Homologs in group_1948

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14620 FBDBKF_14620 100.0 Morganella morganii S1 lolE lipoprotein-releasing ABC transporter permease subunit LolE
EHELCC_15425 EHELCC_15425 100.0 Morganella morganii S2 lolE lipoprotein-releasing ABC transporter permease subunit LolE
LHKJJB_15885 LHKJJB_15885 100.0 Morganella morganii S3 lolE lipoprotein-releasing ABC transporter permease subunit LolE
HKOGLL_15005 HKOGLL_15005 100.0 Morganella morganii S5 lolE lipoprotein-releasing ABC transporter permease subunit LolE
F4V73_RS07415 F4V73_RS07415 89.6 Morganella psychrotolerans lolE lipoprotein-releasing ABC transporter permease subunit LolE
PMI_RS04320 PMI_RS04320 69.2 Proteus mirabilis HI4320 lolE lipoprotein-releasing ABC transporter permease subunit LolE

Distribution of the homologs in the orthogroup group_1948

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1948

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75958 0.0 527 62 0 413 1 lolE Lipoprotein-releasing system transmembrane protein LolE Escherichia coli (strain K12)
P44250 7.13e-141 411 49 3 408 3 lolE Lipoprotein-releasing system transmembrane protein LolE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57061 1.26e-69 228 31 3 404 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P57062 2.18e-69 228 31 3 404 3 lolC Lipoprotein-releasing system transmembrane protein LolC Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9PEF2 2.62e-68 225 32 3 409 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain 9a5c)
Q87EF5 2.7e-67 222 32 3 409 3 lolC Lipoprotein-releasing system transmembrane protein LolC Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q8K9N7 1.15e-60 205 26 4 416 3 BUsg_286 Uncharacterized membrane protein BUsg_286 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P44252 3.21e-37 142 30 11 420 3 lolC Lipoprotein-releasing system transmembrane protein LolC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0ADC3 6.91e-37 142 28 9 413 1 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli (strain K12)
P0ADC4 6.91e-37 142 28 9 413 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADC5 6.91e-37 142 28 9 413 3 lolC Lipoprotein-releasing system transmembrane protein LolC Escherichia coli O157:H7
P57382 5.36e-23 103 25 10 420 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9N8 1.1e-21 99 24 12 374 3 lolC Lipoprotein-releasing system transmembrane protein LolC Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q58902 1.43e-06 53 25 2 156 3 MJ1507 Uncharacterized ABC transporter permease MJ1507 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58207 0.000118 47 25 3 136 3 MJ0797 Uncharacterized ABC transporter permease MJ0797 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8XED0 0.000353 46 27 3 148 3 macB Macrolide export ATP-binding/permease protein MacB Escherichia coli O157:H7
P75831 0.000406 46 27 3 148 1 macB Macrolide export ATP-binding/permease protein MacB Escherichia coli (strain K12)
Q1RE44 0.000451 46 27 3 148 3 macB Macrolide export ATP-binding/permease protein MacB Escherichia coli (strain UTI89 / UPEC)
A1A9B7 0.000451 46 27 3 148 3 macB1 Macrolide export ATP-binding/permease protein MacB 1 Escherichia coli O1:K1 / APEC
Q0TJH0 0.000463 46 27 3 148 1 macB Macrolide export ATP-binding/permease protein MacB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q8DQH3 0.000541 45 41 0 60 1 ftsX Cell division protein FtsX Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
O35005 0.00058 45 26 8 141 2 ytrF ABC transporter permease YtrF Bacillus subtilis (strain 168)
Q04LE4 0.000629 45 41 0 60 1 ftsX Cell division protein FtsX Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_15955
Feature type CDS
Gene lolE
Product lipoprotein-releasing ABC transporter permease subunit LolE
Location 50405 - 51652 (strand: -1)
Length 1248 (nucleotides) / 415 (amino acids)

Contig

Accession ZDB_532
Length 116685 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1948
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02687 FtsX-like permease family
PF12704 MacB-like periplasmic core domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4591 Cell wall/membrane/envelope biogenesis (M) M ABC-type transport system involved in lipoprotein release, permease component LolC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09808 lipoprotein-releasing system permease protein ABC transporters -

Protein Sequence

MNALPLSLLTALRFSKGRKRAGMVSLISVISTLGITLGVAVLIIGLSAMNGFERELENRVLSVVPQGQISTVEQPFDTWAQSLLRIKNTPGVVAASPYIEFTGLAEKGSKLQAMQLMGVDPVTQKLVSGLPEFVADNAWADFQAGKNQIILGDGAAKSLGVAQGDWLTIMIPNHDSTERLLQPKRIRLQVAGIFRLSGMLDHRLALLPLEDAQQYLDYGEGVTGIEIRTDNVFNANDVVLRAAEASREHVFYKSWINEYGYMYSDIQLVRSIMYLAMILVIGVACFNIVSTLIIAVKDKSGDIAILRTLGAKDSLIRAIFLWYGLLTGMVGCISGAVLGTLAALNLTPLIRGIEFLIGHKLLSGDVYFIDFLPSELRLTDLLYVILTTIVLSLLASWYPARRACRLEPARILSGQ

Flanking regions ( +/- flanking 50bp)

CAGATGGAAATGCGCGACGGTATTCTGAATGCACAGCCGGAGACGGCGCTATGAATGCACTACCGCTGTCATTACTGACTGCGCTGCGTTTCAGCAAAGGGCGGAAACGGGCGGGAATGGTCTCGCTGATTTCCGTTATTTCCACCCTGGGGATCACGCTCGGGGTGGCGGTACTGATTATCGGGCTGAGTGCCATGAACGGCTTCGAGCGTGAGCTGGAGAACCGGGTACTTTCCGTGGTGCCGCAGGGGCAGATTTCCACTGTTGAGCAGCCGTTTGATACCTGGGCGCAGAGCCTGCTGCGGATCAAAAATACTCCGGGTGTGGTGGCCGCCAGCCCGTATATTGAATTTACCGGGCTGGCAGAAAAAGGCAGTAAATTACAGGCCATGCAACTAATGGGCGTGGATCCGGTCACTCAGAAATTGGTGAGCGGATTGCCGGAATTTGTGGCGGATAATGCATGGGCGGATTTTCAGGCCGGGAAAAATCAGATAATCCTTGGTGACGGAGCGGCAAAATCCCTCGGTGTTGCGCAGGGTGACTGGCTCACCATCATGATCCCGAATCACGACAGCACGGAGCGCCTGTTACAGCCGAAACGCATCCGTTTGCAGGTCGCGGGGATTTTCCGCTTAAGCGGCATGCTGGATCACAGGCTGGCGCTGCTGCCGCTGGAAGATGCACAGCAGTACCTGGATTACGGTGAGGGTGTCACAGGTATCGAAATCCGCACGGATAATGTTTTCAATGCCAATGACGTGGTTCTGCGGGCGGCGGAAGCCAGCCGTGAACATGTCTTTTATAAAAGCTGGATCAACGAATACGGCTATATGTACAGCGACATTCAGTTAGTGCGCAGTATTATGTATCTTGCCATGATTCTGGTGATTGGTGTGGCATGCTTCAATATCGTTTCCACCCTGATTATTGCCGTGAAAGACAAAAGCGGGGATATCGCCATTCTGCGCACCCTTGGTGCGAAAGACAGCCTGATCCGCGCCATTTTCCTCTGGTACGGGCTGCTGACCGGTATGGTCGGCTGTATCAGCGGGGCGGTGCTGGGCACGCTGGCGGCGCTGAATCTGACACCGCTTATCCGTGGCATTGAATTCCTTATCGGGCACAAACTGCTGTCCGGTGATGTCTATTTTATTGATTTTCTGCCGTCGGAGCTGCGGCTGACCGATCTGCTGTATGTGATCTTAACCACCATTGTGCTGAGCCTGCTGGCAAGCTGGTATCCGGCGAGACGCGCCTGCCGCCTTGAACCGGCACGTATTCTGAGCGGGCAGTAAAGCCCGCAGGAATTGTAATGATTTTTGAATCCGAAGTGCGGATGCATTAC