Homologs in group_1718

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11990 FBDBKF_11990 100.0 Morganella morganii S1 dppA dipeptide ABC transporter periplasmic-binding protein DppA
EHELCC_14315 EHELCC_14315 100.0 Morganella morganii S2 dppA dipeptide ABC transporter periplasmic-binding protein DppA
LHKJJB_15200 LHKJJB_15200 100.0 Morganella morganii S3 dppA dipeptide ABC transporter periplasmic-binding protein DppA
HKOGLL_14320 HKOGLL_14320 100.0 Morganella morganii S5 dppA dipeptide ABC transporter periplasmic-binding protein DppA
F4V73_RS14665 F4V73_RS14665 93.5 Morganella psychrotolerans - dipeptide ABC transporter periplasmic-binding protein DppA
PMI_RS14065 PMI_RS14065 79.4 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_1718

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1718

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23847 0.0 913 80 1 536 1 dppA Dipeptide-binding protein Escherichia coli (strain K12)
Q9HVS1 0.0 624 56 3 511 1 PA4500 Dipeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZGV2 0.0 624 55 4 528 1 dppA1 Di/tripeptide-binding protein 1 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGN2 0.0 622 56 3 511 1 dppA3 Di/tripeptide-binding protein 3 Pseudomonas aeruginosa (strain UCBPP-PA14)
P33950 0.0 613 56 1 513 1 hbpA Heme-binding protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0A0H2ZGV7 0.0 538 51 2 506 1 dppA4 Di/tripeptide-binding protein 4 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGW2 1.11e-168 491 45 1 506 1 dppA2 Di/tripeptide-binding protein 2 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9HVS4 1.65e-168 490 45 1 506 1 PA4497 Tripeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZI72 8.88e-164 478 44 1 503 1 dppA5 Probable di/tripeptide-binding protein 5 Pseudomonas aeruginosa (strain UCBPP-PA14)
P36634 6.49e-122 372 36 2 515 2 sapA Peptide transport periplasmic protein SapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q47622 2.13e-119 365 36 1 506 3 sapA Probable ABC transporter periplasmic-binding protein SapA Escherichia coli (strain K12)
P45285 2.1e-88 286 29 6 562 3 sapA Peptide transport periplasmic protein SapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q1RE95 4.29e-61 212 30 16 556 3 gsiB Glutathione-binding protein GsiB Escherichia coli (strain UTI89 / UPEC)
Q8CW88 4.29e-61 212 30 16 556 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A968 4.29e-61 212 30 16 556 3 gsiB Glutathione-binding protein GsiB Escherichia coli O1:K1 / APEC
Q8X6V9 7.67e-61 212 30 16 556 3 gsiB Glutathione-binding protein GsiB Escherichia coli O157:H7
Q323W4 3.08e-60 210 30 16 556 3 gsiB Glutathione-binding protein GsiB Shigella boydii serotype 4 (strain Sb227)
Q3Z3V3 3.68e-60 210 30 16 556 3 gsiB Glutathione-binding protein GsiB Shigella sonnei (strain Ss046)
Q821B3 4.72e-60 209 28 13 552 3 gsiB Glutathione-binding protein GsiB Shigella flexneri
Q0TJL8 4.87e-60 209 30 16 556 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q32IB6 6.65e-60 209 30 16 556 3 gsiB Glutathione-binding protein GsiB Shigella dysenteriae serotype 1 (strain Sd197)
Q8ZQM3 6.79e-60 209 29 12 536 3 gsiB Glutathione-binding protein GsiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57RB1 7.69e-60 209 29 12 536 3 gsiB Glutathione-binding protein GsiB Salmonella choleraesuis (strain SC-B67)
Q8Z863 9.66e-60 209 29 12 536 3 gsiB Glutathione-binding protein GsiB Salmonella typhi
P75797 1.16e-59 208 30 16 556 1 gsiB Glutathione-binding protein GsiB Escherichia coli (strain K12)
Q5PGP4 3.32e-59 207 28 12 536 3 gsiB Glutathione-binding protein GsiB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q0T6D2 5.08e-59 207 28 13 553 3 gsiB Glutathione-binding protein GsiB Shigella flexneri serotype 5b (strain 8401)
Q6D3B0 2.06e-57 202 31 11 467 3 gsiB Glutathione-binding protein GsiB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P76128 5.01e-47 174 25 9 532 2 ddpA Probable D,D-dipeptide-binding periplasmic protein DdpA Escherichia coli (strain K12)
P42061 5.63e-40 155 26 18 554 1 appA Oligopeptide-binding protein AppA Bacillus subtilis (strain 168)
P33590 5.39e-36 144 24 16 555 1 nikA Nickel-binding periplasmic protein Escherichia coli (strain K12)
P24141 8.36e-33 135 25 14 472 1 oppA Oligopeptide-binding protein OppA Bacillus subtilis (strain 168)
A0A0H3JTL0 1.23e-29 125 26 15 490 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q2FVE7 1.52e-29 125 26 16 490 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain NCTC 8325 / PS 47)
P26906 2.03e-29 125 26 22 540 1 dppE Dipeptide-binding protein DppE Bacillus subtilis (strain 168)
Q46863 1.08e-27 120 24 19 510 1 ygiS Probable deoxycholate-binding periplasmic protein YgiS Escherichia coli (strain K12)
Q8YDG6 6.73e-27 117 28 16 429 3 BMEII0210 Putative peptide-binding periplasmic protein BMEII0210 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YJK2 3.77e-26 115 28 16 429 3 BAB2_1049 Putative peptide-binding periplasmic protein BAB2_1049 Brucella abortus (strain 2308)
Q8VQK3 3.77e-26 115 28 16 429 3 BruAb2_1030 Putative peptide-binding periplasmic protein BruAb2_1030 Brucella abortus biovar 1 (strain 9-941)
Q8YBP0 1.2e-25 114 30 17 418 3 BMEII0859 Putative ABC transporter peptide-binding protein BMEII0859 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FWN7 1.22e-25 114 30 17 418 3 BRA0409 Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 Brucella suis biovar 1 (strain 1330)
Q2YK66 1.22e-25 114 30 17 418 3 BAB2_0812 Putative ABC transporter peptide-binding protein BAB2_0812 Brucella abortus (strain 2308)
Q577J8 1.22e-25 114 30 17 418 3 BruAb2_0792 Putative ABC transporter peptide-binding protein BruAb2_0792 Brucella abortus biovar 1 (strain 9-941)
A5VU91 1.22e-25 114 30 17 418 3 BOV_A0352 Putative ABC transporter peptide-binding protein BOV_A0352 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8FUX2 2.13e-25 113 28 16 429 3 BRA1090 Putative peptide-binding periplasmic protein BRA1090/BS1330_II1082 Brucella suis biovar 1 (strain 1330)
P23843 2.8e-25 113 24 15 474 1 oppA Periplasmic oligopeptide-binding protein OppA Escherichia coli (strain K12)
P06109 4.2e-25 112 26 17 443 3 xp55 Protein XP55 Streptomyces lividans
P71370 8.18e-23 105 24 24 569 3 oppA Periplasmic oligopeptide-binding protein OppA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P77348 8.79e-23 105 23 18 478 1 mppA Periplasmic murein peptide-binding protein MppA Escherichia coli (strain K12)
P06202 1.05e-22 105 25 20 483 1 oppA Periplasmic oligopeptide-binding protein OppA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q2G2P5 9.05e-20 95 25 13 356 1 nikA Nickel-binding protein NikA Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q9RU24 3.62e-17 88 22 20 577 1 DR_1571 Probable ABC transporter-binding protein DR_1571 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P55669 9.1e-14 77 27 23 409 3 NGR_a01440 Probable peptide ABC transporter periplasmic-binding protein y4tO Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P55691 2.88e-13 76 23 24 519 3 NGR_a00920 Uncharacterized protein y4wM Sinorhizobium fredii (strain NBRC 101917 / NGR234)
A2RI74 9.51e-13 74 24 22 467 1 dppA Dipeptide-binding protein Lactococcus lactis subsp. cremoris (strain MG1363)
P31306 2.51e-12 73 26 12 344 1 sarA Oligopeptide-binding protein SarA Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
O07570 5.59e-12 72 25 19 377 3 yhjP Uncharacterized protein YhjP Bacillus subtilis (strain 168)
P18791 7.49e-11 68 26 9 280 1 amiA Oligopeptide-binding protein AmiA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q9CEK0 4.97e-10 65 24 22 491 3 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. lactis (strain IL1403)
P0A4G1 1.25e-09 64 26 13 361 1 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4G0 1.25e-09 64 26 13 361 3 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P35592 1.96e-08 60 23 14 364 3 aliA Oligopeptide-binding protein AliA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q2YKJ5 3.17e-08 60 21 19 471 3 BAB2_0664 Putative binding protein BAB2_0664 Brucella abortus (strain 2308)
Q577X5 3.17e-08 60 21 19 471 3 BruAb2_0648 Putative binding protein BruAb2_0648 Brucella abortus biovar 1 (strain 9-941)
Q07741 3.35e-08 60 23 12 355 1 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. lactis
Q02VA9 5.44e-08 59 23 13 356 3 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. cremoris (strain SK11)
Q8YC41 6.86e-08 58 21 19 471 3 BMEII0691 Putative binding protein BMEII0691 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FW84 6.95e-07 55 21 19 471 3 BRA0576 Putative binding protein BRA0576/BS1330_II0571 Brucella suis biovar 1 (strain 1330)
Q9X4Y1 1.03e-06 55 24 17 391 2 agpA Periplasmic alpha-galactoside-binding protein Rhizobium meliloti (strain 1021)
P66772 9.15e-06 52 21 15 406 3 BQ2027_MB1311C Uncharacterized protein Mb1311c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WGU5 9.15e-06 52 21 15 406 1 Rv1280c Uncharacterized protein Rv1280c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGU4 9.15e-06 52 21 15 406 3 MT1317 Uncharacterized protein MT1317 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A9CKL4 1.88e-05 51 21 23 506 3 yejA Probable peptide-binding protein YejA Agrobacterium fabrum (strain C58 / ATCC 33970)
P44572 3.68e-05 50 20 20 455 3 HI_0213 Putative binding protein HI_0213 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_15410
Feature type CDS
Gene dppA
Product dipeptide ABC transporter periplasmic-binding protein DppA
Location 90438 - 92054 (strand: 1)
Length 1617 (nucleotides) / 538 (amino acids)

Contig

Accession ZDB_531
Length 138641 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1718
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0747 Amino acid transport and metabolism (E) E ABC-type transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12368 dipeptide transport system substrate-binding protein ABC transporters
Bacterial chemotaxis		 -

Protein Sequence

MMRSANRKTGFAKLGITLVALAVSASVNAAGTLVFCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEFKAGTTELEPGLAESWDVSEDGKTYTFHLRKGVKFHSSKDFKPTRDFNADDVVFTFDRQKNPDNPYHKVSGGSYEYFSGMDMDKIIDKVEKVDDNTVRFQLSRSEAPFLANLGMDFASILSAEYADQMLKAGTPEKVDLNPIGTGPFVLQQYQKDSRILYKANDDYWNGKPKIDRLVFSITPDASVRYAKLQKNECQVMPYPNPADLERMRADKNIVLKEQPGLNVGYLSYNVTKKPLDNAKVRQALNMAVNKDAIIDAVYQGAGQKAKNLIPPTMWGYNNSIEDYPYDPEKAKALLKEAGMENGFEIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKAKIVTYEWGEYLKRAKAGEPQTVMMGWTGDNGDPDNFFATLFSCAAKEQGSNYSKWCDQSFENIIQPARTTADPKERAKLYEQAQVVMKEQAPALIVAHSTVFEPVRKEVKGYVVDPLGKHHFDNVSIEK

Flanking regions ( +/- flanking 50bp)

CTGCCGGACGACAGAGCAAACACGACATTCAACGACAGGCGGAGATAATGATGATGAGAAGCGCCAACCGTAAGACAGGATTTGCGAAGCTGGGTATTACACTGGTTGCTCTGGCGGTATCCGCCAGTGTTAATGCGGCGGGAACGCTGGTTTTTTGTTCTGAGGGATCACCTGAAGGGTTTAACCCGCAGCTGTTCACCTCGGGAACCACTTATGATGCCAGCTCCGTGCCGCTGTATAACCGGCTGGTGGAGTTTAAGGCCGGTACCACAGAGCTGGAGCCGGGCTTGGCGGAATCCTGGGATGTGAGCGAAGACGGAAAAACCTATACGTTCCATCTGCGCAAAGGGGTGAAATTCCACAGCAGCAAGGATTTCAAACCAACCCGTGATTTCAATGCGGATGATGTGGTCTTTACCTTCGACCGCCAGAAAAACCCGGATAACCCGTATCACAAGGTCTCCGGCGGCAGTTATGAATATTTCAGCGGCATGGATATGGATAAAATCATCGATAAAGTTGAGAAGGTCGATGACAACACAGTCCGTTTTCAGCTGAGCCGCTCTGAAGCGCCGTTCCTTGCAAACCTCGGGATGGACTTCGCCTCCATTCTTTCCGCTGAATATGCGGATCAGATGCTGAAAGCCGGTACACCGGAGAAAGTCGACCTGAACCCGATCGGCACCGGGCCGTTTGTGTTGCAGCAGTACCAGAAAGATTCCCGTATCCTGTATAAAGCCAATGACGATTACTGGAACGGCAAACCGAAAATTGACCGCCTGGTCTTCTCCATCACCCCGGATGCTTCTGTCCGTTACGCCAAACTGCAGAAAAACGAGTGTCAGGTAATGCCGTACCCGAACCCGGCAGACCTGGAGCGTATGCGTGCGGATAAAAATATTGTCCTGAAAGAGCAGCCGGGCCTGAACGTCGGCTATCTCTCCTATAACGTCACGAAAAAACCGCTGGATAACGCCAAAGTGCGTCAGGCACTGAATATGGCGGTTAATAAAGATGCCATCATTGACGCGGTGTATCAGGGCGCAGGCCAGAAAGCGAAAAACCTGATCCCGCCGACCATGTGGGGCTACAACAACAGTATCGAAGACTATCCGTATGATCCGGAAAAAGCCAAAGCGCTGCTGAAAGAAGCAGGTATGGAAAACGGCTTTGAAATCGACCTGTGGGCGATGCCGGTTCAGCGTCCGTATAACCCGAACGCCCGCCGTATGGCTGAGATGATCCAGGCAGACTGGGCGAAAGTCGGCGTGAAAGCCAAGATTGTGACCTATGAGTGGGGTGAGTACCTCAAGCGCGCGAAAGCGGGTGAGCCTCAGACTGTCATGATGGGCTGGACCGGTGATAACGGGGATCCGGATAACTTCTTCGCCACACTCTTCAGCTGTGCGGCCAAAGAGCAGGGTTCTAACTACTCGAAATGGTGTGATCAGTCCTTTGAAAACATCATTCAGCCGGCACGTACCACGGCTGATCCGAAAGAGCGCGCCAAGCTGTATGAGCAGGCTCAGGTAGTGATGAAAGAGCAGGCACCTGCACTGATCGTTGCACACTCCACAGTGTTTGAGCCGGTGCGCAAAGAAGTGAAAGGCTATGTGGTGGATCCGCTGGGTAAACACCACTTTGATAATGTTTCTATCGAAAAATAAGTAAACCGGAAATGAGTGTTACCGGTCTGCCGCCTCCTCCGGGGGGCGGC