K13479


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K13479, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K13479
KO K13479
Description xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]

KO part of 4 pathways

Purine metabolism
Metabolic pathways
Microbial metabolism in diverse environments
Nucleotide metabolism

KO part of 3 modules

M00546 Purine metabolism Purine degradation, xanthine => urea
M00958 Purine metabolism Adenine ribonucleotide degradation, AMP => Urate
M00959 Purine metabolism Guanine ribonucleotide degradation, GMP => Urate

Occurence in the database

K13479 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2770 FBDBKF_07795 79548 80426 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S1
1 group_2770 EHELCC_13625 53742 54620 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S2
2 group_2770 NLDBIP_14070 74617 75495 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S4
3 group_2770 LHKJJB_08780 84254 85132 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S3
4 group_2770 HKOGLL_08330 84254 85132 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S5
5 group_2770 F4V73_RS13250 277380 278258 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella psychrotolerans