Homologs in group_1213

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06605 FBDBKF_06605 97.2 Morganella morganii S1 serB phosphoserine phosphatase
EHELCC_09650 EHELCC_09650 97.2 Morganella morganii S2 serB phosphoserine phosphatase
NLDBIP_10030 NLDBIP_10030 97.2 Morganella morganii S4 serB phosphoserine phosphatase
LHKJJB_07725 LHKJJB_07725 97.2 Morganella morganii S3 serB phosphoserine phosphatase
HKOGLL_07275 HKOGLL_07275 97.2 Morganella morganii S5 serB phosphoserine phosphatase
PMI_RS12390 PMI_RS12390 81.8 Proteus mirabilis HI4320 serB phosphoserine phosphatase

Distribution of the homologs in the orthogroup group_1213

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1213

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AGB2 2.43e-161 456 67 0 320 3 serB Phosphoserine phosphatase Shigella flexneri
P0AGB0 2.43e-161 456 67 0 320 1 serB Phosphoserine phosphatase Escherichia coli (strain K12)
P0AGB1 2.43e-161 456 67 0 320 3 serB Phosphoserine phosphatase Escherichia coli O157:H7
P44997 3.3e-91 277 47 3 305 3 serB Phosphoserine phosphatase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9KPM2 3.54e-90 275 48 2 290 1 VC_2345 Phosphoserine phosphatase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q5QXU4 3.82e-63 202 50 1 216 1 serB_2 Phosphoserine phosphatase Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
O28142 9.92e-55 184 40 2 240 3 AF_2138 Phosphoserine phosphatase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q9S281 1.08e-52 181 48 1 216 1 SCO1808 Phosphoserine phosphatase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
O53289 1.21e-49 173 37 3 309 1 serB2 Phosphoserine phosphatase SerB2 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
A0QJI1 1.42e-47 168 36 3 309 1 serB Phosphoserine phosphatase Mycobacterium avium (strain 104)
Q58989 8.48e-47 160 41 0 205 1 MJ1594 Phosphoserine phosphatase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9CHW3 3.23e-46 159 41 0 206 1 serB Phosphoserine phosphatase Lactococcus lactis subsp. lactis (strain IL1403)
O74382 5.76e-45 158 42 3 226 2 SPBC3H7.07c Probable phosphoserine phosphatase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q5M3B3 4.15e-44 153 45 0 205 1 serB Phosphoserine phosphatase Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
P42941 6.24e-44 155 39 4 244 1 SER2 Phosphoserine phosphatase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q12A06 7.89e-44 153 43 3 209 1 serB Phosphoserine phosphatase Polaromonas sp. (strain JS666 / ATCC BAA-500)
Q21YU0 2.37e-39 141 40 3 203 1 serB Phosphoserine phosphatase Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118)
Q7M7U5 3.04e-38 137 39 0 204 1 SERB Phosphoserine phosphatase Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / CCUG 13145 / JCM 31913 / LMG 7466 / NCTC 11488 / FDC 602W)
A7H590 1.05e-31 120 36 0 197 1 serB Phosphoserine phosphatase Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97)
B0R7U7 1.5e-22 96 38 2 201 3 serB Phosphoserine phosphatase Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Q5RB83 8.57e-17 81 31 5 182 2 PSPH Phosphoserine phosphatase Pongo abelii
P78330 8.57e-17 81 31 5 182 1 PSPH Phosphoserine phosphatase Homo sapiens
Q2KHU0 4.95e-16 79 30 5 182 2 PSPH Phosphoserine phosphatase Bos taurus
Q5M819 3.75e-15 76 31 6 184 2 Psph Phosphoserine phosphatase Rattus norvegicus
Q99LS3 3.86e-15 76 30 5 182 1 Psph Phosphoserine phosphatase Mus musculus
O82796 8.01e-14 74 34 8 196 1 PSP Phosphoserine phosphatase, chloroplastic Arabidopsis thaliana
Q9VSY6 3.95e-12 68 32 8 214 2 aay Phosphoserine phosphatase Drosophila melanogaster
P94592 2.24e-05 48 33 2 92 1 ywpJ Phosphatase YwpJ Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15340
Feature type CDS
Gene serB
Product phosphoserine phosphatase
Location 51537 - 52514 (strand: 1)
Length 978 (nucleotides) / 325 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000005
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1213
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12710 haloacid dehalogenase-like hydrolase
PF18429 Domain of unknown function (DUF5609)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0560 Amino acid transport and metabolism (E) E Phosphoserine phosphatase

Kegg Ortholog Annotation(s)

Protein Sequence

MSTSLTYCYLPNEIHKWPGLPLSLSGDEVMPLDYRAGDSGWLLYGRGLDKARISDFQHRLGAAIVVVSSWRIDDYQVVRIAGSLSGRIKRVADEFQMDVVPLGNIPKLRSPGLLMMDMDSTAIQIECIDEIARLAGVGDEVAGVTERAMLGELDFSESLKARVGLLAGADANILQQVLDNLPLMPGLTSLVRKLQAMDWHVAIASGGFTFYANHLKDSLRLIAVYANQLEVKDGKLTGKVKGPVVDAKYKAQALLKLAAFLNIPVEQTVAIGDGANDLKMLKKAGLGIAFHAKPKVYARAKVAIRHADLMGVMCTLSGGLKHEER

Flanking regions ( +/- flanking 50bp)

TTGTCCGCTACCATCATGAATATTATCAGAGATTATAGGAGTATCTGTTGATGTCGACGAGTCTGACCTACTGTTATTTGCCGAATGAAATCCATAAGTGGCCGGGTCTCCCGCTCTCTCTGAGCGGCGACGAAGTGATGCCGCTGGACTACCGGGCGGGTGACAGCGGCTGGCTGTTATACGGCCGCGGGCTGGATAAAGCGCGGATTAGCGATTTCCAGCATCGTCTGGGCGCGGCTATCGTGGTGGTGTCATCATGGCGGATTGATGATTATCAGGTGGTGCGGATAGCGGGCAGTCTGAGCGGGCGCATTAAGCGTGTGGCGGATGAATTTCAGATGGATGTCGTACCATTAGGCAATATCCCGAAACTGCGCTCACCGGGCTTACTGATGATGGACATGGACTCCACGGCAATTCAGATTGAATGTATTGATGAAATCGCCCGTCTTGCGGGAGTCGGTGATGAAGTCGCCGGTGTTACAGAAAGAGCCATGCTGGGTGAGCTGGATTTCAGCGAAAGCCTGAAAGCGCGTGTCGGCCTGCTTGCCGGCGCGGATGCCAACATCTTACAGCAGGTTCTGGATAATCTGCCGCTGATGCCCGGGCTGACCAGTCTGGTGCGAAAACTCCAGGCAATGGACTGGCATGTGGCTATTGCCTCCGGCGGATTCACCTTTTATGCCAATCACCTGAAAGACTCTCTGCGCCTGATTGCGGTGTATGCCAATCAGCTGGAGGTTAAAGACGGCAAACTGACCGGTAAAGTGAAAGGTCCTGTAGTAGATGCAAAATACAAAGCTCAGGCGCTGCTCAAACTGGCGGCGTTTCTTAATATTCCGGTTGAGCAGACAGTGGCGATTGGCGATGGTGCTAATGATTTGAAAATGCTTAAAAAAGCAGGTCTTGGTATTGCATTTCACGCCAAACCGAAAGTCTATGCGCGGGCAAAAGTGGCTATTCGTCACGCCGATTTAATGGGGGTGATGTGTACCCTGAGCGGCGGGCTGAAACACGAAGAACGTTAATTAATCAGTTATTACGGGGTCACGAGTGGCAAAACCAGCAAAACGCGCCT