCGGCAGTTACACCATTGCGGATTAACACTGGCGCAATGTCAGCAGTTTATGAATGTGAACTCGTCACGGCTGAAAACAGCACTTTTATGGACTGATTTACCGGGTAATTCAATATTGCCTTTGTCATCACCACACTATCCATTTTTATTAAAGCAGATCTATTCTCCCCCGACTGTGCTTTTTGTGGCAGGGCAGTGTACAGAGTTGTCTGCACCGCAGGTCAGTCTGGTGGGCAGTCGTGCCACAACCCATTATGGTGAGAAATGGGCAGAATCATTTACCCGTCATCTGGTGCAGCACGATCTGGTGATAACCAGCGGGTTGGCTGCCGGAATTGACGGATGCTGTCATCGCGCGGCACTGGCGGCGGGCGGGAAAACTATCGCGGTATTAGGTAGCGGGCTTTCTCATATTTATCCCGCAAGACACCGGCAACTGGCGGAAACAATCACGGAAAAGGGGGTGCTTGTCTCCGAATACTTTCCGGATATCCCTCCGCTGGCAAAAAATTTTCCCCGCCGTAACCGGATTATCAGTGGGTTAAGCCGATTGCTTATTGTGATTGAAGCCGGTAGGCGGAGCGGATCACTCATCACCGCGCAATGTGCACTGGAACAGGGGCGGGATGTTTTTACCCTGCCGGCGGTACTGGGGCATCCGGCTTATGAAGGTAACCACTGGCTATTGCAGCAGGGCGCGTATATTGCGACTGCACCATCTGATATTACGGATCATCTCGCGTTGGATATGCAGTGGCTTCCATTGCCGGAGATACAGAAGGTTAAAGAAATTAAAGAAGAAGAGGCGATTGCAGAGCAGGAAGAGTTGCCATTTGCACATGTGCTGATTAATGTGGATGATGAACCCACTCCGCCGGATGTTATTGCACAACGGTGTGAACTGCCGGTCACTGAGGTGACCACACAACTGCTGCAGCTTGAGTTATCGGGTAAAATAGCCGTGGTCAGCGGGGGGTATATCCGCCTGCATAAATAAAGCGGCATTGGCGTAAGGTGAAATTAAAATGTCAACATCAACAGCAGAGT