Homologs in group_2077

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15540 FBDBKF_15540 85.3 Morganella morganii S1 asd aspartate-semialdehyde dehydrogenase
EHELCC_15900 EHELCC_15900 85.3 Morganella morganii S2 asd aspartate-semialdehyde dehydrogenase
NLDBIP_16470 NLDBIP_16470 85.3 Morganella morganii S4 asd aspartate-semialdehyde dehydrogenase
LHKJJB_16335 LHKJJB_16335 85.3 Morganella morganii S3 asd aspartate-semialdehyde dehydrogenase
HKOGLL_16105 HKOGLL_16105 85.3 Morganella morganii S5 asd aspartate-semialdehyde dehydrogenase
F4V73_RS17610 F4V73_RS17610 84.2 Morganella psychrotolerans asd aspartate-semialdehyde dehydrogenase

Distribution of the homologs in the orthogroup group_2077

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2077

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8FCR6 0.0 627 79 1 368 3 asd Aspartate-semialdehyde dehydrogenase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9R1 0.0 625 79 1 368 3 asd Aspartate-semialdehyde dehydrogenase Shigella flexneri
P0A9Q9 0.0 625 79 1 368 1 asd Aspartate-semialdehyde dehydrogenase Escherichia coli (strain K12)
P0A9R0 0.0 625 79 1 368 3 asd Aspartate-semialdehyde dehydrogenase Escherichia coli O157:H7
P0A1F8 0.0 615 78 2 369 1 asd Aspartate-semialdehyde dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1F9 0.0 615 78 2 369 3 asd Aspartate-semialdehyde dehydrogenase Salmonella typhi
P44801 0.0 560 71 2 369 1 asd Aspartate-semialdehyde dehydrogenase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q51344 0.0 550 70 0 367 1 asd Aspartate-semialdehyde dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9KQG2 0.0 528 66 0 364 1 asd1 Aspartate-semialdehyde dehydrogenase 1 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P57008 0.0 522 68 1 365 3 asd Aspartate-semialdehyde dehydrogenase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P30903 0.0 518 67 1 365 3 asd Aspartate-semialdehyde dehydrogenase Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q89AB8 0.0 513 65 2 367 3 asd Aspartate-semialdehyde dehydrogenase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P57523 2.16e-180 508 64 2 368 3 asd Aspartate-semialdehyde dehydrogenase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P41399 2.59e-174 492 64 1 369 3 asd Aspartate-semialdehyde dehydrogenase Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P96198 6.39e-173 488 64 3 370 3 asd Aspartate-semialdehyde dehydrogenase Azotobacter vinelandii
Q8K9B5 1.93e-172 488 61 2 368 3 asd Aspartate-semialdehyde dehydrogenase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q44151 1.82e-150 428 70 1 286 3 asd Aspartate-semialdehyde dehydrogenase (Fragment) Actinobacillus pleuropneumoniae
O25801 1.75e-27 114 26 8 357 3 asd Aspartate-semialdehyde dehydrogenase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZK28 3.34e-27 113 26 10 357 3 asd Aspartate-semialdehyde dehydrogenase Helicobacter pylori (strain J99 / ATCC 700824)
O67716 2.07e-26 110 27 9 357 3 asd Aspartate-semialdehyde dehydrogenase Aquifex aeolicus (strain VF5)
Q59291 9.22e-25 106 27 10 366 3 asd Aspartate-semialdehyde dehydrogenase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P49420 1.58e-21 97 26 12 354 3 asd Aspartate-semialdehyde dehydrogenase Prochlorococcus marinus (strain SARG / CCMP1375 / SS120)
O31219 1.55e-20 94 26 9 365 3 asd Aspartate-semialdehyde dehydrogenase Legionella pneumophila
Q56734 3.66e-19 90 26 9 358 3 asd Aspartate-semialdehyde dehydrogenase Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
P23247 1.34e-18 89 25 9 366 1 asd2 Aspartate-semialdehyde dehydrogenase 2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q56732 2.68e-18 88 26 9 358 3 asd Aspartate-semialdehyde dehydrogenase Shewanella sp. (strain DB6705)
Q60080 2.84e-18 87 26 8 297 3 asd Aspartate-semialdehyde dehydrogenase (Fragment) Vibrio mimicus
Q04797 3.28e-18 88 26 13 357 1 asd Aspartate-semialdehyde dehydrogenase Bacillus subtilis (strain 168)
Q55512 2.85e-17 85 26 12 361 3 asd Aspartate-semialdehyde dehydrogenase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P10539 3.39e-17 85 27 14 359 3 asd Aspartate-semialdehyde dehydrogenase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P0C1D8 1.94e-16 82 27 14 344 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q53612 2.49e-16 82 28 15 358 3 asd Aspartate-semialdehyde dehydrogenase Streptomyces akiyoshiensis
P9WNX5 2.79e-16 82 28 12 366 1 asd Aspartate-semialdehyde dehydrogenase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNX4 2.79e-16 82 28 12 366 3 asd Aspartate-semialdehyde dehydrogenase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A543 2.79e-16 82 28 12 366 3 asd Aspartate-semialdehyde dehydrogenase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P41404 2.87e-16 82 25 13 375 3 asd Aspartate-semialdehyde dehydrogenase Mycolicibacterium smegmatis
P0C1D9 2.98e-16 82 27 14 344 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium melassecola
P41400 3.78e-16 82 27 14 345 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium flavescens
Q92IJ0 3.75e-14 76 24 10 360 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q4UM57 5.61e-13 72 23 10 360 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q9ZDL2 2.95e-12 70 23 10 355 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia prowazekii (strain Madrid E)
Q68X56 1.09e-11 68 24 13 361 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
O26890 1.77e-05 49 22 15 390 3 asd Aspartate-semialdehyde dehydrogenase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15520
Feature type CDS
Gene asd
Product aspartate-semialdehyde dehydrogenase
Location 3451943 - 3453049 (strand: -1)
Length 1107 (nucleotides) / 368 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2077
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01118 Semialdehyde dehydrogenase, NAD binding domain
PF02774 Semialdehyde dehydrogenase, dimerisation domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0136 Amino acid transport and metabolism (E) E Aspartate-semialdehyde dehydrogenase

Kegg Ortholog Annotation(s)

Protein Sequence

MKNVGFVGWRGMVGSVLMQRMVEERDFDGINPVFFTTSQLGEAAPAYGNHRSTLQDAYDIDTLASLDIIISCQGGDYTHDIYPKLRQAGWQGYWIDAASALRMNDDAVIILDPVNGQHIQDSLNKGIKTFVGGNCTVSLMLMSLGGLFANDLVEWASVSTYQAASGAGARHMRELLSQMGALHNQVVKELENPASAILDIERKVTNFTRSGTMPTEQFGVPLAGSLIPWIDKQLENGQSREEWKGQAETNKILNTGSNIIPVDGLCVRIGALRCHSQAFTLKLKKDLPVNEIEQLLAQHNDWVKVVPNDRELTMRELTPAAVTGTLSTPVGRIRKLNMGPEFISAFTVGDQLLWGAAEPLRRMLKILA

Flanking regions ( +/- flanking 50bp)

TTAGTGTGAAGTCTCTCACTATTCCTACAGACAAAGACAGGGTAATTACAATGAAAAATGTTGGTTTTGTGGGCTGGCGTGGTATGGTCGGCTCCGTTTTAATGCAAAGAATGGTTGAAGAACGTGATTTTGATGGGATAAACCCTGTTTTCTTCACCACTTCTCAATTAGGTGAAGCAGCACCTGCTTATGGCAATCATCGTAGTACACTGCAAGATGCTTATGATATTGATACGCTCGCCTCACTCGATATCATTATCAGTTGCCAAGGGGGTGATTACACCCATGATATTTATCCCAAACTACGTCAAGCGGGTTGGCAAGGTTATTGGATTGATGCGGCATCTGCACTACGCATGAATGATGATGCGGTGATTATTCTTGATCCCGTTAATGGTCAACATATCCAAGATAGCCTCAATAAAGGTATTAAAACCTTTGTGGGGGGGAATTGCACCGTAAGCTTAATGTTGATGTCTTTGGGCGGACTTTTTGCTAACGATTTAGTTGAGTGGGCTAGTGTCTCCACTTACCAAGCCGCATCCGGCGCCGGTGCGCGTCATATGCGTGAATTATTGTCACAAATGGGTGCATTACATAACCAAGTGGTTAAAGAGCTAGAAAATCCAGCTTCGGCAATTTTAGATATTGAGCGCAAAGTCACTAACTTTACTCGCAGTGGTACTATGCCGACAGAGCAATTTGGTGTTCCACTGGCTGGTAGCTTAATTCCTTGGATTGATAAACAATTGGAAAATGGCCAGAGCCGTGAAGAGTGGAAAGGCCAAGCTGAAACCAACAAGATCTTAAACACCGGTTCAAATATCATTCCTGTGGATGGTCTTTGTGTTCGTATAGGTGCATTACGTTGTCATAGCCAAGCATTCACCTTAAAACTGAAAAAAGATTTACCGGTTAACGAAATTGAGCAATTGCTTGCCCAACATAATGATTGGGTAAAAGTAGTGCCAAACGATCGTGAATTAACAATGCGCGAATTAACCCCAGCAGCCGTAACGGGCACATTAAGTACCCCTGTAGGACGTATTCGTAAACTGAATATGGGACCTGAATTTATTTCTGCCTTTACAGTGGGTGATCAGTTGTTATGGGGTGCCGCAGAGCCACTTCGTCGTATGCTGAAGATCTTAGCTTAAAACACAACGAATACTATAGATATAAAAAACCCGCTAACCTATTGAATTAG