Orthogroup:group_432


Homologs in group_432

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00375 FBDBKF_00375 Morganella morganii S1 rcsD phosphotransferase RcsD
EHELCC_01170 EHELCC_01170 Morganella morganii S2 rcsD phosphotransferase RcsD
NLDBIP_02290 NLDBIP_02290 Morganella morganii S4 rcsD phosphotransferase RcsD
LHKJJB_03805 LHKJJB_03805 Morganella morganii S3 rcsD phosphotransferase RcsD
HKOGLL_03240 HKOGLL_03240 Morganella morganii S5 rcsD phosphotransferase RcsD
F4V73_RS06355 F4V73_RS06355 Morganella psychrotolerans rcsD phosphotransferase RcsD
PMI_RS08485 PMI_RS08485 Proteus mirabilis HI4320 rcsD phosphotransferase RcsD

Distribution of group_432 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_432 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_432

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_432.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rcsD 7

Product

# Product Occurence
1 phosphotransferase RcsD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0642 5 T Signal transduction mechanisms (T) Signal transduction histidine kinase
COG2205 2 T Signal transduction mechanisms (T) K+-sensing histidine kinase KdpD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07676 7 two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] Two-component system
Biofilm formation - Escherichia coli		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01627 7 Hpt domain
PF02518 7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF16359 7 RcsD-ABL domain

Annotations of the 64 SwissProt hits

Annotation Number of occurrences
Aerobic respiration control sensor protein ArcB 3
Alkaline phosphatase synthesis sensor protein PhoR 1
Autoinducer 2 sensor kinase/phosphatase LuxQ 5
Ethylene receptor 2
Ethylene receptor 1 5
Heme sensor protein HssS 1
Histidine kinase 5 1
Histidine kinase P4 1
Histidine protein kinase 1 1
Histidine protein kinase DivJ 1
Histidine protein kinase NIK1 1
Hybrid signal transduction histidine kinase B 1
Hybrid signal transduction histidine kinase C 1
Hybrid signal transduction histidine kinase G 1
Hybrid signal transduction histidine kinase J 1
Hybrid signal transduction histidine kinase K 1
Hybrid signal transduction histidine kinase L 1
Hybrid signal transduction protein dokA 1
Non-motile and phage-resistance protein 1
Osmosensing histidine protein kinase SLN1 1
Peroxide stress-activated histidine kinase mak1 1
Peroxide stress-activated histidine kinase mak2 1
Phosphotransferase RcsD 1
Probable ethylene response sensor 1 2
Probable ethylene response sensor 2 2
Sensor histidine kinase GacS 1
Sensor histidine kinase RcsC 4
Sensor histidine kinase ResE 1
Sensor histidine kinase SsrA 1
Sensor histidine kinase YcbM 1
Sensor histidine kinase YclK 1
Sensor protein EvgS 2
Sensor protein GacS 1
Sensor protein KdpD 1
Sensor protein SrrB 2
Sensor protein TorS 2
Signal transduction histidine-protein kinase AtoS 1
Signal transduction histidine-protein kinase BarA 4
Uncharacterized sensor-like histidine kinase R01002 1
Virulence sensor protein BvgS 3

Protein length

Min length 897
Max length 904
Mean length (sd) 903.0 (2.6)
Median length 904.0

Protein length distribution