Homologs in group_282

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06230 FBDBKF_06230 93.3 Morganella morganii S1 rapA RNA polymerase-associated protein RapA
EHELCC_09275 EHELCC_09275 93.3 Morganella morganii S2 rapA RNA polymerase-associated protein RapA
NLDBIP_09655 NLDBIP_09655 93.3 Morganella morganii S4 rapA RNA polymerase-associated protein RapA
LHKJJB_08100 LHKJJB_08100 93.3 Morganella morganii S3 rapA RNA polymerase-associated protein RapA
HKOGLL_07650 HKOGLL_07650 93.3 Morganella morganii S5 rapA RNA polymerase-associated protein RapA
PMI_RS11515 PMI_RS11515 79.0 Proteus mirabilis HI4320 rapA RNA polymerase-associated protein RapA
PMI_RS12260 PMI_RS12260 26.6 Proteus mirabilis HI4320 - DEAD/DEAH box helicase

Distribution of the homologs in the orthogroup group_282

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_282

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4F2H6 0.0 1602 78 1 968 3 rapA RNA polymerase-associated protein RapA Proteus mirabilis (strain HI4320)
Q7N8V1 0.0 1580 77 1 970 3 rapA RNA polymerase-associated protein RapA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A1JJG0 0.0 1572 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A8G9P6 0.0 1569 77 0 968 3 rapA RNA polymerase-associated protein RapA Serratia proteamaculans (strain 568)
B1JKV7 0.0 1567 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66EN4 0.0 1567 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K4B3 0.0 1567 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FM96 0.0 1567 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4TQB3 0.0 1566 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis (strain Pestoides F)
Q1CMQ6 0.0 1566 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis bv. Antiqua (strain Nepal516)
A9R154 0.0 1566 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis bv. Antiqua (strain Angola)
Q8ZII0 0.0 1566 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis
Q1C1Y2 0.0 1566 77 0 968 3 rapA RNA polymerase-associated protein RapA Yersinia pestis bv. Antiqua (strain Antiqua)
A7MIC1 0.0 1561 76 0 968 3 rapA RNA polymerase-associated protein RapA Cronobacter sakazakii (strain ATCC BAA-894)
B2VGQ6 0.0 1548 74 0 968 3 rapA RNA polymerase-associated protein RapA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A1A7A6 0.0 1548 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O1:K1 / APEC
A6T4J7 0.0 1547 75 0 968 3 rapA RNA polymerase-associated protein RapA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B1LFZ3 0.0 1547 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain SMS-3-5 / SECEC)
Q8FL92 0.0 1547 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLT1 0.0 1547 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7NHG5 0.0 1547 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7UIA5 0.0 1547 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q7UDT5 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Shigella flexneri
Q0T8D8 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Shigella flexneri serotype 5b (strain 8401)
Q1RGE0 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain UTI89 / UPEC)
B6HZ39 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain SE11)
B7N7T3 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P60240 0.0 1546 74 0 968 1 rapA RNA polymerase-associated protein RapA Escherichia coli (strain K12)
B1IRB9 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
C4ZPY3 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain K12 / MC4100 / BW2952)
B7M0F4 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O8 (strain IAI1)
P60241 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O157:H7
B7L4I0 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli (strain 55989 / EAEC)
B7MAI2 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O45:K1 (strain S88 / ExPEC)
A7ZHF0 0.0 1546 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O139:H28 (strain E24377A / ETEC)
A4W6G3 0.0 1546 75 0 968 3 rapA RNA polymerase-associated protein RapA Enterobacter sp. (strain 638)
Q3Z5V2 0.0 1545 74 0 968 3 rapA RNA polymerase-associated protein RapA Shigella sonnei (strain Ss046)
A7ZW09 0.0 1545 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O9:H4 (strain HS)
B2U265 0.0 1544 74 0 968 3 rapA RNA polymerase-associated protein RapA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q326H6 0.0 1544 74 0 968 3 rapA RNA polymerase-associated protein RapA Shigella boydii serotype 4 (strain Sb227)
B7LVT0 0.0 1544 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B5Y1Y4 0.0 1543 75 0 968 3 rapA RNA polymerase-associated protein RapA Klebsiella pneumoniae (strain 342)
Q32K36 0.0 1541 74 0 968 3 rapA RNA polymerase-associated protein RapA Shigella dysenteriae serotype 1 (strain Sd197)
B7MNR6 0.0 1540 74 0 968 3 rapA RNA polymerase-associated protein RapA Escherichia coli O81 (strain ED1a)
A9MQF6 0.0 1532 74 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B4TWU3 0.0 1530 74 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella schwarzengrund (strain CVM19633)
A9MYN1 0.0 1530 74 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B5R1T4 0.0 1530 74 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella enteritidis PT4 (strain P125109)
B5FI41 0.0 1530 74 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella dublin (strain CT_02021853)
Q57TG4 0.0 1530 74 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella choleraesuis (strain SC-B67)
B5F778 0.0 1530 74 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella agona (strain SL483)
Q8ZRV8 0.0 1529 74 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
C0Q5F4 0.0 1528 73 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella paratyphi C (strain RKS4594)
B4SU17 0.0 1528 73 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella newport (strain SL254)
Q8Z9J4 0.0 1527 73 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella typhi
B5BL33 0.0 1527 73 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella paratyphi A (strain AKU_12601)
Q5PDF0 0.0 1527 73 0 968 3 rapA RNA polymerase-associated protein RapA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
A8ALP3 0.0 1526 73 0 968 3 rapA RNA polymerase-associated protein RapA Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
C6DEY0 0.0 1513 75 1 968 3 rapA RNA polymerase-associated protein RapA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D0E6 0.0 1504 74 1 968 3 rapA RNA polymerase-associated protein RapA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q2NVX0 0.0 1447 71 0 968 3 rapA RNA polymerase-associated protein RapA Sodalis glossinidius (strain morsitans)
B5FGE9 0.0 1286 62 2 969 3 rapA RNA polymerase-associated protein RapA Aliivibrio fischeri (strain MJ11)
Q8DCG1 0.0 1276 62 2 969 3 rapA RNA polymerase-associated protein RapA Vibrio vulnificus (strain CMCP6)
Q7MHE6 0.0 1275 62 2 969 3 rapA RNA polymerase-associated protein RapA Vibrio vulnificus (strain YJ016)
Q6LV34 0.0 1270 61 2 971 3 rapA RNA polymerase-associated protein RapA Photobacterium profundum (strain SS9)
B6EPV7 0.0 1267 62 4 973 3 rapA RNA polymerase-associated protein RapA Aliivibrio salmonicida (strain LFI1238)
Q87LD0 0.0 1267 61 2 969 3 rapA RNA polymerase-associated protein RapA Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
C3LR47 0.0 1266 61 2 969 3 rapA RNA polymerase-associated protein RapA Vibrio cholerae serotype O1 (strain M66-2)
Q9KP70 0.0 1266 61 2 969 3 rapA RNA polymerase-associated protein RapA Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F5C5 0.0 1266 61 2 969 3 rapA RNA polymerase-associated protein RapA Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q5E881 0.0 1261 63 2 941 3 rapA RNA polymerase-associated protein RapA Aliivibrio fischeri (strain ATCC 700601 / ES114)
B7VIC2 0.0 1255 60 2 969 3 rapA RNA polymerase-associated protein RapA Vibrio atlanticus (strain LGP32)
A7MSB2 0.0 1245 61 2 969 3 rapA RNA polymerase-associated protein RapA Vibrio campbellii (strain ATCC BAA-1116)
A0KGL5 0.0 1144 57 6 969 3 rapA RNA polymerase-associated protein RapA Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
A3D001 0.0 1140 55 4 970 3 rapA RNA polymerase-associated protein RapA Shewanella baltica (strain OS155 / ATCC BAA-1091)
A6WSX5 0.0 1140 55 4 970 3 rapA RNA polymerase-associated protein RapA Shewanella baltica (strain OS185)
A9L3Y2 0.0 1139 55 4 970 3 rapA RNA polymerase-associated protein RapA Shewanella baltica (strain OS195)
B8ECC6 0.0 1139 55 4 970 3 rapA RNA polymerase-associated protein RapA Shewanella baltica (strain OS223)
A4YAN1 0.0 1135 55 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
A1RFP5 0.0 1134 55 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella sp. (strain W3-18-1)
A8FQW4 0.0 1132 55 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella sediminis (strain HAW-EB3)
Q0HR19 0.0 1131 55 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella sp. (strain MR-7)
A0KSP4 0.0 1131 55 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella sp. (strain ANA-3)
A4SR75 0.0 1131 57 12 972 3 rapA RNA polymerase-associated protein RapA Aeromonas salmonicida (strain A449)
Q9CK01 0.0 1129 56 5 970 3 rapA RNA polymerase-associated protein RapA Pasteurella multocida (strain Pm70)
Q0HMR2 0.0 1129 55 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella sp. (strain MR-4)
B8CIB4 0.0 1126 55 4 970 3 rapA RNA polymerase-associated protein RapA Shewanella piezotolerans (strain WP3 / JCM 13877)
A1SAC7 0.0 1126 55 6 971 3 rapA RNA polymerase-associated protein RapA Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
B0TVM8 0.0 1123 55 4 970 3 rapA RNA polymerase-associated protein RapA Shewanella halifaxensis (strain HAW-EB4)
A8H8X8 0.0 1123 55 4 970 3 rapA RNA polymerase-associated protein RapA Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
Q8EJ93 0.0 1122 55 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q07XC8 0.0 1122 54 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella frigidimarina (strain NCIMB 400)
A3QA31 0.0 1118 54 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella loihica (strain ATCC BAA-1088 / PV-4)
Q12RU8 0.0 1114 55 6 974 3 rapA RNA polymerase-associated protein RapA Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
B3H0F9 0.0 1113 55 7 972 3 rapA RNA polymerase-associated protein RapA Actinobacillus pleuropneumoniae serotype 7 (strain AP76)
A3MZ32 0.0 1110 55 7 972 3 rapA RNA polymerase-associated protein RapA Actinobacillus pleuropneumoniae serotype 5b (strain L20)
B1KJA5 0.0 1105 54 6 973 3 rapA RNA polymerase-associated protein RapA Shewanella woodyi (strain ATCC 51908 / MS32)
B0BT63 0.0 1103 55 7 972 3 rapA RNA polymerase-associated protein RapA Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
A6VQU2 0.0 1101 55 6 970 3 rapA RNA polymerase-associated protein RapA Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
Q7VKV0 0.0 1070 54 7 975 3 rapA RNA polymerase-associated protein RapA Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q0I5G1 0.0 1046 54 6 970 3 rapA RNA polymerase-associated protein RapA Histophilus somni (strain 129Pt)
B0URM0 0.0 1040 53 6 970 3 rapA RNA polymerase-associated protein RapA Histophilus somni (strain 2336)
P44781 0.0 999 50 5 971 3 rapA RNA polymerase-associated protein RapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q4QMI0 0.0 999 50 4 971 3 rapA RNA polymerase-associated protein RapA Haemophilus influenzae (strain 86-028NP)
A5UAT0 0.0 998 50 4 971 3 rapA RNA polymerase-associated protein RapA Haemophilus influenzae (strain PittEE)
A4VNR4 0.0 933 50 6 964 3 rapA RNA polymerase-associated protein RapA Stutzerimonas stutzeri (strain A1501)
B7V6T4 0.0 932 50 7 969 3 rapA RNA polymerase-associated protein RapA Pseudomonas aeruginosa (strain LESB58)
Q9HYT6 0.0 932 50 7 969 3 rapA RNA polymerase-associated protein RapA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q3KGV8 0.0 926 49 9 967 3 rapA RNA polymerase-associated protein RapA Pseudomonas fluorescens (strain Pf0-1)
Q1IDS5 0.0 923 50 15 977 3 rapA RNA polymerase-associated protein RapA Pseudomonas entomophila (strain L48)
B1J1F5 0.0 921 49 10 968 3 rapA RNA polymerase-associated protein RapA Pseudomonas putida (strain W619)
Q87XS2 0.0 920 49 7 963 3 rapA RNA polymerase-associated protein RapA Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
C3K902 0.0 920 49 8 967 3 rapA RNA polymerase-associated protein RapA Pseudomonas fluorescens (strain SBW25)
Q4ZPQ0 0.0 919 49 7 963 3 rapA RNA polymerase-associated protein RapA Pseudomonas syringae pv. syringae (strain B728a)
Q4KH47 0.0 919 49 8 968 3 rapA RNA polymerase-associated protein RapA Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
B0KU95 0.0 919 49 14 973 3 rapA RNA polymerase-associated protein RapA Pseudomonas putida (strain GB-1)
Q88NR0 0.0 918 49 14 973 3 rapA RNA polymerase-associated protein RapA Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q48LP5 0.0 917 49 7 963 3 rapA RNA polymerase-associated protein RapA Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
A5VZN0 0.0 916 49 10 968 3 rapA RNA polymerase-associated protein RapA Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
P54509 1.68e-21 103 33 7 207 3 yqhH Uncharacterized ATP-dependent helicase YqhH Bacillus subtilis (strain 168)
P54509 8.63e-16 85 34 2 136 3 yqhH Uncharacterized ATP-dependent helicase YqhH Bacillus subtilis (strain 168)
P41410 7.84e-12 73 23 23 511 1 rhp54 DNA repair protein rhp54 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
B3MMA5 3.83e-10 67 23 20 514 3 okr DNA repair and recombination protein RAD54-like Drosophila ananassae
B4MX21 1.28e-09 65 22 19 514 3 okr DNA repair and recombination protein RAD54-like Drosophila willistoni
Q0PCS3 2.25e-09 65 23 20 487 1 CHR25 Protein CHROMATIN REMODELING 25 Arabidopsis thaliana
B4NXB8 1.72e-08 62 22 18 489 3 okr DNA repair and recombination protein RAD54-like Drosophila yakuba
B4M9A8 1.81e-08 62 22 19 489 3 okr DNA repair and recombination protein RAD54-like Drosophila virilis
B4JCS7 2.52e-08 61 22 20 513 3 okr DNA repair and recombination protein RAD54-like Drosophila grimshawi
O76460 2.89e-08 61 22 18 489 1 okr DNA repair and recombination protein RAD54-like Drosophila melanogaster
F4IV99 5.37e-08 61 30 7 185 1 CHR5 Protein CHROMATIN REMODELING 5 Arabidopsis thaliana
Q29KH2 1.05e-07 59 23 19 493 3 okr DNA repair and recombination protein RAD54-like Drosophila pseudoobscura pseudoobscura
Q9XFH4 2.37e-07 58 22 18 475 1 DDM1 ATP-dependent DNA helicase DDM1 Arabidopsis thaliana
A4PBL4 4.67e-07 57 25 4 180 1 RAD54 DNA repair and recombination protein RAD54 Oryza sativa subsp. japonica
P87114 9.84e-07 56 24 20 485 3 fft1 ATP-dependent helicase fft1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O13762 3.03e-06 55 22 3 180 3 SPAC17A2.12 Uncharacterized ATP-dependent helicase C17A2.12 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8TD26 4.46e-06 54 24 5 186 1 CHD6 Chromodomain-helicase-DNA-binding protein 6 Homo sapiens
Q10332 4.55e-06 54 30 2 112 1 SPBC582.10c Uncharacterized ATP-dependent helicase C582.10c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
D3ZA12 4.8e-06 54 25 5 186 1 Chd6 Chromodomain-helicase-DNA-binding protein 6 Rattus norvegicus
Q8MNV7 5.76e-06 53 27 6 176 3 smrc-1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 homolog Caenorhabditis elegans
A3KFM7 7.21e-06 54 24 5 186 1 Chd6 Chromodomain-helicase-DNA-binding protein 6 Mus musculus
P38144 7.59e-06 53 26 10 216 1 ISW1 ISWI chromatin-remodeling complex ATPase ISW1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A5AA68 8e-06 53 27 4 149 3 dbp8 ATP-dependent RNA helicase dbp8 Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
O60177 8.53e-06 53 31 0 102 3 SPBC23E6.02 Uncharacterized ATP-dependent helicase C23E6.02 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q4WXW1 1.15e-05 52 27 5 151 3 dbp8 ATP-dependent RNA helicase dbp8 Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
Q5FWF4 1.41e-05 53 26 7 197 1 ZRANB3 DNA annealing helicase and endonuclease ZRANB3 Homo sapiens
Q6PGB8 1.48e-05 52 29 7 170 1 Smarca1 Probable global transcription activator SNF2L1 Mus musculus
P28370 1.51e-05 52 29 7 170 1 SMARCA1 Probable global transcription activator SNF2L1 Homo sapiens
Q60848 1.82e-05 52 24 5 177 1 Hells Lymphocyte-specific helicase Mus musculus
O97159 2.44e-05 52 26 8 233 1 Mi-2 Chromodomain-helicase-DNA-binding protein Mi-2 homolog Drosophila melanogaster
Q9FLB0 3.29e-05 51 26 3 140 2 RH18 DEAD-box ATP-dependent RNA helicase 18 Arabidopsis thaliana
A1CKJ0 3.46e-05 51 27 5 151 3 dbp8 ATP-dependent RNA helicase dbp8 Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107)
P41877 3.9e-05 51 28 8 171 1 isw-1 Chromatin-remodeling complex ATPase chain isw-1 Caenorhabditis elegans
Q2UKX3 4.13e-05 50 27 5 151 3 dbp8 ATP-dependent RNA helicase dbp8 Aspergillus oryzae (strain ATCC 42149 / RIB 40)
E1BB03 5.2e-05 51 24 6 213 3 ZRANB3 DNA annealing helicase and endonuclease ZRANB3 Bos taurus
B0R0I6 5.21e-05 51 25 6 187 3 chd8 Chromodomain-helicase-DNA-binding protein 8 Danio rerio
C0H4W3 5.48e-05 51 27 8 171 1 PF08_0048 Probable ATP-dependent helicase PF08_0048 Plasmodium falciparum (isolate 3D7)
Q9P2D1 5.7e-05 51 25 5 186 1 CHD7 Chromodomain-helicase-DNA-binding protein 7 Homo sapiens
A1D6X9 5.86e-05 50 26 5 151 3 dbp8 ATP-dependent RNA helicase dbp8 Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181)
Q06A37 6.21e-05 51 25 5 186 2 CHD7 Chromodomain-helicase-DNA-binding protein 7 Gallus gallus
A2AJK6 6.58e-05 50 25 5 186 1 Chd7 Chromodomain-helicase-DNA-binding protein 7 Mus musculus
Q4I662 6.99e-05 50 27 6 150 3 DBP8 ATP-dependent RNA helicase DBP8 Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1)
Q9GQN5 8.47e-05 50 23 8 230 1 XNP Transcriptional regulator ATRX homolog Drosophila melanogaster
O16102 9.46e-05 50 27 7 195 1 Chd3 Chromodomain-helicase-DNA-binding protein 3 Drosophila melanogaster
Q9P793 9.92e-05 50 26 10 238 1 mit1 Chromatin remodeling factor mit1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8GXD6 0.000113 49 28 3 128 2 RH49 DEAD-box ATP-dependent RNA helicase 49 Arabidopsis thaliana
Q5UQD1 0.00012 49 28 2 119 3 MIMI_R458 Putative ATP-dependent RNA helicase R458 Acanthamoeba polyphaga mimivirus
B9XXL6 0.000126 49 27 2 114 1 rhpA DEAD-box ATP-dependent RNA helicase RhpA Helicobacter pylori (strain B128)
Q4P328 0.000128 50 30 9 179 3 SWR1 Helicase SWR1 Ustilago maydis (strain 521 / FGSC 9021)
Q9NRZ9 0.000139 49 24 6 177 1 HELLS Lymphoid-specific helicase Homo sapiens
O60264 0.000157 49 28 7 175 1 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 Homo sapiens
A7E436 0.000164 49 26 6 153 3 dbp8 ATP-dependent RNA helicase dbp8 Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)
Q3L8U1 0.000169 49 24 4 183 1 CHD9 Chromodomain-helicase-DNA-binding protein 9 Homo sapiens
Q9ZUL5 0.000212 48 28 7 200 1 ETL1 Protein CHROMATIN REMODELING 19 Arabidopsis thaliana
Q8BYH8 0.00022 49 24 4 183 1 Chd9 Chromodomain-helicase-DNA-binding protein 9 Mus musculus
Q8BJL0 0.00023 48 28 9 198 1 Smarcal1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 Mus musculus
Q58083 0.000234 48 29 2 106 1 MJ0669 Probable ATP-dependent RNA helicase MJ0669 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8GUG7 0.000273 48 26 2 119 2 RH50 DEAD-box ATP-dependent RNA helicase 50 Arabidopsis thaliana
O02494 0.000274 48 23 6 189 2 EIF4-A Eukaryotic initiation factor 4A Cryptosporidium parvum
O25029 0.000304 48 26 2 114 1 rhpA DEAD-box ATP-dependent RNA helicase RhpA Helicobacter pylori (strain ATCC 700392 / 26695)
O74842 0.000375 48 29 7 202 1 fft2 ATP-dependent helicase fft2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
B3NAN8 0.000397 48 30 2 119 3 okr DNA repair and recombination protein RAD54-like Drosophila erecta
O12944 0.000399 48 28 2 119 2 RAD54L DNA repair and recombination protein RAD54-like (Fragment) Gallus gallus
P34580 0.000409 47 24 2 110 3 T26G10.1 Putative ATP-dependent RNA helicase T26G10.1 Caenorhabditis elegans
Q91ZW3 0.00041 48 27 7 175 1 Smarca5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 Mus musculus
Q9LK10 0.000461 48 31 4 126 1 CLSY4 SNF2 domain-containing protein CLASSY 4 Arabidopsis thaliana
A6SFV4 0.000473 47 25 6 153 3 dbp8 ATP-dependent RNA helicase dbp8 Botryotinia fuckeliana (strain B05.10)
Q9LHE4 0.000533 47 27 0 120 1 CHR27 Helicase-like transcription factor CHR27 Arabidopsis thaliana
Q9C8J1 0.00062 47 27 4 133 2 RH34 DEAD-box ATP-dependent RNA helicase 34 Arabidopsis thaliana
F4K493 0.000643 47 30 3 113 1 CLSY2 SNF2 domain-containing protein CLASSY 2 Arabidopsis thaliana
B4F769 0.00065 47 25 7 207 2 Smarcal1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 Rattus norvegicus
B4KHL5 0.000715 47 26 5 161 3 okr DNA repair and recombination protein RAD54-like Drosophila mojavensis
P25439 0.000778 47 27 6 175 1 brm ATP-dependent helicase brm Drosophila melanogaster
Q94BR5 0.000811 47 29 0 85 1 CHR28 Helicase-like transcription factor CHR28 Arabidopsis thaliana
F4KBP5 0.000889 47 28 9 221 2 CHR4 Protein CHROMATIN REMODELING 4 Arabidopsis thaliana
Q9US25 0.001 47 26 9 204 1 hrp1 Chromodomain helicase hrp1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A5DQS0 0.001 47 29 2 115 3 DED1 ATP-dependent RNA helicase DED1 Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
Q9TTA5 0.001 47 25 8 199 2 SMARCAL1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 Bos taurus
A5E0U9 0.001 46 28 5 134 3 DBP8 ATP-dependent RNA helicase DBP8 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15685
Feature type CDS
Gene rapA
Product RNA polymerase-associated protein RapA
Location 134365 - 137271 (strand: -1)
Length 2907 (nucleotides) / 968 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_282
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF00176 SNF2-related domain
PF00271 Helicase conserved C-terminal domain
PF12137 RNA polymerase recycling family C-terminal
PF18337 RapA N-terminal Tudor like domain
PF18339 RapA N-terminal Tudor like domain 1

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0553 Transcription (K)
Replication, recombination and repair (L)		 KL Superfamily II DNA or RNA helicase, SNF2 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03580 ATP-dependent helicase HepA [EC:5.6.2.-] - -

Protein Sequence

MPFTLGQRWISDTESELGLGTLVSVEARMITLLFPATGENRLYASADAPITRVMFNEGDTVTSHEGWQLSVTAVEENDGLLTYIGQRTDTGEENVCLREVFLDSKLTFSKPQDRLFAGQIDRMDRFSLRYRARKFLSEEYRRATSGLRGIRASLIPHQLFIANEVGKRHAPRVLLADEVGLGKTIEAGMIIHQQLMAGRAERILVVVPESLQYQWLVEMLRRFNLRFSLFDDSRYTEALNQSDNPFDTEQLVLCSLDFVRKSKPRFEHLCDAGWDMLVVDEAHHLVWHEESPSREYQVIETLAEITPSVLLLTATPEQLGMESHFARLRLLDPNRFHDFPAFVAEQQKYQPVADAVSVLLERAPLTKDQQNAIHDLIAEQDIEPLLKAANTDSEDGDNARKELTRMLMDRHGTSRLLFRNTRNGVKGFPRRELHAIKMPLPAQYQTAIKVAGIMGSKKTTEVKAREMLYPEQIYQEFEGENATWWNFDPRVEWLLGFLLANRNEKVLVICAQAATALQLEQVLREREGIHAAVFHENLSLLERDRAAAWFASEENGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIQISIPYLEHTAQAVLLRWFHEGLDAFEYTCPTGRSIYDRYYDTLITMMANPTDLTGFDDFITECRKTHDVLKVQLEQGRDRLLEMHSNGGEAGNEIAAQIAAQDDDTELVTFALNLFDIVGINQDDRSDNMIALTPSDHMLVPDFPGLPEDGCTVTFKREQALSREDTQFISWEHPIIRNGLDLILSGDTGSCAVSVLKNKALPVGTLLTELIYVVEAQAPKNLQLTRFLPPTPVRLLMDAKGNNLAAQVEFESFNRQLNAVNRHTGSKFVNAVQSDVHQVLRQSEDVIAGQARECIDAAKVLADQHLTLEHNRLLALKSVNPNIRDDEVDAIEEERQQILSHLDEANWRLDAIRLIVVSHQ

Flanking regions ( +/- flanking 50bp)

TCACAGCATTTATCAAACTAGCCCTGAATAATAGAATCGAGCCCAAAAATATGCCGTTTACTCTTGGTCAACGCTGGATCAGCGATACTGAAAGCGAGCTGGGATTAGGTACTCTTGTATCTGTCGAAGCCCGGATGATTACCCTTCTTTTCCCCGCTACCGGCGAAAATCGCCTTTATGCTTCTGCCGATGCGCCTATCACCCGCGTGATGTTCAACGAAGGGGATACTGTCACCAGTCATGAAGGCTGGCAGCTCAGTGTGACCGCCGTTGAAGAGAACGACGGACTGTTAACCTATATTGGTCAGCGTACTGATACCGGCGAAGAAAATGTCTGTCTGCGCGAAGTCTTTCTCGACAGTAAACTGACATTCAGTAAGCCACAGGATCGCCTGTTTGCCGGTCAGATTGACCGGATGGATCGCTTTTCACTGCGCTACCGCGCACGTAAATTTCTGAGCGAAGAATACCGCCGCGCCACCAGCGGTCTGCGCGGAATACGCGCCAGTCTTATTCCGCATCAGCTGTTTATCGCCAACGAAGTGGGCAAGCGCCATGCGCCGCGTGTCCTGCTGGCAGATGAGGTAGGTCTGGGTAAAACCATCGAAGCCGGGATGATTATCCATCAGCAACTGATGGCAGGACGTGCTGAACGCATCCTCGTCGTCGTACCGGAAAGTCTTCAGTATCAGTGGCTGGTCGAAATGCTGCGCCGCTTTAATCTGCGCTTCTCGCTGTTTGATGACAGCCGCTACACCGAAGCGCTGAACCAGAGCGATAACCCGTTTGATACCGAACAACTGGTGCTCTGCTCACTGGATTTTGTCCGTAAAAGCAAACCGCGCTTTGAGCATTTATGTGACGCGGGCTGGGACATGCTGGTAGTGGATGAAGCTCATCACCTGGTCTGGCACGAAGAGTCGCCAAGCCGTGAGTATCAGGTTATTGAAACGCTGGCAGAAATTACGCCTTCAGTACTGCTGCTGACCGCCACCCCGGAACAACTCGGTATGGAGAGCCACTTTGCGCGCCTGCGCCTGCTGGATCCGAACCGTTTCCATGATTTCCCGGCCTTTGTTGCCGAACAGCAAAAATACCAGCCGGTCGCCGATGCGGTGTCGGTGCTGCTTGAGCGCGCCCCACTGACCAAAGATCAGCAAAATGCAATTCATGACCTTATCGCCGAACAGGATATTGAACCGCTGCTTAAAGCCGCGAATACCGACAGCGAAGATGGCGATAATGCCCGTAAGGAACTGACCCGGATGCTGATGGACAGACACGGCACCAGCCGTTTATTGTTCCGCAACACCCGCAACGGGGTGAAAGGCTTCCCGCGTCGTGAACTGCACGCCATTAAAATGCCGTTACCGGCACAATATCAGACGGCTATCAAAGTCGCCGGTATTATGGGCAGCAAAAAAACAACCGAAGTCAAAGCGCGCGAAATGCTCTATCCGGAGCAGATTTATCAGGAATTTGAAGGCGAGAACGCCACCTGGTGGAACTTTGATCCGCGCGTGGAATGGCTGCTCGGCTTCCTGCTGGCAAACCGCAATGAAAAAGTGCTGGTGATTTGCGCCCAGGCGGCGACTGCTCTGCAACTCGAACAGGTCTTACGTGAGCGCGAAGGTATTCACGCCGCTGTGTTCCATGAAAACCTGTCATTGCTGGAGCGTGACCGGGCAGCAGCCTGGTTTGCCTCCGAAGAAAATGGCGCGCAGGTGCTGCTCTGCTCTGAGATTGGCTCTGAAGGCCGCAATTTTCAGTTTGCCAACCAGTTAGTGATGTTTGACCTGCCGTTTAATCCTGATCTGCTGGAGCAGCGTATCGGGCGTCTCGACCGCATCGGACAGAAACGGGATATTCAGATAAGTATTCCGTATCTTGAACATACCGCGCAGGCCGTGCTGTTACGCTGGTTCCACGAGGGACTGGATGCATTCGAATACACCTGCCCGACCGGTCGTTCTATTTATGATCGCTATTACGATACGCTGATAACCATGATGGCGAACCCGACGGATCTTACCGGGTTTGATGATTTCATTACCGAATGCCGCAAAACCCATGATGTTCTGAAGGTGCAACTGGAACAGGGTCGTGACCGCCTGCTGGAAATGCACTCCAACGGCGGCGAAGCCGGAAATGAAATTGCCGCACAAATAGCCGCGCAGGATGATGATACTGAACTGGTTACCTTTGCGCTGAATCTGTTTGATATCGTCGGTATCAATCAGGATGACCGCAGCGATAATATGATTGCCCTGACGCCGTCCGATCACATGCTGGTGCCGGATTTCCCGGGTCTGCCGGAAGATGGCTGTACGGTAACCTTCAAACGTGAGCAGGCGCTTTCCCGCGAAGATACCCAGTTTATCAGTTGGGAACACCCGATTATCCGCAACGGGCTGGATCTTATTCTGTCCGGCGATACCGGCAGCTGTGCGGTTTCAGTACTGAAAAATAAAGCCCTGCCGGTCGGCACGCTGCTGACTGAACTTATCTATGTGGTGGAAGCTCAGGCACCGAAAAATCTCCAGCTCACCCGTTTCCTGCCACCAACGCCGGTTCGCCTGCTGATGGATGCTAAAGGTAACAATCTTGCCGCTCAGGTGGAGTTTGAAAGCTTTAACCGTCAGCTGAATGCAGTGAACCGCCATACCGGCAGCAAATTTGTCAATGCCGTGCAAAGTGATGTTCATCAGGTTCTGCGTCAGTCAGAAGACGTGATTGCCGGTCAGGCACGCGAATGCATTGATGCCGCAAAAGTACTGGCTGATCAGCATCTGACACTGGAGCATAACCGTCTGCTGGCACTGAAATCCGTGAACCCGAACATTCGTGATGATGAAGTTGATGCGATTGAAGAAGAGCGTCAGCAGATCCTGTCACACCTGGATGAAGCTAACTGGCGTCTCGATGCTATCCGCCTGATCGTGGTTTCACATCAATAACCCGCAGCCCGGCAGAAACAGACTGCCGGGCGCCTCTCATCTGGTGACCC