Homologs in group_282

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06230 FBDBKF_06230 81.1 Morganella morganii S1 rapA RNA polymerase-associated protein RapA
EHELCC_09275 EHELCC_09275 81.1 Morganella morganii S2 rapA RNA polymerase-associated protein RapA
NLDBIP_09655 NLDBIP_09655 81.1 Morganella morganii S4 rapA RNA polymerase-associated protein RapA
LHKJJB_08100 LHKJJB_08100 81.1 Morganella morganii S3 rapA RNA polymerase-associated protein RapA
HKOGLL_07650 HKOGLL_07650 81.1 Morganella morganii S5 rapA RNA polymerase-associated protein RapA
F4V73_RS15685 F4V73_RS15685 79.0 Morganella psychrotolerans rapA RNA polymerase-associated protein RapA
PMI_RS12260 PMI_RS12260 26.5 Proteus mirabilis HI4320 - DEAD/DEAH box helicase

Distribution of the homologs in the orthogroup group_282

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_282

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4F2H6 0.0 1993 100 0 967 3 rapA RNA polymerase-associated protein RapA Proteus mirabilis (strain HI4320)
Q7N8V1 0.0 1648 81 2 970 3 rapA RNA polymerase-associated protein RapA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A1JJG0 0.0 1626 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JKV7 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66EN4 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K4B3 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FM96 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4TQB3 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis (strain Pestoides F)
Q1CMQ6 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis bv. Antiqua (strain Nepal516)
A9R154 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis bv. Antiqua (strain Angola)
Q8ZII0 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis
Q1C1Y2 0.0 1622 79 1 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis bv. Antiqua (strain Antiqua)
A8G9P6 0.0 1593 78 1 968 3 rapA RNA polymerase-associated protein RapA Serratia proteamaculans (strain 568)
C6DEY0 0.0 1568 77 0 967 3 rapA RNA polymerase-associated protein RapA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
A7MIC1 0.0 1561 76 1 968 3 rapA RNA polymerase-associated protein RapA Cronobacter sakazakii (strain ATCC BAA-894)
Q6D0E6 0.0 1556 76 0 967 3 rapA RNA polymerase-associated protein RapA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
B2VGQ6 0.0 1544 74 1 968 3 rapA RNA polymerase-associated protein RapA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q7UDT5 0.0 1541 75 1 968 3 rapA RNA polymerase-associated protein RapA Shigella flexneri
Q0T8D8 0.0 1541 75 1 968 3 rapA RNA polymerase-associated protein RapA Shigella flexneri serotype 5b (strain 8401)
B1LFZ3 0.0 1541 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain SMS-3-5 / SECEC)
Q8FL92 0.0 1541 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLT1 0.0 1541 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7NHG5 0.0 1541 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7UIA5 0.0 1541 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A1A7A6 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O1:K1 / APEC
A7ZW09 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O9:H4 (strain HS)
B7M0F4 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O8 (strain IAI1)
A7ZHF0 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O139:H28 (strain E24377A / ETEC)
Q1RGE0 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain UTI89 / UPEC)
B6HZ39 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain SE11)
B7N7T3 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P60240 0.0 1540 75 1 968 1 rapA RNA polymerase-associated protein RapA Escherichia coli (strain K12)
B1IRB9 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
C4ZPY3 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain K12 / MC4100 / BW2952)
P60241 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O157:H7
B7L4I0 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain 55989 / EAEC)
B7MAI2 0.0 1540 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O45:K1 (strain S88 / ExPEC)
B7LVT0 0.0 1539 75 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q3Z5V2 0.0 1538 74 1 968 3 rapA RNA polymerase-associated protein RapA Shigella sonnei (strain Ss046)
B2U265 0.0 1537 74 1 968 3 rapA RNA polymerase-associated protein RapA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B7MNR6 0.0 1537 74 1 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O81 (strain ED1a)
A6T4J7 0.0 1536 74 1 968 3 rapA RNA polymerase-associated protein RapA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q326H6 0.0 1536 74 1 968 3 rapA RNA polymerase-associated protein RapA Shigella boydii serotype 4 (strain Sb227)
B5Y1Y4 0.0 1533 74 1 968 3 rapA RNA polymerase-associated protein RapA Klebsiella pneumoniae (strain 342)
Q32K36 0.0 1532 74 1 968 3 rapA RNA polymerase-associated protein RapA Shigella dysenteriae serotype 1 (strain Sd197)
A4W6G3 0.0 1528 74 1 968 3 rapA RNA polymerase-associated protein RapA Enterobacter sp. (strain 638)
A9MQF6 0.0 1526 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B4TWU3 0.0 1525 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella schwarzengrund (strain CVM19633)
A9MYN1 0.0 1525 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B5R1T4 0.0 1525 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella enteritidis PT4 (strain P125109)
B5FI41 0.0 1525 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella dublin (strain CT_02021853)
B5F778 0.0 1525 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella agona (strain SL483)
Q57TG4 0.0 1524 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella choleraesuis (strain SC-B67)
Q8ZRV8 0.0 1524 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
C0Q5F4 0.0 1524 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella paratyphi C (strain RKS4594)
B5BL33 0.0 1523 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella paratyphi A (strain AKU_12601)
Q5PDF0 0.0 1523 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z9J4 0.0 1523 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella typhi
B4SU17 0.0 1523 74 1 968 3 rapA RNA polymerase-associated protein RapA Salmonella newport (strain SL254)
A8ALP3 0.0 1522 74 1 968 3 rapA RNA polymerase-associated protein RapA Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q2NVX0 0.0 1463 73 1 968 3 rapA RNA polymerase-associated protein RapA Sodalis glossinidius (strain morsitans)
B5FGE9 0.0 1309 63 3 969 3 rapA RNA polymerase-associated protein RapA Aliivibrio fischeri (strain MJ11)
Q87LD0 0.0 1301 62 3 969 3 rapA RNA polymerase-associated protein RapA Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
B6EPV7 0.0 1295 63 3 969 3 rapA RNA polymerase-associated protein RapA Aliivibrio salmonicida (strain LFI1238)
Q8DCG1 0.0 1289 63 4 970 3 rapA RNA polymerase-associated protein RapA Vibrio vulnificus (strain CMCP6)
C3LR47 0.0 1289 62 3 969 3 rapA RNA polymerase-associated protein RapA Vibrio cholerae serotype O1 (strain M66-2)
Q9KP70 0.0 1289 62 3 969 3 rapA RNA polymerase-associated protein RapA Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q6LV34 0.0 1288 63 3 971 3 rapA RNA polymerase-associated protein RapA Photobacterium profundum (strain SS9)
Q5E881 0.0 1288 64 4 948 3 rapA RNA polymerase-associated protein RapA Aliivibrio fischeri (strain ATCC 700601 / ES114)
A5F5C5 0.0 1288 62 3 969 3 rapA RNA polymerase-associated protein RapA Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q7MHE6 0.0 1286 63 4 970 3 rapA RNA polymerase-associated protein RapA Vibrio vulnificus (strain YJ016)
B7VIC2 0.0 1283 62 3 969 3 rapA RNA polymerase-associated protein RapA Vibrio atlanticus (strain LGP32)
A7MSB2 0.0 1265 61 3 969 3 rapA RNA polymerase-associated protein RapA Vibrio campbellii (strain ATCC BAA-1116)
A0KGL5 0.0 1184 57 4 968 3 rapA RNA polymerase-associated protein RapA Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
A4SR75 0.0 1172 57 5 970 3 rapA RNA polymerase-associated protein RapA Aeromonas salmonicida (strain A449)
Q0HR19 0.0 1156 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella sp. (strain MR-7)
Q0HMR2 0.0 1155 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella sp. (strain MR-4)
A0KSP4 0.0 1153 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella sp. (strain ANA-3)
A6WSX5 0.0 1152 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella baltica (strain OS185)
A9L3Y2 0.0 1152 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella baltica (strain OS195)
B8ECC6 0.0 1152 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella baltica (strain OS223)
A8FQW4 0.0 1151 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella sediminis (strain HAW-EB3)
A3D001 0.0 1150 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella baltica (strain OS155 / ATCC BAA-1091)
Q07XC8 0.0 1147 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella frigidimarina (strain NCIMB 400)
Q8EJ93 0.0 1145 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
A4YAN1 0.0 1145 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Q12RU8 0.0 1145 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
A1RFP5 0.0 1144 54 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella sp. (strain W3-18-1)
A3QA31 0.0 1142 54 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella loihica (strain ATCC BAA-1088 / PV-4)
B1KJA5 0.0 1137 54 4 970 3 rapA RNA polymerase-associated protein RapA Shewanella woodyi (strain ATCC 51908 / MS32)
B8CIB4 0.0 1137 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella piezotolerans (strain WP3 / JCM 13877)
B0TVM8 0.0 1135 54 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella halifaxensis (strain HAW-EB4)
B3H0F9 0.0 1132 56 6 973 3 rapA RNA polymerase-associated protein RapA Actinobacillus pleuropneumoniae serotype 7 (strain AP76)
A3MZ32 0.0 1132 56 6 973 3 rapA RNA polymerase-associated protein RapA Actinobacillus pleuropneumoniae serotype 5b (strain L20)
Q9CK01 0.0 1131 57 4 969 3 rapA RNA polymerase-associated protein RapA Pasteurella multocida (strain Pm70)
A8H8X8 0.0 1130 54 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
A1SAC7 0.0 1122 55 3 969 3 rapA RNA polymerase-associated protein RapA Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
B0BT63 0.0 1116 56 6 973 3 rapA RNA polymerase-associated protein RapA Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
A6VQU2 0.0 1105 55 5 969 3 rapA RNA polymerase-associated protein RapA Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
Q7VKV0 0.0 1099 55 6 976 3 rapA RNA polymerase-associated protein RapA Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q0I5G1 0.0 1068 55 5 969 3 rapA RNA polymerase-associated protein RapA Histophilus somni (strain 129Pt)
B0URM0 0.0 1063 54 5 969 3 rapA RNA polymerase-associated protein RapA Histophilus somni (strain 2336)
P44781 0.0 1015 51 5 970 3 rapA RNA polymerase-associated protein RapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q4QMI0 0.0 1014 51 5 970 3 rapA RNA polymerase-associated protein RapA Haemophilus influenzae (strain 86-028NP)
A5UAT0 0.0 1013 51 5 970 3 rapA RNA polymerase-associated protein RapA Haemophilus influenzae (strain PittEE)
Q1IDS5 0.0 935 50 10 965 3 rapA RNA polymerase-associated protein RapA Pseudomonas entomophila (strain L48)
Q9HYT6 0.0 933 50 8 967 3 rapA RNA polymerase-associated protein RapA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
B7V6T4 0.0 933 50 8 967 3 rapA RNA polymerase-associated protein RapA Pseudomonas aeruginosa (strain LESB58)
A4VNR4 0.0 928 51 8 965 3 rapA RNA polymerase-associated protein RapA Stutzerimonas stutzeri (strain A1501)
B0KU95 0.0 926 50 12 967 3 rapA RNA polymerase-associated protein RapA Pseudomonas putida (strain GB-1)
Q4ZPQ0 0.0 926 50 9 964 3 rapA RNA polymerase-associated protein RapA Pseudomonas syringae pv. syringae (strain B728a)
Q3KGV8 0.0 926 50 8 964 3 rapA RNA polymerase-associated protein RapA Pseudomonas fluorescens (strain Pf0-1)
Q88NR0 0.0 925 50 10 966 3 rapA RNA polymerase-associated protein RapA Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
B1J1F5 0.0 924 50 13 970 3 rapA RNA polymerase-associated protein RapA Pseudomonas putida (strain W619)
C3K902 0.0 922 50 8 964 3 rapA RNA polymerase-associated protein RapA Pseudomonas fluorescens (strain SBW25)
Q4KH47 0.0 922 49 8 965 3 rapA RNA polymerase-associated protein RapA Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
Q87XS2 0.0 921 50 8 961 3 rapA RNA polymerase-associated protein RapA Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q48LP5 0.0 921 50 8 961 3 rapA RNA polymerase-associated protein RapA Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
A5VZN0 0.0 920 50 10 966 3 rapA RNA polymerase-associated protein RapA Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
P54509 2.18e-22 106 32 6 214 3 yqhH Uncharacterized ATP-dependent helicase YqhH Bacillus subtilis (strain 168)
P54509 8.44e-15 82 35 2 130 3 yqhH Uncharacterized ATP-dependent helicase YqhH Bacillus subtilis (strain 168)
P41410 8.92e-11 69 22 19 490 1 rhp54 DNA repair protein rhp54 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A4PBL4 2.12e-10 68 22 20 504 1 RAD54 DNA repair and recombination protein RAD54 Oryza sativa subsp. japonica
B3MMA5 1.18e-08 62 22 21 583 3 okr DNA repair and recombination protein RAD54-like Drosophila ananassae
O76460 4.06e-08 61 22 22 591 1 okr DNA repair and recombination protein RAD54-like Drosophila melanogaster
Q0PCS3 4.86e-08 60 22 18 474 1 CHR25 Protein CHROMATIN REMODELING 25 Arabidopsis thaliana
O13762 5.3e-08 60 25 4 184 3 SPAC17A2.12 Uncharacterized ATP-dependent helicase C17A2.12 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
B4MX21 1.05e-07 59 22 25 604 3 okr DNA repair and recombination protein RAD54-like Drosophila willistoni
Q8MNV7 1.24e-07 59 28 6 176 3 smrc-1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 homolog Caenorhabditis elegans
F4IV99 4.45e-07 58 28 7 185 1 CHR5 Protein CHROMATIN REMODELING 5 Arabidopsis thaliana
B3NAN8 9.52e-07 56 22 22 579 3 okr DNA repair and recombination protein RAD54-like Drosophila erecta
O60177 1.03e-06 56 30 0 102 3 SPBC23E6.02 Uncharacterized ATP-dependent helicase C23E6.02 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O60177 2.89e-05 52 25 8 193 3 SPBC23E6.02 Uncharacterized ATP-dependent helicase C23E6.02 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
B4NXB8 1.06e-06 56 22 22 579 3 okr DNA repair and recombination protein RAD54-like Drosophila yakuba
P28370 1.84e-06 55 28 7 175 1 SMARCA1 Probable global transcription activator SNF2L1 Homo sapiens
Q9GQN5 1.92e-06 55 24 8 231 1 XNP Transcriptional regulator ATRX homolog Drosophila melanogaster
Q29KH2 2.12e-06 55 22 24 582 3 okr DNA repair and recombination protein RAD54-like Drosophila pseudoobscura pseudoobscura
Q6PGB8 2.29e-06 55 29 8 176 1 Smarca1 Probable global transcription activator SNF2L1 Mus musculus
Q8TD26 5.5e-06 54 25 5 186 1 CHD6 Chromodomain-helicase-DNA-binding protein 6 Homo sapiens
D3ZA12 5.93e-06 54 26 5 186 1 Chd6 Chromodomain-helicase-DNA-binding protein 6 Rattus norvegicus
Q10332 6.9e-06 53 31 2 112 1 SPBC582.10c Uncharacterized ATP-dependent helicase C582.10c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A3KFM7 8.67e-06 53 25 5 186 1 Chd6 Chromodomain-helicase-DNA-binding protein 6 Mus musculus
E1BB03 1.17e-05 53 26 8 222 3 ZRANB3 DNA annealing helicase and endonuclease ZRANB3 Bos taurus
B0R0I6 2e-05 52 25 4 186 3 chd8 Chromodomain-helicase-DNA-binding protein 8 Danio rerio
Q9P2D1 2.85e-05 52 26 5 186 1 CHD7 Chromodomain-helicase-DNA-binding protein 7 Homo sapiens
A2AJK6 3.07e-05 52 26 5 186 1 Chd7 Chromodomain-helicase-DNA-binding protein 7 Mus musculus
Q06A37 3.18e-05 52 26 5 186 2 CHD7 Chromodomain-helicase-DNA-binding protein 7 Gallus gallus
P38144 3.21e-05 52 26 11 215 1 ISW1 ISWI chromatin-remodeling complex ATPase ISW1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q8BYH8 4.33e-05 51 25 4 188 1 Chd9 Chromodomain-helicase-DNA-binding protein 9 Mus musculus
Q9JIX5 4.64e-05 51 21 13 460 1 Chd8 Chromodomain-helicase-DNA-binding protein 8 Rattus norvegicus
Q3L8U1 4.68e-05 51 25 4 188 1 CHD9 Chromodomain-helicase-DNA-binding protein 9 Homo sapiens
Q09XV5 4.84e-05 51 21 13 460 1 Chd8 Chromodomain-helicase-DNA-binding protein 8 Mus musculus
A5AA68 4.86e-05 50 27 4 149 3 dbp8 ATP-dependent RNA helicase dbp8 Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
B5BT18 5.1e-05 51 27 6 162 1 BTAF1 TATA-binding protein-associated factor BTAF1 Arabidopsis thaliana
O60264 5.3e-05 51 27 7 176 1 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 Homo sapiens
Q9FLB0 5.88e-05 50 26 3 140 2 RH18 DEAD-box ATP-dependent RNA helicase 18 Arabidopsis thaliana
A7TJI3 6.25e-05 50 26 7 195 3 INO80 Chromatin-remodeling ATPase INO80 Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17)
O74842 7.12e-05 50 27 8 233 1 fft2 ATP-dependent helicase fft2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
C0H4W3 7.67e-05 50 28 9 179 1 PF08_0048 Probable ATP-dependent helicase PF08_0048 Plasmodium falciparum (isolate 3D7)
A6QQR4 8.53e-05 50 29 6 165 2 ERCC6L DNA excision repair protein ERCC-6-like Bos taurus
Q2NKX8 9.21e-05 50 27 4 150 1 ERCC6L DNA excision repair protein ERCC-6-like Homo sapiens
Q60848 9.88e-05 50 24 4 176 1 Hells Lymphocyte-specific helicase Mus musculus
P34580 0.000107 49 26 3 118 3 T26G10.1 Putative ATP-dependent RNA helicase T26G10.1 Caenorhabditis elegans
P41447 0.000117 49 31 7 132 3 GTA Probable global transactivator Autographa californica nuclear polyhedrosis virus
Q91ZW3 0.000123 50 27 8 179 1 Smarca5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 Mus musculus
B4GS98 0.00013 49 22 27 593 3 okr DNA repair and recombination protein RAD54-like Drosophila persimilis
A1CKJ0 0.000133 49 26 4 149 3 dbp8 ATP-dependent RNA helicase dbp8 Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107)
P41877 0.000135 49 28 8 176 1 isw-1 Chromatin-remodeling complex ATPase chain isw-1 Caenorhabditis elegans
Q6FV37 0.000148 49 25 8 199 3 INO80 Chromatin-remodeling ATPase INO80 Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138)
Q8BHK9 0.000149 49 28 5 150 1 Ercc6l DNA excision repair protein ERCC-6-like Mus musculus
Q9NRZ9 0.000152 49 25 5 176 1 HELLS Lymphoid-specific helicase Homo sapiens
Q2UKX3 0.000164 48 29 2 103 3 dbp8 ATP-dependent RNA helicase dbp8 Aspergillus oryzae (strain ATCC 42149 / RIB 40)
A6ZU34 0.000164 49 24 7 187 3 INO80 Chromatin-remodeling ATPase INO80 Saccharomyces cerevisiae (strain YJM789)
P53115 0.000166 49 24 7 187 1 INO80 Chromatin-remodeling ATPase INO80 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q0P4U8 0.000175 49 25 9 194 2 smarcal1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 Xenopus tropicalis
Q9LHE4 0.000184 49 28 0 120 1 CHR27 Helicase-like transcription factor CHR27 Arabidopsis thaliana
F4KBP5 0.000192 49 28 9 193 2 CHR4 Protein CHROMATIN REMODELING 4 Arabidopsis thaliana
Q74Z27 0.0002 49 26 8 200 3 INO80 Chromatin-remodeling ATPase INO80 Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
Q94BR5 0.000234 48 30 0 90 1 CHR28 Helicase-like transcription factor CHR28 Arabidopsis thaliana
F4K128 0.000243 48 25 8 201 2 CHR23 Probable ATP-dependent DNA helicase CHR23 Arabidopsis thaliana
Q5FWF4 0.000263 48 27 8 209 1 ZRANB3 DNA annealing helicase and endonuclease ZRANB3 Homo sapiens
A2BGR3 0.000282 48 27 8 193 1 ercc6l DNA excision repair protein ERCC-6-like Danio rerio
Q8GXD6 0.000283 48 28 3 128 2 RH49 DEAD-box ATP-dependent RNA helicase 49 Arabidopsis thaliana
Q9C8J1 0.000296 48 28 4 132 2 RH34 DEAD-box ATP-dependent RNA helicase 34 Arabidopsis thaliana
Q4WXW1 0.000307 48 29 2 103 3 dbp8 ATP-dependent RNA helicase dbp8 Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
A3LP87 0.000315 48 24 5 181 3 DBP8 ATP-dependent RNA helicase DBP8 Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
Q86WJ1 0.00033 48 28 12 216 1 CHD1L Chromodomain-helicase-DNA-binding protein 1-like Homo sapiens
Q6CNY4 0.00034 48 25 8 187 3 INO80 Chromatin-remodeling ATPase INO80 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Q8BJL0 0.000367 48 24 7 198 1 Smarcal1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 Mus musculus
Q8TDI0 0.00037 48 27 7 193 1 CHD5 Chromodomain-helicase-DNA-binding protein 5 Homo sapiens
A5E0U9 0.000398 47 25 6 182 3 DBP8 ATP-dependent RNA helicase DBP8 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
Q9ULG1 0.000409 48 27 8 182 1 INO80 Chromatin-remodeling ATPase INO80 Homo sapiens
Q6ZPV2 0.000409 48 27 8 182 1 Ino80 Chromatin-remodeling ATPase INO80 Mus musculus
B9XXL6 0.000455 47 26 2 113 1 rhpA DEAD-box ATP-dependent RNA helicase RhpA Helicobacter pylori (strain B128)
Q0UG82 0.000465 48 27 9 187 3 INO80 Chromatin-remodeling ATPase INO80 Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
B5DE69 0.00047 48 24 4 186 2 chd8 Chromodomain-helicase-DNA-binding protein 8 Xenopus tropicalis
Q24368 0.000508 47 27 9 178 1 Iswi Chromatin-remodeling complex ATPase chain Iswi Drosophila melanogaster
F4IV45 0.000511 47 22 8 245 3 CHR10 Probable helicase CHR10 Arabidopsis thaliana
O97159 0.000524 48 26 6 194 1 Mi-2 Chromodomain-helicase-DNA-binding protein Mi-2 homolog Drosophila melanogaster
Q9HCK8 0.000541 48 26 5 188 1 CHD8 Chromodomain-helicase-DNA-binding protein 8 Homo sapiens
A5E0W5 0.000542 47 26 8 195 3 INO80 Chromatin-remodeling ATPase INO80 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
Q6CXW0 0.000549 47 26 3 113 3 DBP8 ATP-dependent RNA helicase DBP8 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Q3B7N1 0.000599 47 28 11 203 2 CHD1L Chromodomain-helicase-DNA-binding protein 1-like Bos taurus
O60173 0.000646 47 34 0 55 3 dbp7 ATP-dependent RNA helicase dbp7 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8GUG7 0.000672 47 24 4 162 2 RH50 DEAD-box ATP-dependent RNA helicase 50 Arabidopsis thaliana
Q0U8V9 0.000724 47 28 2 102 3 DBP8 ATP-dependent RNA helicase DBP8 Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
F4J9M5 0.000788 47 26 7 199 2 CHR12 Probable ATP-dependent DNA helicase CHR12 Arabidopsis thaliana
Q9NZC9 0.000798 47 25 5 171 1 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 Homo sapiens
Q5A310 0.000809 47 24 8 213 2 ISW2 ISWI chromatin-remodeling complex ATPase ISW2 Candida albicans (strain SC5314 / ATCC MYA-2876)
A1D6X9 0.00081 47 28 2 103 3 dbp8 ATP-dependent RNA helicase dbp8 Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181)
O14148 0.000829 47 27 8 187 1 ino80 Chromatin-remodeling ATPase INO80 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q6PDQ2 0.000839 47 25 7 193 1 Chd4 Chromodomain-helicase-DNA-binding protein 4 Mus musculus
Q9NDJ2 0.000845 47 26 7 176 1 dom Helicase domino Drosophila melanogaster
A7ZI07 0.000899 47 24 2 136 1 zorD Zorya protein ZorD Escherichia coli O139:H28 (strain E24377A / ETEC)
Q9UNY4 0.001 47 28 4 139 1 TTF2 Transcription termination factor 2 Homo sapiens
Q9LK10 0.001 47 30 4 126 1 CLSY4 SNF2 domain-containing protein CLASSY 4 Arabidopsis thaliana
Q14839 0.001 47 25 7 193 1 CHD4 Chromodomain-helicase-DNA-binding protein 4 Homo sapiens

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11515
Feature type CDS
Gene rapA
Product RNA polymerase-associated protein RapA
Location 2537417 - 2540320 (strand: 1)
Length 2904 (nucleotides) / 967 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_282
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF00176 SNF2-related domain
PF00271 Helicase conserved C-terminal domain
PF12137 RNA polymerase recycling family C-terminal
PF18337 RapA N-terminal Tudor like domain
PF18339 RapA N-terminal Tudor like domain 1

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0553 Transcription (K)
Replication, recombination and repair (L)		 KL Superfamily II DNA or RNA helicase, SNF2 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03580 ATP-dependent helicase HepA [EC:5.6.2.-] - -

Protein Sequence

MPFTLGQRWISDTESELGLGTVVAIDARMVTLLFPACGENRLYSRHDAPITRVMFNVGDTVTSHEGWKLAIDNVVEDNGLLIYHGVRLDTEEPAQLREVFLDNKLTFNKPQDRLFAGQIDRMDRFALRYRARKFMSEQFKQAQSGLRGIRASLIPHQLYIANEVGKRHNPRVLLADEVGLGKTIEAGMIIHQQIMDGRAERVLIIVPESLQHQWLVEMLRRFNLRFSLFDDSRYSESLLDSDNPFETEQMIICSLDFVRKNKQRFEHLVEATWDMLVVDEAHHLVWSEKAPSREYQVIETLAEAIPSVLLLTATPEQLGQESHFARLRLLDPNRFHDYNEFINEQQKYRPVADAVTILLSEDDLNNEQQNSISEMISEQDIEPLLKASNTQGEERTKSRQALIHMLMDRHGTGRLLFRNTRSGVKGFPNRLLHAIKMPLPTQYQTAIKVAEIMAAKKSLEVRAKEMLYPERIYQEFEGENATWWNFDPRVEWLLGFLTANRHEKVLVICAQAATALQLEQVLREREGIRAAVFHEGMSLLERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQNRDIDISVPYLEGTAQSVLLRWYHEGLDAFEHTCPTGRTIYDNEYDALVNYLAQPNELGDFDKFIVSCRKQHDEMKLKLEQGRDRLLEMHSNGGEVGVELANKIAEQDNDPDLVNFALNLFDIVGINQEDRSDSLIVLTPSDHMLVPDFPGLPQDGCTITFDREHALSREDTQFISWEHPIIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLVELIYVVEAQAPKHLHLTRFLPATPVRLLLDLKGNNLASQVEFESFNRQLNAVNRHTSSKLVNAVQNEVHHVLKASESLMEAEAKTLIEQAKQEADNALTHELSRLEALRAVNPNIRDDEVEAIENERTHILNHLDEATWRLDAIRLIVVTHQ

Flanking regions ( +/- flanking 50bp)

CATTAATAATGATTTTATAAATTATATATTTGAGAGCTGAGTTTATATATATGCCTTTTACTCTTGGTCAACGTTGGATTAGCGATACAGAAAGCGAACTTGGACTAGGTACTGTTGTGGCAATTGATGCCCGTATGGTGACCTTACTTTTTCCTGCATGTGGCGAAAATCGTCTTTATTCCCGCCATGATGCCCCAATAACGCGGGTGATGTTTAATGTGGGGGATACTGTCACCAGTCATGAAGGCTGGAAGCTCGCCATCGACAACGTTGTGGAAGATAATGGCTTACTTATTTATCACGGCGTACGTTTAGATACCGAAGAGCCAGCACAACTGCGTGAAGTATTCTTAGATAACAAACTCACTTTTAATAAGCCACAAGATCGTCTTTTTGCTGGTCAAATAGACCGTATGGATCGTTTTGCTTTACGCTATCGTGCGCGTAAATTTATGAGCGAACAGTTTAAGCAAGCACAAAGTGGTCTACGTGGTATTCGCGCAAGTCTTATTCCTCATCAGCTCTATATTGCGAATGAAGTGGGTAAACGTCATAACCCACGTGTTTTATTAGCGGATGAAGTTGGGCTGGGTAAAACTATCGAAGCGGGTATGATAATCCACCAGCAAATCATGGATGGACGCGCTGAGCGTGTTTTAATTATCGTTCCTGAAAGCTTACAACATCAGTGGTTAGTTGAGATGTTACGTCGTTTCAACCTACGTTTTTCACTGTTTGATGATAGCCGTTATAGCGAATCTTTATTAGATAGCGATAATCCTTTCGAAACAGAGCAGATGATCATTTGCTCATTAGACTTTGTGCGTAAAAACAAACAACGCTTTGAACACCTTGTTGAAGCGACTTGGGATATGTTAGTTGTCGATGAAGCCCACCATCTGGTATGGAGTGAAAAGGCACCAAGCCGAGAATACCAAGTTATCGAAACGCTGGCTGAAGCGATCCCTTCTGTATTGTTATTAACCGCAACACCGGAGCAACTTGGTCAAGAGAGCCATTTTGCCCGCTTACGTTTGCTCGATCCTAATCGTTTCCACGATTACAACGAATTTATTAATGAACAACAAAAATATCGCCCCGTGGCCGATGCGGTAACCATTTTGCTTTCAGAAGATGATTTAAATAACGAACAGCAAAATAGCATCAGTGAGATGATCAGCGAGCAAGATATAGAGCCGTTGCTAAAAGCCTCTAATACCCAAGGTGAAGAGCGTACAAAATCTCGCCAAGCACTTATTCATATGTTGATGGATAGACACGGTACGGGTCGTCTGTTATTTCGCAATACTCGCTCCGGCGTCAAAGGCTTCCCTAACCGACTGTTGCACGCAATAAAAATGCCACTACCAACTCAGTATCAAACCGCCATTAAGGTGGCTGAGATTATGGCAGCGAAAAAGAGCCTCGAAGTACGAGCAAAAGAGATGCTCTATCCTGAACGTATCTACCAAGAGTTTGAAGGTGAAAATGCCACATGGTGGAACTTTGATCCACGCGTTGAATGGCTACTAGGCTTTTTAACCGCCAATCGTCATGAAAAAGTATTAGTCATTTGTGCTCAAGCCGCCACAGCATTGCAATTAGAACAAGTTTTACGTGAACGTGAAGGTATTCGTGCTGCAGTATTCCATGAAGGGATGTCTTTACTTGAACGAGATCGTGCAGCCGCTTATTTCGCCTCAGAAGAGGAAGGCGCACAAGTGTTACTATGTTCTGAAATCGGTTCAGAAGGGCGTAACTTCCAATTTGCTAATCAACTAGTGATGTTTGATCTCCCCTTTAATCCTGATTTATTAGAACAACGTATTGGTCGTCTTGATCGTATCGGTCAAAACCGCGACATTGATATCAGTGTGCCTTATCTTGAAGGAACCGCTCAATCTGTTCTATTACGTTGGTATCACGAAGGGTTAGATGCATTTGAACATACCTGCCCGACGGGTCGTACAATTTATGACAACGAATATGATGCGCTAGTCAATTATCTTGCTCAACCTAATGAACTAGGTGATTTTGATAAGTTTATCGTTTCTTGTCGTAAGCAACATGATGAGATGAAACTCAAACTAGAACAAGGTCGTGACCGTCTATTAGAAATGCACTCTAACGGCGGTGAAGTTGGCGTTGAGTTAGCGAATAAGATTGCAGAGCAAGATAACGATCCCGATCTGGTTAACTTCGCCTTAAACTTATTTGATATTGTGGGCATTAACCAAGAAGATCGTAGTGATAGCTTAATTGTATTAACGCCATCAGATCATATGTTAGTTCCTGACTTCCCTGGATTACCGCAAGATGGTTGTACAATTACCTTTGATAGAGAGCACGCACTCTCTCGTGAAGATACGCAATTTATCAGTTGGGAACATCCTATTATCCGTAATGGTTTAGATTTAGTCTTATCTGGTGATACAGGTAGTTGTGCGGTTTCTTTATTGAAAAACAAAGCATTACCTGTAGGTACGCTATTAGTTGAACTGATTTATGTCGTAGAAGCGCAAGCCCCTAAACATCTTCATTTAACTCGCTTCTTACCGGCAACTCCAGTACGCTTATTACTTGATTTAAAAGGTAATAATCTTGCATCACAAGTTGAATTTGAAAGTTTTAACCGCCAATTAAATGCGGTAAATCGCCACACATCCAGCAAATTGGTCAATGCGGTACAAAATGAAGTTCATCATGTACTAAAAGCATCTGAATCCTTAATGGAAGCGGAAGCGAAAACGCTAATTGAACAAGCGAAGCAAGAAGCTGACAACGCATTAACACATGAGTTATCACGCTTAGAGGCATTACGTGCCGTTAACCCAAATATACGTGATGACGAAGTTGAAGCAATTGAAAATGAGCGTACGCATATTCTTAACCACTTAGATGAAGCGACATGGCGCTTAGATGCGATCCGTTTAATTGTTGTTACCCACCAATAATCACTGTTAAAACGGGGGAAAGCTTTATCTCCCCCGTTATTTTGCTGAGA