Homologs in group_2770

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07795 FBDBKF_07795 100.0 Morganella morganii S1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB
EHELCC_13625 EHELCC_13625 100.0 Morganella morganii S2 xdhB xanthine dehydrogenase FAD-binding subunit XdhB
NLDBIP_14070 NLDBIP_14070 100.0 Morganella morganii S4 xdhB xanthine dehydrogenase FAD-binding subunit XdhB
HKOGLL_08330 HKOGLL_08330 100.0 Morganella morganii S5 xdhB xanthine dehydrogenase FAD-binding subunit XdhB
F4V73_RS13250 F4V73_RS13250 91.4 Morganella psychrotolerans xdhB xanthine dehydrogenase FAD-binding subunit XdhB

Distribution of the homologs in the orthogroup group_2770

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2770

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46800 1.26e-134 385 61 0 291 4 xdhB Putative xanthine dehydrogenase FAD-binding subunit XdhB Escherichia coli (strain K12)
Q8X6C5 2.03e-133 382 61 0 291 3 xdhB Xanthine dehydrogenase FAD-binding subunit Escherichia coli O157:H7
P19914 3.43e-31 120 31 5 284 1 cutM Carbon monoxide dehydrogenase medium chain Hydrogenophaga pseudoflava
Q4J6M6 1.34e-25 105 26 6 288 1 cutB Glyceraldehyde dehydrogenase medium chain Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
P19920 1.18e-23 100 31 4 281 1 coxM Carbon monoxide dehydrogenase medium chain Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)
O87681 1.45e-23 100 29 5 288 1 kdhA 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha Paenarthrobacter nicotinovorans
Q0QLF4 1.82e-21 95 28 7 253 1 ndhF Nicotinate dehydrogenase FAD-subunit Eubacterium barkeri
Q8GUQ8 7.51e-19 90 28 8 266 1 XDH1 Xanthine dehydrogenase 1 Arabidopsis thaliana
Q59127 4.89e-18 85 24 4 281 1 ndhM Nicotine 6-hydroxylase medium subunit Paenarthrobacter nicotinovorans
F4JLI5 5.22e-18 87 28 7 265 2 XDH2 Xanthine dehydrogenase 2 Arabidopsis thaliana
Q6AUV1 2.84e-15 79 26 7 265 2 XDH Xanthine dehydrogenase Oryza sativa subsp. japonica
P47990 7.31e-15 78 28 6 228 1 XDH Xanthine dehydrogenase/oxidase Gallus gallus
O33820 5.93e-14 74 30 8 267 1 hcrB 4-hydroxybenzoyl-CoA reductase subunit beta Thauera aromatica
Q12553 7.63e-14 75 26 5 261 2 hxA Xanthine dehydrogenase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
D7REY4 9.26e-14 73 25 7 286 1 cdhB Caffeine dehydrogenase subunit beta Pseudomonas sp. (strain CBB1)
P91711 9.78e-14 75 27 10 272 3 Xdh Xanthine dehydrogenase Drosophila subobscura
P10351 2.05e-13 73 27 10 270 2 ry Xanthine dehydrogenase Drosophila melanogaster
P22811 6.5e-13 72 26 9 267 3 ry Xanthine dehydrogenase Drosophila pseudoobscura pseudoobscura
P08793 9.75e-11 65 25 8 239 2 XDH Xanthine dehydrogenase Calliphora vicina
Q5QE79 1.17e-10 65 24 5 269 2 Aox4 Aldehyde oxidase 4 Rattus norvegicus
P48034 1.18e-10 65 26 8 262 1 AOX1 Aldehyde oxidase 1 Bos taurus
P22985 5.67e-10 63 25 10 299 1 Xdh Xanthine dehydrogenase/oxidase Rattus norvegicus
Q3TYQ9 1.28e-09 62 24 6 252 1 Aox4 Aldehyde oxidase 4 Mus musculus
O32145 2.06e-09 60 34 2 115 2 pucC Probable xanthine dehydrogenase subunit C Bacillus subtilis (strain 168)
A0A1U8QNG8 2.49e-09 61 28 7 252 1 hxnS Nicotinate hydroxylase hnxS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
P47989 4.95e-09 60 24 9 300 1 XDH Xanthine dehydrogenase/oxidase Homo sapiens
Q5QE78 1.57e-08 59 23 7 264 2 Aox2 Aldehyde oxidase 2 Rattus norvegicus
H9TB18 3.07e-08 58 24 7 266 2 AOX4 Aldehyde oxidase 4 Cavia porcellus
Q5SGK3 3.18e-08 58 24 8 266 1 Aox2 Aldehyde oxidase 2 Mus musculus
Q8X6J0 6.29e-08 56 26 11 334 3 paoB Aldehyde oxidoreductase FAD-binding subunit PaoB Escherichia coli O157:H7
P80457 6.98e-08 57 22 5 263 1 XDH Xanthine dehydrogenase/oxidase Bos taurus
Q9MYW6 9.83e-08 57 25 6 223 2 XDH Xanthine dehydrogenase/oxidase Felis catus
Q00519 1.15e-07 56 24 10 300 1 Xdh Xanthine dehydrogenase/oxidase Mus musculus
R4ZGN4 1.66e-07 56 22 6 301 1 AXOR Xanthine dehydrogenase Blastobotrys adeninivorans
P77324 2.48e-07 54 26 11 334 1 paoB Aldehyde oxidoreductase FAD-binding subunit PaoB Escherichia coli (strain K12)
O54754 4.98e-07 54 25 8 263 1 Aox1 Aldehyde oxidase 1 Mus musculus
Q9Z0U5 5.07e-07 54 27 4 185 1 Aox1 Aldehyde oxidase 1 Rattus norvegicus
Q54FB7 8.49e-07 53 23 8 281 3 xdh Xanthine dehydrogenase Dictyostelium discoideum
P80456 1.64e-06 53 24 7 262 1 AOX1 Aldehyde oxidase 1 Oryctolagus cuniculus
G3X982 3.75e-06 52 22 7 253 1 Aox3 Aldehyde oxidase 3 Mus musculus
Q5FB27 4e-06 52 23 7 246 2 AOX1 Aldehyde oxidase 1 Macaca fascicularis
H9TB19 2.34e-05 49 23 7 283 2 AOX2 Aldehyde oxidase 2 Cavia porcellus
Q5QE80 5.32e-05 48 23 8 250 1 Aox3 Aldehyde oxidase 3 Rattus norvegicus
Q06278 0.000111 47 23 8 263 1 AOX1 Aldehyde oxidase Homo sapiens
Q69R21 0.000262 46 30 3 106 2 Os07g0282300 Probable aldehyde oxidase 4 Oryza sativa subsp. japonica
C4NYZ3 0.000657 45 26 3 130 2 AOX2 Aldehyde oxidase 2 Macaca fascicularis

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_08780
Feature type CDS
Gene xdhB
Product xanthine dehydrogenase FAD-binding subunit XdhB
Location 84254 - 85132 (strand: 1)
Length 879 (nucleotides) / 292 (amino acids)

Contig

Accession ZDB_365
Length 192330 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2770
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00941 FAD binding domain in molybdopterin dehydrogenase
PF03450 CO dehydrogenase flavoprotein C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1319 Energy production and conversion (C) C Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit

Kegg Ortholog Annotation(s)

Protein Sequence

MYDFETYHRAESVAHAVSLLTADPQARLLAGGTDVLIQLHHLNERFRRIVDIHDLPELRGISCDDAGHIRIGSATTFSELIDSPVINKCLPALSEAAATIAGPQIRNVATYGGNICNGATSGDSACPSLVYQAELEIATPDGIRRRPLRGFHTGPGKVAFEPGELLIAFHFSPENYRGKGSAAYKYAMRGAMDIATINCAALCDIREGRFEELRLAFGVAAPTPVRCEHAEAAAIGKPVTADTLKAVSQAIEQDVAPRTSWRAEKEFRLHLIRVLSERVIRTAAERLGEKIA

Flanking regions ( +/- flanking 50bp)

CGGCTGTACCGGGAATTTGTTAATGCCGGGCTTATCAGGGGGTAACTGCCATGTATGATTTTGAAACTTATCACCGCGCGGAGAGTGTCGCACATGCCGTCTCACTGCTTACGGCGGATCCGCAGGCCAGATTGCTGGCGGGCGGAACGGATGTGCTGATCCAGCTTCATCACCTCAATGAACGCTTCCGCCGTATTGTGGATATCCATGATTTACCGGAGCTGCGCGGGATCAGCTGTGATGATGCGGGGCATATCCGCATCGGCTCCGCGACCACCTTCTCCGAACTGATCGACAGCCCGGTGATCAACAAGTGCCTGCCCGCGCTGAGTGAAGCGGCTGCCACCATTGCCGGACCGCAGATCCGCAACGTTGCCACTTACGGCGGCAATATCTGTAACGGCGCCACCAGCGGCGACTCCGCCTGTCCGTCCCTGGTTTATCAGGCAGAGCTGGAGATAGCCACCCCGGACGGCATCCGCCGCAGACCACTGCGCGGCTTCCATACCGGTCCGGGTAAAGTGGCCTTTGAACCGGGTGAACTGCTGATCGCGTTCCATTTCTCACCGGAGAATTACCGCGGTAAAGGCTCCGCCGCTTATAAATACGCCATGCGCGGCGCGATGGATATCGCCACCATTAACTGCGCGGCACTGTGTGATATCAGAGAAGGACGTTTTGAGGAACTGCGCCTCGCCTTCGGGGTTGCCGCACCGACACCGGTCCGCTGTGAACACGCGGAAGCGGCTGCGATCGGAAAACCGGTCACCGCAGACACCCTGAAAGCCGTCAGTCAGGCGATTGAACAGGATGTGGCACCGCGCACGTCATGGCGGGCAGAGAAAGAGTTCCGTTTACACCTGATCCGCGTCCTGAGCGAGCGGGTGATCCGCACGGCGGCTGAACGTCTGGGAGAAAAAATCGCATGAATATCAAAGAATGGAAAACCATCAGCTGCACACTCAACGGACAGGTACGG