COG1319


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1319, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1319 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2754 FBDBKF_07680 51197 51970 -1 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit Morganella morganii S1
1 group_2770 FBDBKF_07795 79548 80426 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S1
2 group_2754 EHELCC_13510 25391 26164 -1 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit Morganella morganii S2
3 group_2770 EHELCC_13625 53742 54620 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S2
4 group_2754 NLDBIP_13955 46266 47039 -1 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit Morganella morganii S4
5 group_2770 NLDBIP_14070 74617 75495 -1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S4
6 group_2770 LHKJJB_08780 84254 85132 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S3
7 group_2754 LHKJJB_08895 112710 113483 1 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit Morganella morganii S3
8 group_2770 HKOGLL_08330 84254 85132 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella morganii S5
9 group_2754 HKOGLL_08445 112710 113483 1 ygfM Aldehyde, CO, or xanthine dehydrogenase, FAD-binding subunit Morganella morganii S5
10 group_2770 F4V73_RS13250 277380 278258 1 xdhB xanthine dehydrogenase FAD-binding subunit XdhB Morganella psychrotolerans
11 group_2754 F4V73_RS13420 316602 317378 1 ygfM molybdopterin-dependent oxidoreductase FAD-binding subunit Morganella psychrotolerans