Homologs in group_1948

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14620 FBDBKF_14620 69.2 Morganella morganii S1 lolE lipoprotein-releasing ABC transporter permease subunit LolE
EHELCC_15425 EHELCC_15425 69.2 Morganella morganii S2 lolE lipoprotein-releasing ABC transporter permease subunit LolE
NLDBIP_15955 NLDBIP_15955 69.2 Morganella morganii S4 lolE lipoprotein-releasing ABC transporter permease subunit LolE
LHKJJB_15885 LHKJJB_15885 69.2 Morganella morganii S3 lolE lipoprotein-releasing ABC transporter permease subunit LolE
HKOGLL_15005 HKOGLL_15005 69.2 Morganella morganii S5 lolE lipoprotein-releasing ABC transporter permease subunit LolE
F4V73_RS07415 F4V73_RS07415 68.9 Morganella psychrotolerans lolE lipoprotein-releasing ABC transporter permease subunit LolE

Distribution of the homologs in the orthogroup group_1948

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1948

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75958 0.0 551 65 0 412 1 lolE Lipoprotein-releasing system transmembrane protein LolE Escherichia coli (strain K12)
P44250 8.48e-138 403 48 4 408 3 lolE Lipoprotein-releasing system transmembrane protein LolE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57061 1.18e-75 244 32 4 407 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P57062 1.28e-75 244 33 5 407 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9PEF2 1.57e-70 231 32 3 409 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain 9a5c)
Q87EF5 6.94e-70 229 32 3 409 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q8K9N7 1.55e-65 218 28 4 417 3 BUsg_286 Uncharacterized membrane protein BUsg_286 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P44252 4.18e-40 150 30 9 413 3 lolC Lipoprotein-releasing system transmembrane protein LolC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0ADC3 2.94e-35 137 27 9 414 1 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli (strain K12)
P0ADC4 2.94e-35 137 27 9 414 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADC5 2.94e-35 137 27 9 414 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O157:H7
Q8K9N8 9.17e-25 108 26 12 374 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57382 1.37e-17 87 24 13 433 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q58902 3.16e-07 55 21 18 428 3 MJ1507 Uncharacterized ABC transporter permease MJ1507 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O35005 1.6e-06 53 30 5 140 2 ytrF ABC transporter permease YtrF Bacillus subtilis (strain 168)
Q88F88 2.22e-06 53 27 4 148 1 pvdT Pyoverdine export ATP-binding/permease protein PvdT Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q668L6 3.06e-05 50 25 10 254 3 macB2 Macrolide export ATP-binding/permease protein MacB 2 Yersinia pseudotuberculosis serotype I (strain IP32953)
Q4ZV10 3.08e-05 50 27 4 148 3 pvdT Pyoverdine export ATP-binding/permease protein PvdT Pseudomonas syringae pv. syringae (strain B728a)
Q7CJG3 3.48e-05 49 25 10 254 3 macB2 Macrolide export ATP-binding/permease protein MacB 2 Yersinia pestis
Q1C5W7 3.48e-05 49 25 10 254 3 macB2 Macrolide export ATP-binding/permease protein MacB 2 Yersinia pestis bv. Antiqua (strain Antiqua)
Q1CJW8 3.48e-05 49 25 10 254 3 macB1 Macrolide export ATP-binding/permease protein MacB 1 Yersinia pestis bv. Antiqua (strain Nepal516)
Q1I7I9 4.06e-05 49 27 4 148 3 pvdT Pyoverdine export ATP-binding/permease protein PvdT Pseudomonas entomophila (strain L48)
Q65TH4 5.47e-05 49 25 5 147 3 macB Macrolide export ATP-binding/permease protein MacB Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q2T4B3 8.14e-05 48 26 3 138 3 macB Macrolide export ATP-binding/permease protein MacB Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
Q9I190 8.48e-05 48 26 8 221 1 pvdT Pyoverdine export ATP-binding/permease protein PvdT Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q02MI4 8.48e-05 48 26 8 221 3 pvdT Pyoverdine export ATP-binding/permease protein PvdT Pseudomonas aeruginosa (strain UCBPP-PA14)
Q48KB2 9.46e-05 48 27 4 148 3 pvdT Pyoverdine export ATP-binding/permease protein PvdT Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
Q3KF57 0.000134 47 22 5 221 3 pvdT Pyoverdine export ATP-binding/permease protein PvdT Pseudomonas fluorescens (strain Pf0-1)
Q63MM6 0.000141 47 25 3 138 3 macB Macrolide export ATP-binding/permease protein MacB Burkholderia pseudomallei (strain K96243)
Q3JGG7 0.000141 47 25 3 138 3 macB Macrolide export ATP-binding/permease protein MacB Burkholderia pseudomallei (strain 1710b)
Q82VK1 0.000153 47 28 3 142 3 macB Macrolide export ATP-binding/permease protein MacB Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
Q7N6F9 0.000202 47 27 6 143 3 macB Macrolide export ATP-binding/permease protein MacB Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q2EHL8 0.000491 46 25 5 141 1 macB Macrolide export ATP-binding/permease protein MacB Aggregatibacter actinomycetemcomitans
Q4FU75 0.000843 45 23 4 134 3 macB Macrolide export ATP-binding/permease protein MacB Psychrobacter arcticus (strain DSM 17307 / VKM B-2377 / 273-4)
Q6D8T5 0.000844 45 23 2 138 3 macB Macrolide export ATP-binding/permease protein MacB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04320
Feature type CDS
Gene lolE
Product lipoprotein-releasing ABC transporter permease subunit LolE
Location 970800 - 972047 (strand: 1)
Length 1248 (nucleotides) / 415 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1948
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02687 FtsX-like permease family
PF12704 MacB-like periplasmic core domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4591 Cell wall/membrane/envelope biogenesis (M) M ABC-type transport system involved in lipoprotein release, permease component LolC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09808 lipoprotein-releasing system permease protein ABC transporters -

Protein Sequence

MAQLPLALVTALRFSKGRKRAGMVSLISIISTLGIMLGVAVLIIGLSAMNGFERELKNRILSVVPHGQIYSVEQPFISWQPALSRIENTEGVVAAAPYILLTGLLEKGTELKAVQVMGVEPNKQSDISLLPSYVQNNAWQHFQAGQQQIIIGQGVADALKIKQGDWLTILIPNNDDPKKLLQPKRIRLQVSGIFKLSGMLDHQLALIPLADAQQYLDYGKGITGIEVKTSDPFLANEIIHNAGLNSQAYVYAKSWISDYGYMYSDIQMIRSIMYLSMILVIGVACFNIVSTLIMAVRDKSGDIAILRTLGARDSHIRNIFLWYGLLSGMIGCVAGVIMGVVVSLNLTPIVSVIESMTGHSVLSGDVYFVDFLPSEIHAIDVFSVFLTTVILSLIASWYPARRATKLDPARILSGQ

Flanking regions ( +/- flanking 50bp)

ATGAAAGATGGTCAATTAGAGTCTCAAGAAGCGATTTCAGGAGTGGAATAATGGCGCAGTTGCCACTTGCTTTAGTTACCGCATTACGTTTTTCAAAAGGACGAAAACGTGCTGGTATGGTGTCATTAATTTCGATTATCTCAACGCTGGGCATTATGTTGGGTGTAGCGGTATTGATTATCGGATTAAGTGCCATGAACGGTTTTGAACGTGAATTAAAAAACCGCATTCTTTCTGTGGTTCCCCATGGACAAATTTATTCGGTAGAACAACCCTTTATATCTTGGCAACCGGCACTATCGCGGATTGAAAATACTGAGGGTGTTGTTGCTGCTGCCCCCTATATTTTATTAACCGGATTACTTGAAAAAGGAACCGAATTAAAAGCGGTACAAGTGATGGGGGTTGAACCGAATAAACAAAGTGATATCAGTTTATTACCGAGCTATGTGCAAAATAATGCATGGCAACATTTTCAAGCGGGTCAACAGCAAATCATTATTGGCCAAGGTGTTGCCGATGCCTTAAAAATCAAACAAGGTGATTGGTTAACTATTCTGATCCCTAACAATGATGATCCGAAAAAGCTATTACAACCTAAACGCATTCGTTTACAAGTCAGTGGTATATTTAAACTCAGTGGTATGCTCGATCACCAATTAGCGTTAATTCCATTGGCAGATGCGCAACAGTATCTTGATTACGGCAAAGGAATTACGGGTATTGAAGTGAAAACAAGCGATCCATTTCTAGCTAATGAAATTATTCATAATGCAGGCTTAAATAGCCAAGCCTATGTTTATGCTAAAAGCTGGATCAGCGATTATGGTTATATGTATAGCGATATTCAGATGATCCGCAGCATTATGTATCTCTCAATGATTTTAGTGATTGGGGTTGCTTGTTTTAATATTGTCTCGACGCTGATTATGGCGGTAAGAGATAAGAGCGGAGATATTGCTATTTTACGAACGTTAGGTGCAAGGGATAGCCATATTCGCAATATTTTCTTATGGTACGGACTGTTGTCAGGCATGATCGGATGCGTGGCCGGTGTTATTATGGGGGTAGTTGTCTCACTAAATTTAACCCCTATTGTCTCGGTAATTGAATCCATGACAGGGCATAGTGTGTTATCAGGAGATGTCTATTTTGTCGATTTCTTACCTTCAGAAATACATGCAATTGATGTTTTCTCCGTATTTTTGACGACGGTTATTTTGAGTTTGATTGCCAGTTGGTATCCTGCTCGTCGAGCAACTAAACTCGATCCTGCTAGAATTTTAAGTGGACAGTAAGTTTATTGACATAAAATGGATATAAACGGAAATAAGACAGTAAAGTTATC