K12368


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K12368, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K12368
KO K12368
Description dipeptide transport system substrate-binding protein

KO part of 2 pathways

ABC transporters
Bacterial chemotaxis

KO part of 0 modules

Occurence in the database

K12368 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1718 PMI_RS14065 3122524 3124131 -1 ABC transporter substrate-binding protein Proteus mirabilis HI4320
1 group_1718 FBDBKF_11990 46588 48204 -1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S1
2 group_1718 EHELCC_14315 86501 88117 1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S2
3 group_1718 NLDBIP_15410 90438 92054 1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S4
4 group_1718 LHKJJB_15200 46588 48204 -1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S3
5 group_1718 HKOGLL_14320 33251 34867 -1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S5
6 group_1718 F4V73_RS14665 168180 169793 1 dipeptide ABC transporter periplasmic-binding protein DppA Morganella psychrotolerans