Orthogroup:group_57


Homologs in group_57

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00420 FBDBKF_00420 Morganella morganii S1 metC cystathionine beta-lyase
FBDBKF_02700 FBDBKF_02700 Morganella morganii S1 metC cystathionine beta-lyase
EHELCC_01125 EHELCC_01125 Morganella morganii S2 metC cystathionine beta-lyase
EHELCC_03170 EHELCC_03170 Morganella morganii S2 metC cystathionine beta-lyase
NLDBIP_00290 NLDBIP_00290 Morganella morganii S4 metC cystathionine beta-lyase
NLDBIP_02335 NLDBIP_02335 Morganella morganii S4 metC cystathionine beta-lyase
LHKJJB_01745 LHKJJB_01745 Morganella morganii S3 metC cystathionine beta-lyase
LHKJJB_03850 LHKJJB_03850 Morganella morganii S3 metC cystathionine beta-lyase
HKOGLL_01785 HKOGLL_01785 Morganella morganii S5 metC cystathionine beta-lyase
HKOGLL_03195 HKOGLL_03195 Morganella morganii S5 metC cystathionine beta-lyase
F4V73_RS05195 F4V73_RS05195 Morganella psychrotolerans metC cystathionine beta-lyase
PMI_RS00135 PMI_RS00135 Proteus mirabilis HI4320 metC cystathionine beta-lyase
PMI_RS03085 PMI_RS03085 Proteus mirabilis HI4320 metC cystathionine beta-lyase

Distribution of group_57 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_57 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_57

Orthogroup content: 13 members

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This page summarizes the annotation of all members of the orthologous group group_57.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metC 13

Product

# Product Occurence
1 cystathionine beta-lyase 13

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0626 13 E Amino acid transport and metabolism (E) Cystathionine beta-lyase/cystathionine gamma-synthase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01053 13 Cys/Met metabolism PLP-dependent enzyme

Annotations of the 80 SwissProt hits

Annotation Number of occurrences
Alanine racemase ungC 1
Canavanine gamma-lyase 2
Cystathionine beta-lyase 10
Cystathionine beta-lyase MetC 3
Cystathionine beta-lyase, chloroplastic 2
Cystathionine gamma-lyase 9
Cystathionine gamma-synthase 10
Cystathionine gamma-synthase 1, chloroplastic 1
Cystathionine gamma-synthase-like enzyme iboG1 1
Cystathionine gamma-synthase-like protein ankD 1
Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase 1
Homocysteine synthase 2
Homocysteine/cysteine synthase 2
L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase 1
L-alanine/L-glutamate racemase 2
L-methionine gamma-lyase 7
Methionine gamma-lyase 1
Mimosinase, chloroplastic 2
O-acetyl-L-homoserine sulfhydrylase 3
O-acetyl-L-homoserine sulfhydrylase 1 1
O-acetyl-L-homoserine sulfhydrylase 2 1
O-succinylhomoserine sulfhydrylase 3
Probable cystathionine gamma-synthase 1
Probable cystathionine gamma-synthase (Fragment) 1
Probable cystathionine gamma-synthase 2 1
Putative cystathionine beta-lyase 2
Putative cystathionine gamma-lyase 1
Putative cystathionine gamma-lyase 2 1
Sulfhydrylase FUB7 3
Sulfhydrylase-like protein lolC1 1
Sulfhydrylase-like protein lolC2 1
Uncharacterized trans-sulfuration enzyme C23A1.14c 1
Uncharacterized trans-sulfuration enzyme YHR112C 1

Protein length

Min length 391
Max length 397
Mean length (sd) 393.8 (3.1)
Median length 391.0

Protein length distribution