Homologs in group_290

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07025 FBDBKF_07025 30.0 Morganella morganii S1 ybjT DUF2867 domain-containing protein
EHELCC_03945 EHELCC_03945 30.0 Morganella morganii S2 ybjT DUF2867 domain-containing protein
NLDBIP_03945 NLDBIP_03945 30.0 Morganella morganii S4 ybjT DUF2867 domain-containing protein
LHKJJB_09775 LHKJJB_09775 30.0 Morganella morganii S3 ybjT DUF2867 domain-containing protein
HKOGLL_09200 HKOGLL_09200 30.0 Morganella morganii S5 ybjT DUF2867 domain-containing protein
F4V73_RS01215 F4V73_RS01215 29.6 Morganella psychrotolerans - DUF2867 domain-containing protein
PMI_RS03360 PMI_RS03360 30.0 Proteus mirabilis HI4320 - DUF2867 domain-containing protein

Distribution of the homologs in the orthogroup group_290

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_290

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q04304 2.41e-21 91 32 9 222 1 YMR090W UPF0659 protein YMR090W Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O07609 4.78e-16 76 31 6 218 2 yhfK Uncharacterized sugar epimerase YhfK Bacillus subtilis (strain 168)
Q8H124 1.05e-12 68 26 7 222 1 At2g34460 Uncharacterized protein At2g34460, chloroplastic Arabidopsis thaliana
P74429 2.93e-09 59 27 7 166 1 ycf39 Photosystem II assembly factor Ycf39 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
B6SZW0 4.07e-07 53 30 3 126 1 DVR Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic Zea mays
P48279 4.6e-06 49 32 3 117 3 ycf39 Photosystem II assembly factor Ycf39 Cyanophora paradoxa
O78472 1.56e-05 48 28 3 118 3 ycf39 Photosystem II assembly factor Ycf39 Guillardia theta
Q10LH0 4.16e-05 47 28 3 126 3 DVR Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic Oryza sativa subsp. japonica
D5L1S4 4.16e-05 47 28 3 126 1 DVR Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic Oryza sativa subsp. indica
O65502 0.000183 45 24 7 180 1 HCF244 Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic Arabidopsis thaliana
P51238 0.000215 44 26 2 115 3 ycf39 Photosystem II assembly factor Ycf39 Porphyra purpurea
Q1XDP9 0.000345 44 27 2 115 3 ycf39 Photosystem II assembly factor Ycf39 Neopyropia yezoensis
Q60A54 0.000367 44 27 4 137 1 sdmB Sterol demethylase protein B Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
P75822 0.000413 44 26 5 121 3 ybjT Putative NAD(P)-binding protein YbjT Escherichia coli (strain K12)
Q9Y7K0 0.001 42 26 5 146 3 SPBC216.03 UPF0659 protein C216.03 Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12560
Feature type CDS
Gene -
Product NAD(P)H-binding protein
Location 2784650 - 2785288 (strand: 1)
Length 639 (nucleotides) / 212 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_290
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF13460 NAD(P)H-binding

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2910 General function prediction only (R) R Putative NADH-flavin reductase

Protein Sequence

MNILVIGAKGRVGQRLIEILLAKGHHVIGTTRKLSDTSVHHPSQYHEIELDITKPLSSITDLLPDNLEAIYFTTGSRGKDLLQVDLHGAVKTMQAAEKKGIKRYIMLSAINSLSPDKWTELIDYFTAKYFADLYLRDRTQLDFTLVQAGYLTEKQGTYKITTKLEDNATKGEITIDNVAATLAEILDKPNTFKKCIPILDGDEAIKTALSRI

Flanking regions ( +/- flanking 50bp)

AGTGTAAAGAGGAGCTTCAAACACGAAATTGAGATTTTAATGGAGGAAATATGAATATTCTCGTCATTGGCGCTAAAGGTCGAGTAGGTCAGCGTTTAATCGAAATATTACTTGCTAAAGGTCATCATGTCATAGGTACAACCCGAAAATTATCCGACACATCAGTACATCATCCCTCACAGTACCATGAAATTGAATTGGACATAACAAAGCCGTTATCATCCATCACCGATTTATTGCCAGACAATTTAGAGGCTATCTATTTTACGACAGGCTCCCGAGGAAAGGATTTATTACAAGTTGATTTACATGGTGCTGTTAAAACGATGCAAGCAGCAGAAAAAAAAGGAATAAAAAGATATATTATGCTCAGTGCGATTAATTCATTATCACCTGATAAATGGACTGAATTAATTGATTATTTTACTGCTAAATATTTTGCCGACCTCTACTTACGGGATCGTACCCAGTTAGATTTCACCCTTGTTCAAGCAGGCTATTTAACTGAAAAACAAGGCACATATAAAATTACGACCAAATTGGAAGATAATGCTACAAAAGGTGAAATCACTATTGATAATGTCGCGGCAACATTAGCAGAGATATTAGATAAGCCGAATACATTTAAAAAATGCATTCCTATATTAGATGGTGACGAGGCGATTAAAACAGCCCTCAGTCGAATTTAGAAACGATTAGTTTACTGATTTTGATAAAAAACAATCTGACCCTGATAGAC