Homologs in group_290

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07025 FBDBKF_07025 66.9 Morganella morganii S1 ybjT DUF2867 domain-containing protein
EHELCC_03945 EHELCC_03945 66.9 Morganella morganii S2 ybjT DUF2867 domain-containing protein
NLDBIP_03945 NLDBIP_03945 66.9 Morganella morganii S4 ybjT DUF2867 domain-containing protein
LHKJJB_09775 LHKJJB_09775 66.9 Morganella morganii S3 ybjT DUF2867 domain-containing protein
HKOGLL_09200 HKOGLL_09200 66.9 Morganella morganii S5 ybjT DUF2867 domain-containing protein
F4V73_RS01215 F4V73_RS01215 66.5 Morganella psychrotolerans - DUF2867 domain-containing protein
PMI_RS12560 PMI_RS12560 30.0 Proteus mirabilis HI4320 - NAD(P)H-binding protein

Distribution of the homologs in the orthogroup group_290

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_290

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75822 0.0 580 57 0 469 3 ybjT Putative NAD(P)-binding protein YbjT Escherichia coli (strain K12)
P74429 1.03e-06 54 25 7 188 1 ycf39 Photosystem II assembly factor Ycf39 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9LD14 2.33e-06 53 23 5 167 1 PLR_Tp1 Bifunctional pinoresinol-lariciresinol reductase 1 Thuja plicata
Q9LD13 1.11e-05 50 22 4 162 1 PLR_Tp2 Bifunctional pinoresinol-lariciresinol reductase 2 Thuja plicata
Q9LD12 4.1e-05 49 22 4 162 2 None Bifunctional pinoresinol-lariciresinol reductase Thuja plicata
Q60A54 0.000253 47 25 1 111 1 sdmB Sterol demethylase protein B Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
Q56623 0.000265 46 20 8 271 3 galE UDP-glucose 4-epimerase Vibrio cholerae
Q1XDP9 0.000814 45 20 7 239 3 ycf39 Photosystem II assembly factor Ycf39 Neopyropia yezoensis

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03360
Feature type CDS
Gene -
Product DUF2867 domain-containing protein
Location 740546 - 742009 (strand: -1)
Length 1464 (nucleotides) / 487 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_290
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF11066 Protein of unknown function (DUF2867)
PF13460 NAD(P)H-binding

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0702 General function prediction only (R) R Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains

Protein Sequence

MNQQRVLVLGASGHIGQNLIPALIAQGHQVTAGARRVDWMMSQGWQNTRCVFVDLHDPKTLRDVIRNTDIVYYLVHSMGDAHNLIEQERQAALNVVDALEESDVKQIIFLSALQHKDQPYSPHLVARKLTGEVLRTSSIPVTEIRTSMIVGPGSAAFEIMRDMVYNLPILTPPRWVRSKSSPIALKNLIYYLTEIIHHPTHQHRIFDAGGPEYISYQTLFERFINISGKKRLLIPLPIPASIISAGFISLITSVPTSIAKELIQGLKYDLPAKDASLRKLIPQKLISFDDAVRETLADEEAALDDQDWGYSPEVRNRWKPGYGYYPKNAGCTVSTPASAAALWHVVQQIGGEQGYFYGNALWKTRALLDDLVGNKVTYGRPQRETLALGDMIDGWRVIKLEPEKQLTLLFGMKAPGLGRLSFTIHDSGNLRSLDVRAWWHPAGFSGLLYWFAMMPAHLFIFKGMAQTVSTCAYRLDKNSPKKPEQSS

Flanking regions ( +/- flanking 50bp)

AAATTTTGTAACAATAGTATTATTACGTCTTTTCTTACAGTGGGTTAACGATGAATCAACAGCGTGTATTGGTATTAGGTGCCAGTGGACATATTGGACAAAATCTTATTCCTGCCTTAATAGCACAAGGCCATCAAGTCACCGCCGGTGCTCGTAGAGTCGATTGGATGATGTCGCAAGGGTGGCAAAATACACGCTGTGTATTTGTTGATTTACACGATCCCAAAACATTACGAGATGTCATCCGTAATACGGATATTGTGTATTACCTTGTGCACAGTATGGGAGATGCCCATAACCTTATCGAACAAGAGCGCCAAGCGGCATTGAACGTCGTCGATGCTTTAGAAGAGAGTGACGTTAAACAAATTATTTTTTTAAGTGCGCTCCAACATAAAGATCAACCCTACTCTCCCCATCTTGTTGCCCGCAAGCTCACGGGAGAAGTGCTTAGAACCAGCTCTATTCCTGTGACGGAAATCCGCACCTCTATGATTGTCGGCCCCGGCTCGGCCGCTTTTGAGATCATGCGAGATATGGTATATAACTTACCGATATTAACCCCGCCACGTTGGGTGCGTTCAAAATCATCCCCTATTGCGTTAAAAAATTTAATTTACTATTTAACAGAAATTATTCATCACCCAACCCATCAACACCGCATTTTTGATGCCGGTGGCCCTGAATATATTAGCTATCAAACACTTTTTGAGCGCTTTATTAACATCTCCGGCAAAAAACGATTACTGATCCCTTTACCTATCCCCGCCAGTATTATTTCTGCTGGGTTTATTAGTCTAATAACTTCAGTTCCCACTTCAATCGCCAAGGAGCTTATCCAAGGGCTTAAATACGATCTTCCCGCTAAAGATGCCTCTTTACGCAAGCTGATCCCACAAAAGTTAATTTCTTTTGATGACGCAGTCAGAGAAACACTCGCAGATGAAGAAGCGGCTTTAGATGATCAAGATTGGGGTTACTCTCCTGAAGTACGTAACCGTTGGAAACCCGGCTATGGCTATTATCCCAAAAATGCCGGATGTACAGTGTCAACACCAGCGAGTGCGGCGGCACTTTGGCATGTCGTTCAGCAAATTGGTGGTGAACAAGGTTATTTTTATGGTAATGCATTATGGAAAACACGTGCTTTATTAGATGATCTTGTTGGCAACAAAGTCACTTATGGGCGCCCTCAGCGTGAAACGCTAGCGCTAGGTGATATGATTGATGGTTGGCGGGTAATAAAGTTAGAGCCTGAAAAACAACTGACTTTACTCTTCGGTATGAAAGCCCCCGGTTTAGGGCGCCTCTCTTTTACTATTCACGATAGTGGTAACCTACGCTCATTAGATGTCCGTGCTTGGTGGCATCCTGCTGGTTTTAGTGGTTTACTCTATTGGTTTGCCATGATGCCAGCCCATTTATTTATTTTTAAAGGTATGGCTCAAACCGTCTCAACTTGCGCCTATAGATTGGATAAAAATTCACCTAAAAAGCCCGAGCAATCGTCCTAATATCCATTTTTAAGTAAAAAAAGCAATTTTTTATGCACTATTAGTTGCAT