Homologs in group_57

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00420 FBDBKF_00420 100.0 Morganella morganii S1 metC cystathionine beta-lyase
FBDBKF_02700 FBDBKF_02700 73.9 Morganella morganii S1 metC cystathionine beta-lyase
EHELCC_01125 EHELCC_01125 100.0 Morganella morganii S2 metC cystathionine beta-lyase
EHELCC_03170 EHELCC_03170 73.9 Morganella morganii S2 metC cystathionine beta-lyase
NLDBIP_00290 NLDBIP_00290 73.9 Morganella morganii S4 metC cystathionine beta-lyase
LHKJJB_01745 LHKJJB_01745 73.9 Morganella morganii S3 metC cystathionine beta-lyase
LHKJJB_03850 LHKJJB_03850 100.0 Morganella morganii S3 metC cystathionine beta-lyase
HKOGLL_01785 HKOGLL_01785 73.9 Morganella morganii S5 metC cystathionine beta-lyase
HKOGLL_03195 HKOGLL_03195 100.0 Morganella morganii S5 metC cystathionine beta-lyase
F4V73_RS05195 F4V73_RS05195 74.2 Morganella psychrotolerans metC cystathionine beta-lyase
PMI_RS00135 PMI_RS00135 42.5 Proteus mirabilis HI4320 metC cystathionine beta-lyase
PMI_RS03085 PMI_RS03085 40.9 Proteus mirabilis HI4320 metC cystathionine beta-lyase

Distribution of the homologs in the orthogroup group_57

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_57

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43623 8.38e-155 442 63 1 328 1 IRC7 Putative cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q52811 5.11e-129 379 49 2 383 3 metC Putative cystathionine beta-lyase Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
P06721 3.2e-115 344 44 4 390 1 metC Cystathionine beta-lyase MetC Escherichia coli (strain K12)
P18949 1.31e-114 343 44 3 388 3 metC Cystathionine beta-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44527 1.45e-111 335 43 5 390 3 metC Cystathionine beta-lyase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q73GL9 2.12e-106 322 41 3 396 1 aar L-alanine/L-glutamate racemase Wolbachia pipientis wMel
Q07703 9.17e-81 256 39 9 382 1 metC Cystathionine beta-lyase Bordetella avium
P56069 8.15e-64 212 33 8 387 1 metB Cystathionine gamma-synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZMW7 9.46e-64 211 34 9 390 3 metB Cystathionine gamma-synthase Helicobacter pylori (strain J99 / ATCC 700824)
Q1M0P5 6.53e-62 207 32 8 388 1 metB Cystathionine gamma-synthase Helicobacter pylori
O05394 2.35e-58 197 32 9 389 1 mccB Cystathionine gamma-lyase Bacillus subtilis (strain 168)
A2RM21 7.06e-58 196 32 7 388 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris (strain MG1363)
P0A4K2 7.06e-58 196 32 7 388 3 metC Cystathionine beta-lyase Lactococcus lactis subsp. lactis (strain IL1403)
Q60HG7 1.04e-57 196 34 7 347 2 CTH Cystathionine gamma-lyase Macaca fascicularis
Q9X0Z7 2.09e-55 190 30 7 367 1 aar L-alanine/L-glutamate racemase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P0C2T9 4.46e-55 189 32 9 391 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris
P55217 9.23e-55 192 31 4 371 1 CGS1 Cystathionine gamma-synthase 1, chloroplastic Arabidopsis thaliana
Q55DV9 9.3e-55 188 29 5 382 1 cysA Cystathionine gamma-lyase Dictyostelium discoideum
O31632 1.05e-54 188 31 8 389 1 metC Cystathionine beta-lyase MetC Bacillus subtilis (strain 168)
Q8VCN5 1.94e-54 187 33 6 347 1 Cth Cystathionine gamma-lyase Mus musculus
Q8L0X4 2.13e-54 187 31 7 377 1 mgl L-methionine gamma-lyase Fusobacterium nucleatum subsp. polymorphum
P18757 2.25e-54 187 33 6 347 1 Cth Cystathionine gamma-lyase Rattus norvegicus
Q19QT7 3.15e-54 187 33 7 347 2 CTH Cystathionine gamma-lyase Sus scrofa
P00935 8.64e-53 183 32 7 398 1 metB Cystathionine gamma-synthase Escherichia coli (strain K12)
P32929 1.58e-52 183 35 4 297 1 CTH Cystathionine gamma-lyase Homo sapiens
P9WGB7 5.01e-52 181 32 8 378 1 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB6 5.01e-52 181 32 8 378 3 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66876 5.01e-52 181 32 8 378 3 metB Cystathionine gamma-synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P24601 8.31e-52 179 33 3 303 3 metB Probable cystathionine gamma-synthase (Fragment) Herpetosiphon aurantiacus
P46807 1.99e-51 179 32 7 378 3 metB Cystathionine gamma-synthase Mycobacterium leprae (strain TN)
Q8RDT4 2.12e-51 180 30 9 378 1 FN1419 L-methionine gamma-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q9C876 3.23e-50 177 29 5 371 3 CGS2 Probable cystathionine gamma-synthase 2 Arabidopsis thaliana
Q7MX71 5.79e-49 173 29 8 382 1 mgl L-methionine gamma-lyase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
Q58DW2 1.11e-48 173 33 4 293 2 CTH Cystathionine gamma-lyase Bos taurus
P55216 1.21e-47 170 34 5 293 3 cth-2 Putative cystathionine gamma-lyase 2 Caenorhabditis elegans
Q83A83 1.51e-47 169 28 7 394 1 metC Cystathionine beta-lyase Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Q73KL7 7.78e-46 165 27 7 381 1 megL L-methionine gamma-lyase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
A0A0J6G7P5 1.02e-43 159 29 9 391 3 megL L-methionine gamma-lyase Pseudomonas deceptionensis
P13254 2.6e-43 158 27 5 381 1 mdeA L-methionine gamma-lyase Pseudomonas putida
Q4L332 4.55e-43 157 30 10 376 1 metC Cystathionine beta-lyase MetC Staphylococcus haemolyticus (strain JCSC1435)
P53780 1.5e-40 152 26 8 384 1 At3g57050 Cystathionine beta-lyase, chloroplastic Arabidopsis thaliana
Q1K8G0 8.63e-39 147 28 11 389 1 met-2 Cystathionine beta-lyase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
P0DXC4 2.5e-37 142 28 7 397 1 JFQ02_10020 Canavanine gamma-lyase Pseudomonas canavaninivorans
O31631 2.76e-37 142 28 9 390 1 metI Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase Bacillus subtilis (strain 168)
A0A0M3VI47 1.55e-36 141 27 10 373 1 CBL Cystathionine beta-lyase, chloroplastic Mimosa pudica
P44502 1.38e-35 137 28 10 387 3 metB Cystathionine gamma-synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q59829 2.63e-34 134 31 8 334 3 cysA Putative cystathionine gamma-lyase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9WZY4 1.21e-33 133 27 11 419 1 TM_0882 O-acetyl-L-homoserine sulfhydrylase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P31373 2.9e-33 131 26 7 341 1 CYS3 Cystathionine gamma-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A8CEI3 3.3e-33 132 26 9 361 1 None Mimosinase, chloroplastic Leucaena leucocephala
P9WGB5 4.13e-33 131 26 4 340 1 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB4 4.13e-33 131 26 4 340 3 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
U6BYK3 4.02e-31 126 23 10 405 1 None Mimosinase, chloroplastic Mimosa pudica
P55218 8.56e-31 124 26 4 334 1 metZ O-succinylhomoserine sulfhydrylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q826W3 1.47e-30 124 29 13 412 1 mgl L-methionine gamma-lyase Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
O94350 3.39e-30 122 25 13 387 3 str3 Cystathionine beta-lyase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0DXD3 5.69e-30 122 29 5 311 1 Rleg2_5066 Canavanine gamma-lyase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Q79VI4 2.03e-28 119 25 9 430 1 metY O-acetyl-L-homoserine sulfhydrylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q9SGU9 1.19e-24 108 27 8 301 1 MGL Methionine gamma-lyase Arabidopsis thaliana
Q92441 4.47e-24 106 27 11 385 3 MET17 Homocysteine/cysteine synthase Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Q5SJ58 2.71e-22 101 28 12 406 1 oah2 O-acetyl-L-homoserine sulfhydrylase 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
O13326 2.89e-22 101 23 8 420 1 met17 Homocysteine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P50125 1.7e-21 99 25 11 424 1 cysD Homocysteine synthase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
P94890 3.03e-21 98 23 10 438 1 metY O-acetyl-L-homoserine sulfhydrylase Leptospira meyeri
P38716 2.09e-20 95 27 11 335 1 YHR112C Uncharacterized trans-sulfuration enzyme YHR112C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5MNH8 5.81e-20 94 24 14 425 2 lolC2 Sulfhydrylase-like protein lolC2 Epichloe uncinata
P06106 8.58e-20 94 26 10 387 1 MET17 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
S0DUX5 2.42e-19 92 24 10 369 1 FUB7 Sulfhydrylase FUB7 Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831)
W7MS09 4.14e-19 92 24 10 373 1 FUB7 Sulfhydrylase FUB7 Gibberella moniliformis (strain M3125 / FGSC 7600)
A0A0D2YG02 5.13e-19 91 24 10 369 1 FUB7 Sulfhydrylase FUB7 Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)
Q5SK88 3.12e-18 89 23 14 421 1 oah1 O-acetyl-L-homoserine sulfhydrylase 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
O42851 6.3e-18 88 27 14 387 1 SPAC23A1.14c Uncharacterized trans-sulfuration enzyme C23A1.14c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8J0B2 6.29e-17 85 24 15 428 2 lolC1 Sulfhydrylase-like protein lolC1 Epichloe uncinata
P53101 1.89e-13 75 24 16 386 1 STR3 Cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
G8XHD7 2.28e-08 59 27 8 241 1 besB L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase Streptantibioticus cattleyicolor (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
P38675 2.37e-07 56 24 8 245 3 met-7 Cystathionine gamma-synthase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
A0A397HQN2 1.07e-06 54 24 10 266 1 ankD Cystathionine gamma-synthase-like protein ankD Aspergillus thermomutatus
O74314 0.000121 47 21 9 247 3 SPBC15D4.09c Probable cystathionine gamma-synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_02335
Feature type CDS
Gene metC
Product cystathionine beta-lyase
Location 434542 - 435735 (strand: -1)
Length 1194 (nucleotides) / 397 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_57
Orthogroup size 13
N. genomes 7

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Genomic region

Domains

PF01053 Cys/Met metabolism PLP-dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0626 Amino acid transport and metabolism (E) E Cystathionine beta-lyase/cystathionine gamma-synthase

Protein Sequence

MSEHARRPLRTETRLTQSGRNPASQYGFVNTPVYRGSTVVFPTYDALINRRAEFHYGTDGTPTIAALENAWSELTGAAGTVLSPSGLGAVTLALLTTLKSGDHLLMTDSVYHPTRQLCGGLLAKMGITTTYYDPLIGAGIESLIRPETTVIFLESPGSQTFEVQDVPAITAVAKRHHVTTVIDNTWATPLFFRAHEHGCDISLEAGTKYPGGHSDVLMGLVSANAQWWPELRKTYDQMAMLPGAEDCFLVLRGLRTLHIRLKEAQHRALKVAEWLQSRPEVSKVLHPAFPECPGHEIWKRDFTGSSGLFSLVLNAEYTTDDLAAMLDGLDIFAMGYSWGGFESLIVPFDCSRYRTVTDWQPGGLTLRLQIGLEDTEDLIADLTAGFERLNAAHGQKK

Flanking regions ( +/- flanking 50bp)

CCTTATGGCAGGATAACAGCATAACCAGTCAGACTATTATTGAGGTGATTATGTCAGAACATGCACGCCGCCCTTTGCGGACAGAAACCCGGCTGACGCAGAGCGGCCGTAACCCCGCATCACAGTACGGATTTGTGAATACCCCGGTATACCGCGGCTCGACGGTTGTCTTCCCGACGTATGATGCCCTGATCAACCGCCGTGCTGAATTTCATTACGGCACTGACGGCACTCCGACGATCGCGGCACTGGAGAATGCCTGGAGTGAACTGACCGGTGCGGCGGGTACGGTGTTATCCCCCAGCGGACTGGGCGCGGTGACACTGGCGCTGCTGACCACTCTGAAAAGCGGCGATCATCTGCTGATGACCGATTCTGTTTATCACCCGACCCGGCAGTTATGCGGCGGTCTGCTGGCAAAGATGGGCATTACCACCACTTATTATGATCCGCTGATCGGCGCGGGGATTGAATCGCTTATCCGCCCGGAAACAACCGTGATTTTCCTTGAATCCCCCGGCTCCCAGACGTTCGAGGTGCAGGATGTTCCGGCGATCACTGCCGTGGCGAAACGCCATCATGTGACAACCGTTATTGATAACACCTGGGCGACCCCGCTCTTTTTCCGCGCTCATGAACACGGCTGTGATATCTCCCTTGAAGCCGGTACCAAATACCCCGGAGGTCATTCGGATGTGCTGATGGGACTGGTTTCCGCTAATGCACAGTGGTGGCCGGAACTGCGAAAAACCTATGATCAGATGGCGATGCTGCCGGGCGCTGAGGATTGTTTCCTTGTGCTGCGCGGTCTGCGCACTCTGCATATCCGCCTGAAGGAAGCACAGCACCGGGCGCTGAAAGTCGCGGAGTGGCTGCAGTCCCGCCCGGAAGTCAGCAAAGTGCTGCATCCTGCCTTCCCGGAATGTCCGGGGCATGAGATCTGGAAGCGGGATTTCACCGGCTCTTCCGGCCTGTTCTCGCTGGTTCTGAATGCGGAATACACCACAGACGACCTGGCGGCCATGCTCGACGGGCTGGATATTTTCGCGATGGGCTATTCCTGGGGTGGGTTTGAAAGCCTGATAGTGCCGTTTGACTGTAGCCGTTACCGGACGGTTACTGACTGGCAGCCGGGCGGACTGACACTGCGTCTGCAAATCGGCCTGGAAGATACGGAGGATTTGATTGCGGATTTGACCGCCGGATTTGAACGGCTGAATGCCGCACACGGACAAAAAAAATAAGCCCGGAAATCCGGGCTTGCTTTCAGAACAATGGTATTAAATGTTCGGCA