Homologs in group_432

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00375 FBDBKF_00375 41.7 Morganella morganii S1 rcsD phosphotransferase RcsD
EHELCC_01170 EHELCC_01170 41.7 Morganella morganii S2 rcsD phosphotransferase RcsD
NLDBIP_02290 NLDBIP_02290 41.7 Morganella morganii S4 rcsD phosphotransferase RcsD
LHKJJB_03805 LHKJJB_03805 41.7 Morganella morganii S3 rcsD phosphotransferase RcsD
HKOGLL_03240 HKOGLL_03240 41.7 Morganella morganii S5 rcsD phosphotransferase RcsD
F4V73_RS06355 F4V73_RS06355 42.7 Morganella psychrotolerans rcsD phosphotransferase RcsD

Distribution of the homologs in the orthogroup group_432

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_432

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39838 2.17e-139 440 30 12 905 1 rcsD Phosphotransferase RcsD Escherichia coli (strain K12)
Q9KLK7 2.57e-24 113 28 1 245 1 luxQ Autoinducer 2 sensor kinase/phosphatase LuxQ Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0DMC6 1.14e-20 101 21 14 516 1 rcsC Sensor histidine kinase RcsC Escherichia coli
P0DMC5 6.45e-20 99 20 13 515 1 rcsC Sensor histidine kinase RcsC Escherichia coli (strain K12)
P58662 1.59e-19 98 22 11 455 3 rcsC Sensor histidine kinase RcsC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q56128 3.23e-19 97 22 11 455 3 rcsC Sensor histidine kinase RcsC Salmonella typhi
P54302 5.66e-18 92 24 5 308 1 luxQ Autoinducer 2 sensor kinase/phosphatase LuxQ Vibrio harveyi
Q87GU5 1.39e-16 88 23 5 308 3 luxQ Autoinducer 2 sensor kinase/phosphatase LuxQ Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q8D5Z6 3.92e-14 80 23 5 314 3 luxQ Autoinducer 2 sensor kinase/phosphatase LuxQ Vibrio vulnificus (strain CMCP6)
Q7MD16 1.17e-13 79 23 5 314 3 luxQ Autoinducer 2 sensor kinase/phosphatase LuxQ Vibrio vulnificus (strain YJ016)
Q3S4A7 1.32e-11 72 23 6 275 1 AHK5 Histidine kinase 5 Arabidopsis thaliana
P30855 3.72e-11 71 23 5 250 1 evgS Sensor protein EvgS Escherichia coli (strain K12)
P58402 1.89e-10 68 22 5 244 3 evgS Sensor protein EvgS Escherichia coli O157:H7
Q54YH4 6.35e-10 67 22 5 291 1 dhkB Hybrid signal transduction histidine kinase B Dictyostelium discoideum
O82436 1.1e-09 65 23 6 252 2 ETR1 Ethylene receptor 1 Cucumis melo var. cantalupensis
Q9SSY6 1.46e-09 65 22 4 250 2 ETR1 Ethylene receptor 1 Cucumis sativus
Q5AHA0 1.71e-09 65 21 3 238 2 CHK1 Histidine protein kinase 1 Candida albicans (strain SC5314 / ATCC MYA-2876)
Q54RP6 3.62e-09 64 24 10 293 3 dhkL Hybrid signal transduction histidine kinase L Dictyostelium discoideum
P49333 2.76e-08 61 22 6 244 1 ETR1 Ethylene receptor 1 Arabidopsis thaliana
P58356 4.36e-08 60 24 10 294 3 torS Sensor protein TorS Escherichia coli O157:H7
Q869S5 5.52e-08 60 23 4 221 1 dokA Hybrid signal transduction protein dokA Dictyostelium discoideum
Q95PI2 6.91e-08 60 21 6 273 1 dhkC Hybrid signal transduction histidine kinase C Dictyostelium discoideum
Q5A599 2.22e-07 58 26 5 239 1 NIK1 Histidine protein kinase NIK1 Candida albicans (strain SC5314 / ATCC MYA-2876)
Q9P7Q7 3.15e-07 58 23 6 265 3 mak1 Peroxide stress-activated histidine kinase mak1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P39453 4.77e-07 57 24 10 294 1 torS Sensor protein TorS Escherichia coli (strain K12)
Q53RH0 6.05e-07 57 21 2 245 2 ERS1 Probable ethylene response sensor 1 Oryza sativa subsp. japonica
A2XL32 6.05e-07 57 21 2 245 2 ERS1 Probable ethylene response sensor 1 Oryza sativa subsp. indica
P16575 6.8e-07 57 20 3 242 1 bvgS Virulence sensor protein BvgS Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
O49230 8.92e-07 56 21 7 250 2 ETR1 Ethylene receptor 1 Brassica oleracea
Q54Q69 1.32e-06 56 22 9 315 3 dhkG Hybrid signal transduction histidine kinase G Dictyostelium discoideum
Q54YZ9 3.46e-06 55 23 8 314 3 dhkJ Hybrid signal transduction histidine kinase J Dictyostelium discoideum
Q52969 4.24e-06 54 23 7 241 3 R01002 Uncharacterized sensor-like histidine kinase R01002 Rhizobium meliloti (strain 1021)
Q41342 5.1e-06 54 22 7 253 1 ETR1 Ethylene receptor 1 Solanum lycopersicum
P0AEC4 6.72e-06 53 22 16 367 3 arcB Aerobic respiration control sensor protein ArcB Shigella flexneri
P0AEC3 6.72e-06 53 22 16 367 1 arcB Aerobic respiration control sensor protein ArcB Escherichia coli (strain K12)
P23545 7.66e-06 53 21 11 369 1 phoR Alkaline phosphatase synthesis sensor protein PhoR Bacillus subtilis (strain 168)
P58363 9.62e-06 53 22 16 367 3 arcB Aerobic respiration control sensor protein ArcB Escherichia coli O157:H7
P26762 9.86e-06 53 19 3 242 3 bvgS Virulence sensor protein BvgS Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P37894 1.14e-05 53 22 8 315 1 pleC Non-motile and phage-resistance protein Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P48027 1.22e-05 53 25 8 302 3 gacS Sensor protein GacS Pseudomonas syringae pv. syringae
O81122 1.45e-05 52 21 5 251 2 ETR1 Ethylene receptor Malus domestica
P40330 1.73e-05 52 19 3 242 3 bvgS Virulence sensor protein BvgS Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
P94414 2.67e-05 51 22 4 245 3 yclK Sensor histidine kinase YclK Bacillus subtilis (strain 168)
Q03228 5.14e-05 50 22 8 247 1 divJ Histidine protein kinase DivJ Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
O14002 7.23e-05 50 23 8 259 3 mak2 Peroxide stress-activated histidine kinase mak2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9M7M1 8.75e-05 50 19 4 247 2 ETR1 Ethylene receptor Prunus persica
Q06067 0.000103 49 22 11 271 1 atoS Signal transduction histidine-protein kinase AtoS Escherichia coli (strain K12)
P94608 0.000106 50 20 7 273 3 kdpD Sensor protein KdpD Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q0DKM0 0.000111 49 20 5 250 2 ERS2 Probable ethylene response sensor 2 Oryza sativa subsp. japonica
B8AY75 0.000119 49 20 5 250 2 ERS2 Probable ethylene response sensor 2 Oryza sativa subsp. indica
T2KMF4 0.000169 49 23 8 265 3 BN863_21930 Histidine kinase P4 Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1)
Q9F8D7 0.000205 48 26 9 293 3 gacS Sensor histidine kinase GacS Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)
Q8ZPP5 0.000253 48 24 2 173 1 ssrA Sensor histidine kinase SsrA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P42245 0.000288 47 22 4 244 3 ycbM Sensor histidine kinase YcbM Bacillus subtilis (strain 168)
P39928 0.000666 47 29 2 84 1 SLN1 Osmosensing histidine protein kinase SLN1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08485
Feature type CDS
Gene rcsD
Product phosphotransferase RcsD
Location 1845004 - 1847697 (strand: 1)
Length 2694 (nucleotides) / 897 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_432
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01627 Hpt domain
PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF16359 RcsD-ABL domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2205 Signal transduction mechanisms (T) T K+-sensing histidine kinase KdpD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07676 two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] Two-component system
Biofilm formation - Escherichia coli		 -

Protein Sequence

MRTLTQLKPNTLTRLYALFLLFMAISLFLYAYSYFDTWLESKKNAINNTTNKFASQVEDYRYHANQLFQLSNKINDPTLFLPLKINPVKLRSDVYWLEGRDQTVDAIVFGKSNEQTFQLAGYFANALEIIWGVRNNYSSLYYLNGKGNDLILITTHSILKPELRYKESYLTLTAENKRSELLMQSTALDEKESLSPIRKMPTENIYYYTYRTMFNVPGQLTSVIAFDLPINNFLPAELSPQYLRLLPTGQQSVYDKNNIEVSTDGTSLIFSQPIAGIPYSLSYEYPLKSIFNEIVYKNIWLLISLLIFISISVFGHIYIRNKYVFPYISMTRNLRIKEEMTNDIISNLPIGLLVYNFSSNHKIISNSHAEKLLPHIDLSKIRQMAIEHNGLIQTAIDNEIYEIRTSSNSNIDNTALFIFLNKDNEALINKKLQLAQQEYEKNTIARRKILSNMSLELIRPIKDINEMVYQFKDLLPNDTHQQLLSLLLEKTNYISEWIENITLINKLENQEWKIHQDEFELSTLVESILITASPFMIRKGLTLYFHNNIKPSLLLFNDGPALSKIILSLINYAISTTNYGKITVNLNLEKNNDKEEIVIDIIDSGSGLTAQDLANIKYPFLGQAMGDKYYSNSGIIFYLCHLLCNKIQGTLTITSQESIGSHFRIVLPYQHIDTEERSFDILLEGITAKLAIKNPEIEKIICQQLDKYGATYFDKNKENLYSEYDIILRDTPDNNPESATVLLVSSITGFEKIARNLIKCNYNFGDPLIEAITYLIEENEQLSLETTQTSIRNENNNLDHHEVILNNYRKKLNDSDYKELFINTVPIDVEKLHLEATNKDFHSLAQTAHRLKGVFAMLDLEYLRENCEYLEDDIKNHNELEIKERINQLDKWIRQLL

Flanking regions ( +/- flanking 50bp)

CCAATTTTTTCTTTTTTATTGACTTCATTTCTTAAAGGCTCGCAAACTGAATGCGTACACTGACCCAATTAAAGCCAAATACATTAACTCGCTTATATGCTCTGTTTCTTCTGTTTATGGCCATATCCCTTTTTCTATATGCTTATAGCTATTTTGATACTTGGCTAGAAAGTAAAAAAAATGCCATTAATAACACGACTAATAAGTTTGCTTCTCAAGTTGAAGATTACCGCTATCACGCTAACCAACTATTCCAGTTATCAAACAAAATTAATGATCCAACCCTCTTTCTGCCTTTAAAAATCAATCCGGTCAAACTACGCTCTGATGTTTATTGGCTTGAAGGACGCGATCAGACCGTTGACGCTATTGTTTTTGGTAAATCGAATGAACAAACCTTTCAGTTAGCCGGTTATTTTGCAAACGCGTTAGAAATTATTTGGGGGGTACGTAATAACTATAGCTCTCTCTATTATCTTAATGGTAAAGGCAATGATCTTATCCTTATTACTACCCACTCAATACTAAAACCAGAATTGCGCTATAAAGAAAGCTATTTAACACTAACGGCTGAAAACAAACGTTCTGAGCTATTAATGCAATCAACGGCATTAGATGAAAAAGAGAGCCTTTCTCCCATTAGGAAAATGCCGACAGAAAATATTTATTACTATACCTACCGCACCATGTTTAATGTGCCAGGGCAACTGACCAGTGTTATTGCCTTTGATTTACCCATAAATAATTTTCTACCTGCTGAGCTATCACCTCAATATTTAAGATTATTACCCACAGGACAGCAGAGTGTTTATGATAAAAACAATATTGAGGTATCAACGGATGGGACTTCACTCATCTTCTCACAGCCCATCGCAGGAATACCCTACTCTTTATCTTATGAGTATCCACTAAAATCGATTTTCAATGAGATTGTGTATAAAAATATCTGGTTACTTATCAGCCTACTCATTTTTATCTCGATTTCAGTGTTTGGCCATATCTATATTCGTAATAAATATGTATTCCCTTATATTTCGATGACGCGTAATCTTCGCATCAAAGAAGAGATGACTAACGATATCATTTCTAATCTTCCTATTGGTCTATTGGTGTATAATTTTTCATCTAACCATAAGATTATTAGTAATAGCCACGCAGAGAAACTATTACCTCATATCGATTTATCTAAGATCCGCCAGATGGCGATTGAACATAATGGTTTAATCCAAACGGCCATTGATAACGAAATTTATGAGATCCGCACCAGTAGCAACAGCAATATCGATAATACTGCTCTATTCATTTTTCTGAATAAAGACAACGAAGCATTAATCAATAAGAAATTGCAGCTAGCACAACAAGAATATGAAAAAAACACGATTGCACGCCGCAAGATCTTATCCAATATGTCATTGGAACTCATACGACCAATTAAAGATATTAATGAGATGGTATATCAATTTAAAGATCTACTTCCTAACGATACTCACCAACAATTACTGAGTCTGCTATTAGAAAAAACGAATTATATTTCTGAGTGGATAGAAAACATTACGCTAATTAATAAGTTAGAAAATCAAGAATGGAAAATACATCAAGATGAATTTGAACTTTCAACGCTAGTTGAATCTATTCTAATAACCGCATCACCATTTATGATAAGAAAGGGATTAACACTTTATTTCCATAATAATATTAAACCTAGTTTACTTTTATTTAATGATGGCCCAGCATTAAGTAAGATTATTTTATCATTGATTAATTATGCCATTAGTACGACTAATTATGGAAAAATAACCGTCAATCTAAATTTAGAAAAAAATAATGATAAAGAAGAAATAGTAATTGATATTATTGATAGTGGCAGTGGGTTAACAGCTCAAGATCTGGCTAATATTAAATATCCATTTTTAGGTCAAGCTATGGGTGATAAATATTATTCCAACTCGGGTATTATTTTTTATTTATGTCATTTGTTGTGTAACAAAATACAAGGCACTTTGACCATTACAAGCCAAGAAAGTATTGGCTCTCATTTCCGTATCGTACTTCCATACCAGCATATAGATACAGAAGAGCGCTCTTTTGACATATTATTAGAGGGTATAACTGCAAAACTCGCCATAAAAAACCCTGAAATAGAAAAAATAATCTGCCAACAGCTTGATAAATATGGCGCTACATACTTTGATAAAAATAAAGAGAATCTTTACTCAGAATACGATATCATACTTAGAGACACTCCGGATAATAATCCTGAATCAGCAACAGTATTATTAGTTAGCTCTATTACCGGATTTGAAAAAATAGCAAGAAATTTAATAAAGTGTAACTATAACTTCGGTGATCCATTAATTGAGGCTATTACTTATTTGATTGAAGAAAATGAACAACTTTCTCTCGAAACAACTCAAACGAGTATTCGTAATGAGAATAATAACCTTGATCATCACGAAGTAATTCTTAATAATTATAGGAAGAAGTTGAATGATAGTGATTATAAGGAACTATTTATCAATACTGTTCCCATTGATGTTGAAAAACTACACTTAGAAGCAACTAATAAAGACTTTCATTCTCTAGCTCAGACAGCTCATCGTCTGAAAGGGGTTTTTGCTATGTTAGATTTAGAATATCTCAGAGAGAACTGCGAATATTTAGAAGATGACATAAAAAATCATAATGAATTAGAGATAAAAGAACGTATCAATCAACTGGATAAATGGATCCGACAGTTGCTGTAGCAAGGTAACAATTAAACATGAATAACCTTAATATTATTATTGCCGATGAT