Orthogroup:group_1213


Homologs in group_1213

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07060 FBDBKF_07060 Morganella morganii S1 clpS ATP-dependent Clp protease adapter ClpS
EHELCC_03910 EHELCC_03910 Morganella morganii S2 clpS ATP-dependent Clp protease adapter ClpS
NLDBIP_03910 NLDBIP_03910 Morganella morganii S4 clpS ATP-dependent Clp protease adapter ClpS
LHKJJB_09740 LHKJJB_09740 Morganella morganii S3 clpS ATP-dependent Clp protease adapter ClpS
HKOGLL_09235 HKOGLL_09235 Morganella morganii S5 clpS ATP-dependent Clp protease adapter ClpS
F4V73_RS01245 F4V73_RS01245 Morganella psychrotolerans clpS ATP-dependent Clp protease adapter ClpS
PMI_RS03390 PMI_RS03390 Proteus mirabilis HI4320 clpS ATP-dependent Clp protease adapter ClpS

Distribution of group_1213 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1213 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1213

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1213.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 clpS 7

Product

# Product Occurence
1 ATP-dependent Clp protease adapter ClpS 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2127 7 O Posttranslational modification, protein turnover, chaperones (O) ATP-dependent Clp protease adapter protein ClpS

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06891 7 ATP-dependent Clp protease adaptor protein ClpS - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02617 7 ATP-dependent Clp protease adaptor protein ClpS

Annotations of the 266 SwissProt hits

Annotation Number of occurrences
ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 1
ATP-dependent Clp protease adapter protein ClpS 255
ATP-dependent Clp protease adapter protein ClpS 1 5
ATP-dependent Clp protease adapter protein ClpS 2 5

Protein length

Min length 104
Max length 106
Mean length (sd) 105.7 (0.8)
Median length 106.0

Protein length distribution