Homologs in group_51

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09045 FBDBKF_09045 24.9 Morganella morganii S1 - Fimbria A protein
EHELCC_10365 EHELCC_10365 24.9 Morganella morganii S2 - Fimbria A protein
NLDBIP_10710 NLDBIP_10710 24.9 Morganella morganii S4 - Fimbria A protein
LHKJJB_10645 LHKJJB_10645 24.9 Morganella morganii S3 - Fimbria A protein
HKOGLL_13705 HKOGLL_13705 24.9 Morganella morganii S5 - Fimbria A protein
F4V73_RS10925 F4V73_RS10925 25.4 Morganella psychrotolerans - fimbrial protein
PMI_RS01230 PMI_RS01230 25.4 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01275 PMI_RS01275 23.7 Proteus mirabilis HI4320 mrpA MR/P fimbria major subunit MrpA
PMI_RS01430 PMI_RS01430 20.5 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01435 PMI_RS01435 20.8 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01455 PMI_RS01455 20.6 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09265 PMI_RS09265 18.6 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10955 PMI_RS10955 23.7 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_51

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_51

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42185 1.87e-26 102 29 5 191 3 prsH PRS fimbrial minor pilin protein Escherichia coli
P07111 3.67e-26 102 29 5 191 1 papH PAP fimbrial minor pilin protein Escherichia coli
P43660 1.52e-07 52 28 5 194 3 lpfA Long polar fimbria protein A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8X582 9.47e-06 47 26 7 193 1 elfA Laminin-binding fimbrial subunit ElfA Escherichia coli O157:H7
P75855 1.03e-05 47 26 7 193 1 elfA Fimbrial subunit ElfA Escherichia coli (strain K12)
P12730 7.76e-05 45 25 5 164 1 sfaA S-fimbrial protein subunit SfaA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q8X5K5 8.73e-05 44 26 4 166 2 lpfA Probable major fimbrial subunit LpfA Escherichia coli O157:H7
P39834 0.000224 43 25 6 164 3 ygiL Uncharacterized fimbrial-like protein YgiL Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10950
Feature type CDS
Gene -
Product fimbrial protein
Location 2411363 - 2411929 (strand: -1)
Length 567 (nucleotides) / 188 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_51
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MFKKIIILLFFTKIFSTYASGAVLDKYIPSDKVWWQGTAKFLGKVISPACTLDMDSKYQLVDLGTIPVNKMNNNDDLLASKKIKIKLSDCQFINKTKNIDKVKGVTLTFYSDVSGSKADLFSFNNSDEVYFKIIDEYGYSANSGESLPLIYVDGDNTYLYYKIDVVKKLDVITPGDYYASVLFKINYE

Flanking regions ( +/- flanking 50bp)

AATTTAACGAGAGCAGTTAATCTGCTCTCGATTATTTAAGGCCAAAATCTATGTTTAAAAAAATCATAATATTATTATTTTTCACTAAAATCTTTTCAACATATGCAAGCGGAGCTGTATTGGATAAATATATCCCATCAGATAAAGTTTGGTGGCAAGGAACAGCAAAGTTTTTAGGAAAAGTAATTTCGCCTGCTTGCACATTAGATATGGATAGTAAATATCAATTGGTTGATCTAGGTACTATACCTGTTAATAAAATGAACAATAATGATGATTTATTAGCGAGTAAAAAAATAAAAATAAAATTATCTGATTGCCAATTTATTAATAAGACTAAAAATATCGATAAAGTGAAAGGCGTTACGTTAACATTTTATTCAGATGTTAGTGGATCTAAAGCTGATTTATTTTCATTTAATAACAGTGATGAAGTCTATTTTAAAATAATAGATGAATATGGATATAGCGCTAATTCTGGAGAGTCATTACCATTAATATATGTTGATGGGGATAATACATATCTATATTACAAAATAGACGTTGTAAAAAAGTTGGATGTAATTACTCCTGGTGATTATTATGCAAGCGTTTTATTCAAAATAAATTATGAATGATTAGCTGCTTTCAACTTCTCATTAAAACTTTAAGACTTAAATAATTAAGG