Orthogroup:group_172


Homologs in group_172

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07025 FBDBKF_07025 Morganella morganii S1 ybjT DUF2867 domain-containing protein
EHELCC_03945 EHELCC_03945 Morganella morganii S2 ybjT DUF2867 domain-containing protein
NLDBIP_03945 NLDBIP_03945 Morganella morganii S4 ybjT DUF2867 domain-containing protein
LHKJJB_09775 LHKJJB_09775 Morganella morganii S3 ybjT DUF2867 domain-containing protein
HKOGLL_09200 HKOGLL_09200 Morganella morganii S5 ybjT DUF2867 domain-containing protein
F4V73_RS01215 F4V73_RS01215 Morganella psychrotolerans - DUF2867 domain-containing protein
PMI_RS03360 PMI_RS03360 Proteus mirabilis HI4320 - DUF2867 domain-containing protein
PMI_RS05600 PMI_RS05600 Proteus mirabilis HI4320 - SDR family oxidoreductase
PMI_RS12560 PMI_RS12560 Proteus mirabilis HI4320 - NAD(P)H-binding protein

Distribution of group_172 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_172 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_172

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_172.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybjT 5
2 - 4

Product

# Product Occurence
1 DUF2867 domain-containing protein 7
2 SDR family oxidoreductase 1
3 NAD(P)H-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0702 8 R General function prediction only (R) Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains
COG2910 1 R General function prediction only (R) Putative NADH-flavin reductase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF11066 7 Protein of unknown function (DUF2867)
PF13460 9 NAD(P)H-binding

Annotations of the 55 SwissProt hits

Annotation Number of occurrences
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase 2
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 1
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 6 1
Bifunctional pinoresinol-lariciresinol reductase 1
Bifunctional pinoresinol-lariciresinol reductase 1 1
Bifunctional pinoresinol-lariciresinol reductase 2 1
Ceramide reductase 1
Cinnamoyl-CoA reductase 1 1
Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic 5
Isoeugenol synthase 1 1
Isoflavone reductase homolog A622 3
Isoflavone reductase homolog A622-like 1
Isoflavone reductase homolog P3 1
N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase 1
NAD(P)H azoreductase 1
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial 1
NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial 1
Phenylcoumaran benzylic ether reductase POP1 1
Phenylcoumaran benzylic ether reductase PT1 1
Phenylcoumaran benzylic ether reductase Pyrc5 1
Photosystem II assembly factor Ycf39 7
Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244, chloroplastic 1
Protein TIC 62, chloroplastic 3
Putative NAD(P)-binding protein YbjT 1
Sanguinarine reductase 1
Sterol demethylase protein B 1
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating 1
UDP-glucose 4-epimerase 1
UDP-glucuronic acid decarboxylase 1 6
UPF0659 protein C216.03 1
UPF0659 protein YMR090W 1
Uncharacterized protein At2g34460, chloroplastic 1
Uncharacterized protein At2g37660, chloroplastic 1
Uncharacterized protein At5g02240 1
Uncharacterized sugar epimerase YhfK 1

Protein length

Min length 212
Max length 487
Mean length (sd) 430.9 (104.5)
Median length 482.0

Protein length distribution