Homologs in group_1153

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06605 FBDBKF_06605 82.8 Morganella morganii S1 serB phosphoserine phosphatase
EHELCC_09650 EHELCC_09650 82.8 Morganella morganii S2 serB phosphoserine phosphatase
NLDBIP_10030 NLDBIP_10030 82.8 Morganella morganii S4 serB phosphoserine phosphatase
LHKJJB_07725 LHKJJB_07725 82.8 Morganella morganii S3 serB phosphoserine phosphatase
HKOGLL_07275 HKOGLL_07275 82.8 Morganella morganii S5 serB phosphoserine phosphatase
F4V73_RS15340 F4V73_RS15340 81.8 Morganella psychrotolerans serB phosphoserine phosphatase

Distribution of the homologs in the orthogroup group_1153

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1153

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AGB2 1.51e-163 461 67 0 320 3 serB Phosphoserine phosphatase Shigella flexneri
P0AGB0 1.51e-163 461 67 0 320 1 serB Phosphoserine phosphatase Escherichia coli (strain K12)
P0AGB1 1.51e-163 461 67 0 320 3 serB Phosphoserine phosphatase Escherichia coli O157:H7
P44997 3.48e-95 287 48 3 305 3 serB Phosphoserine phosphatase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9KPM2 2.92e-94 285 49 0 287 1 VC_2345 Phosphoserine phosphatase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q5QXU4 1.14e-61 198 50 0 208 1 serB_2 Phosphoserine phosphatase Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
O28142 8.18e-60 198 42 2 240 3 AF_2138 Phosphoserine phosphatase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q9S281 6.42e-57 192 47 1 229 1 SCO1808 Phosphoserine phosphatase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
O53289 8.73e-51 176 45 0 208 1 serB2 Phosphoserine phosphatase SerB2 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q9CHW3 3.91e-50 169 42 0 206 1 serB Phosphoserine phosphatase Lactococcus lactis subsp. lactis (strain IL1403)
A0QJI1 1.45e-48 170 36 4 314 1 serB Phosphoserine phosphatase Mycobacterium avium (strain 104)
Q5M3B3 3.34e-47 161 46 0 205 1 serB Phosphoserine phosphatase Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
O74382 4.38e-46 161 46 2 206 2 SPBC3H7.07c Probable phosphoserine phosphatase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q58989 4.83e-44 153 38 0 205 1 MJ1594 Phosphoserine phosphatase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P42941 2.5e-43 154 37 3 247 1 SER2 Phosphoserine phosphatase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q12A06 7.59e-43 150 44 3 203 1 serB Phosphoserine phosphatase Polaromonas sp. (strain JS666 / ATCC BAA-500)
Q21YU0 2.02e-41 147 41 3 220 1 serB Phosphoserine phosphatase Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)
Q7M7U5 3.26e-37 135 38 0 204 1 SERB Phosphoserine phosphatase Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / CCUG 13145 / JCM 31913 / LMG 7466 / NCTC 11488 / FDC 602W)
A7H590 3.02e-35 130 39 0 197 1 serB Phosphoserine phosphatase Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)
B0R7U7 2.27e-20 90 35 2 201 3 serB Phosphoserine phosphatase Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Q2KHU0 8.73e-18 84 30 5 182 2 PSPH Phosphoserine phosphatase Bos taurus
Q5RB83 2.09e-17 83 31 5 182 2 PSPH Phosphoserine phosphatase Pongo abelii
P78330 2.09e-17 83 31 5 182 1 PSPH Phosphoserine phosphatase Homo sapiens
Q99LS3 6.87e-16 79 29 5 185 1 Psph Phosphoserine phosphatase Mus musculus
Q5M819 8.22e-16 78 30 5 182 2 Psph Phosphoserine phosphatase Rattus norvegicus
O82796 9.7e-13 70 32 10 210 1 PSP Phosphoserine phosphatase, chloroplastic Arabidopsis thaliana
Q9VSY6 9.81e-11 64 29 8 226 2 aay Phosphoserine phosphatase Drosophila melanogaster
P94592 1.85e-07 55 35 2 92 1 ywpJ Phosphatase YwpJ Bacillus subtilis (strain 168)
P75809 0.00052 44 35 1 81 1 ybjI 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12390
Feature type CDS
Gene serB
Product phosphoserine phosphatase
Location 2747333 - 2748310 (strand: -1)
Length 978 (nucleotides) / 325 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1153
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00702 haloacid dehalogenase-like hydrolase
PF18429 Domain of unknown function (DUF5609)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0560 Amino acid transport and metabolism (E) E Phosphoserine phosphatase

Kegg Ortholog Annotation(s)

Protein Sequence

MSNSLTYCYLPDEIRKWPGLPLSLSGEEVMPLDYRAGDSGWLLYGRELDKKRISEFQHKLGVAIVVVSSWRIDDYQVVRIAGSLTRRIRRLSDECGLDVVPFGQIPRLRSPGLLVMDMDSTAIQIECIDEIAKLAGVGDKVAEITEQAMQGEMDFSESLKLRVAQLAGADANILQKVMDNLPLMPGLTSLVRKLQAMDWQIAIASGGFTYFADNLKQRLRLVAAVANQLEIKDGKLTGKVKGPIVDAKYKAQVLTRLAKDLDIPLEQTIAIGDGANDLKMLRKAGLGIAYHAKPKVYAQAKVAIRHADLMGVMCILSAGLKHEER

Flanking regions ( +/- flanking 50bp)

GGCTGAATAACAATTATTTTGTTCAGACAGGGGAAAACAGGAGAATAAGTATGTCAAATAGTCTGACCTATTGCTATTTACCGGATGAGATCCGTAAATGGCCAGGTCTACCGCTATCACTCAGTGGTGAAGAAGTGATGCCACTGGATTATCGTGCAGGCGATAGCGGATGGTTACTTTATGGACGAGAACTTGATAAAAAAAGAATAAGTGAGTTCCAGCATAAATTAGGTGTGGCTATTGTGGTGGTTTCTTCATGGCGTATTGATGATTACCAAGTGGTACGTATTGCGGGAAGTTTAACCCGTCGTATTCGTCGGTTATCTGATGAATGTGGTTTAGATGTTGTACCCTTTGGGCAGATCCCACGTTTACGCTCTCCGGGACTTTTAGTGATGGATATGGATTCCACGGCTATTCAAATTGAGTGTATTGATGAAATCGCTAAACTGGCCGGTGTCGGTGATAAAGTGGCCGAGATAACGGAGCAAGCGATGCAAGGTGAAATGGATTTTAGTGAAAGCCTAAAATTGCGTGTTGCACAATTAGCGGGAGCTGATGCGAATATTTTACAAAAAGTAATGGATAATTTACCTCTGATGCCCGGGTTAACAAGTTTAGTGCGTAAGCTTCAGGCAATGGATTGGCAAATTGCGATTGCATCAGGGGGATTTACTTATTTTGCTGATAACCTAAAACAGCGATTACGTTTAGTTGCAGCGGTTGCTAATCAGCTAGAAATTAAAGATGGTAAATTAACGGGCAAAGTCAAAGGCCCTATTGTTGATGCTAAATATAAAGCGCAAGTGCTTACACGCTTAGCTAAAGATTTAGATATACCGCTGGAACAAACCATTGCGATAGGTGATGGCGCAAACGATCTTAAAATGCTTAGAAAGGCGGGTTTAGGTATTGCCTACCATGCCAAACCTAAAGTATATGCACAAGCCAAAGTAGCTATTCGTCATGCTGATTTAATGGGTGTGATGTGTATTTTAAGTGCAGGATTAAAGCACGAAGAACGATAAGTTTTCAGTCAAGAAAATAACGGGGAGAGCAGTGTGGCAAAAGCAGCCAA