Homologs in group_290

Help

7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07025 FBDBKF_07025 88.4 Morganella morganii S1 ybjT DUF2867 domain-containing protein
EHELCC_03945 EHELCC_03945 88.4 Morganella morganii S2 ybjT DUF2867 domain-containing protein
NLDBIP_03945 NLDBIP_03945 88.4 Morganella morganii S4 ybjT DUF2867 domain-containing protein
LHKJJB_09775 LHKJJB_09775 88.4 Morganella morganii S3 ybjT DUF2867 domain-containing protein
HKOGLL_09200 HKOGLL_09200 88.4 Morganella morganii S5 ybjT DUF2867 domain-containing protein
PMI_RS03360 PMI_RS03360 66.5 Proteus mirabilis HI4320 - DUF2867 domain-containing protein
PMI_RS12560 PMI_RS12560 29.6 Proteus mirabilis HI4320 - NAD(P)H-binding protein

Distribution of the homologs in the orthogroup group_290

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_290

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75822 0.0 560 57 1 471 3 ybjT Putative NAD(P)-binding protein YbjT Escherichia coli (strain K12)
Q56623 1.4e-06 53 25 9 266 3 galE UDP-glucose 4-epimerase Vibrio cholerae
Q15738 0.000208 47 23 5 175 1 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Homo sapiens
Q5R885 0.000501 46 30 3 80 2 UXS1 UDP-glucuronic acid decarboxylase 1 Pongo abelii
Q8NBZ7 0.000505 46 30 3 80 1 UXS1 UDP-glucuronic acid decarboxylase 1 Homo sapiens
Q91XL3 0.000547 45 30 3 80 1 Uxs1 UDP-glucuronic acid decarboxylase 1 Mus musculus
Q5PQX0 0.000561 45 30 3 80 1 Uxs1 UDP-glucuronic acid decarboxylase 1 Rattus norvegicus
Q6DF08 0.000619 45 30 3 80 2 uxs1 UDP-glucuronic acid decarboxylase 1 Xenopus tropicalis
Q6GMI9 0.000649 45 30 3 80 1 uxs1 UDP-glucuronic acid decarboxylase 1 Danio rerio
Q6K9A2 0.000871 45 22 2 124 1 CCR1 Cinnamoyl-CoA reductase 1 Oryza sativa subsp. japonica

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01215
Feature type CDS
Gene -
Product DUF2867 domain-containing protein
Location 255753 - 257201 (strand: -1)
Length 1449 (nucleotides) / 482 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_290
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF11066 Protein of unknown function (DUF2867)
PF13460 NAD(P)H-binding

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0702 General function prediction only (R) R Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains

Protein Sequence

MSQQRILVLGASGYVGQHLVPQLIAAGHQITAAARRVEWMQAQGWKNTRCCYADLYDKSTLEPLFQDIDVVYYLVHSMTDEENLLERERLAAQNVQDILNNSSVREVIFLSAMQHGHTDSPHLAARKLTGEILADSRVPVTEIRAAIIVGPGSAAFEIMRDMVYNLPVLTPPRWARSKSSPIALENLLAYLTGLLAHPATDNRRFDATGPEFLSYLEMFRHFIAVSGKRRLMIPLPIPLRLISVHFLRLITTVPEGIAKELIMGLKYDLPGDGRPLEALIPQTLLSFDDAVRKTLKDEADAVDNEDWGYDPDARARWRPGFGFYPKQAGFTLNTSASAEALWHVIQQIGGKDGYFYANVLWSVRARLDDLCANKVTYGRPDRDTLELGDKIDGWKVITLKPGKQLSLLFGMKAPGLGRLTFTIRDHGHQRELDVRAWWHPAGFSGLLYWFAMMPAHLFIFKGMAKSVIKRAQEYAQSHSAEK

Flanking regions ( +/- flanking 50bp)

GATTACCTGAAATTTACCTGAAACTGTTTATCCGAAAAAAGAGAGCCTGCATGTCACAACAACGTATTTTAGTGCTCGGTGCCAGTGGTTATGTCGGGCAACATCTTGTCCCGCAACTGATTGCCGCCGGACATCAGATAACCGCTGCGGCACGCCGTGTTGAGTGGATGCAGGCGCAGGGCTGGAAAAACACCCGCTGCTGTTATGCCGACCTGTATGATAAATCCACTCTGGAGCCGCTTTTTCAGGATATCGATGTGGTTTACTACCTCGTCCACAGTATGACGGACGAGGAAAATCTGCTGGAGCGCGAGCGGCTGGCGGCACAGAATGTGCAGGACATACTGAACAATTCATCTGTGCGCGAAGTGATTTTTCTGAGCGCCATGCAGCACGGACATACAGACTCACCGCATCTTGCCGCCCGCAAACTGACCGGGGAAATTCTCGCGGACAGCCGGGTGCCGGTCACGGAGATCCGCGCCGCTATTATTGTCGGACCGGGCTCCGCCGCATTCGAAATCATGCGCGATATGGTATATAACCTGCCGGTTCTGACCCCGCCGCGCTGGGCGCGATCCAAATCCTCCCCGATTGCACTGGAAAACCTGCTGGCGTATCTGACCGGTTTGCTGGCGCATCCTGCCACTGATAACCGCCGCTTTGATGCCACTGGTCCGGAATTCCTCAGTTATCTGGAGATGTTCCGCCATTTTATTGCCGTCAGCGGCAAACGCCGGCTGATGATCCCGCTGCCTATTCCGCTGCGTCTTATTTCTGTCCATTTTCTGCGCCTGATAACCACGGTTCCGGAAGGAATAGCCAAAGAACTGATCATGGGGCTGAAATATGATTTACCCGGTGACGGACGCCCGCTGGAAGCACTTATCCCGCAGACACTGCTCAGTTTTGATGATGCGGTGCGCAAAACCCTGAAAGATGAAGCCGATGCCGTGGATAACGAGGACTGGGGATATGACCCGGATGCCCGCGCCCGCTGGCGTCCGGGGTTTGGTTTTTATCCCAAACAGGCGGGGTTTACCCTGAATACATCTGCATCCGCAGAGGCGCTGTGGCATGTTATTCAGCAGATCGGCGGCAAAGACGGCTATTTTTACGCCAATGTTTTATGGTCAGTCCGCGCCAGACTCGATGATTTATGCGCCAATAAAGTCACTTACGGACGCCCGGATCGCGATACCCTGGAATTAGGGGATAAAATCGACGGCTGGAAAGTGATCACACTGAAACCCGGCAAGCAGCTCTCTTTACTGTTCGGCATGAAAGCCCCGGGGCTGGGACGCCTGACCTTTACTATCCGCGACCACGGACATCAGCGCGAACTGGATGTGCGCGCCTGGTGGCATCCTGCCGGGTTCAGCGGGCTGCTGTATTGGTTTGCCATGATGCCCGCGCATTTATTCATCTTTAAAGGAATGGCGAAATCTGTCATTAAACGCGCGCAGGAGTATGCTCAGTCACACTCTGCGGAGAAATAAACCATTGCAATAAGTACATTCACTGTCTTTTTAGTAATTTTTTATGCATA