Homologs in group_37

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00175 FBDBKF_00175 44.3 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
FBDBKF_00910 FBDBKF_00910 100.0 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_00635 EHELCC_00635 100.0 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_01370 EHELCC_01370 44.3 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02090 NLDBIP_02090 44.3 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02825 NLDBIP_02825 100.0 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
LHKJJB_03605 LHKJJB_03605 44.3 Morganella morganii S3 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
LHKJJB_04340 LHKJJB_04340 100.0 Morganella morganii S3 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_03440 HKOGLL_03440 44.3 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
F4V73_RS06905 F4V73_RS06905 81.5 Morganella psychrotolerans - Kdo(2)-lipid IV(A) acyltransferase
F4V73_RS07715 F4V73_RS07715 42.8 Morganella psychrotolerans lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS03970 PMI_RS03970 43.8 Proteus mirabilis HI4320 lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS08250 PMI_RS08250 77.6 Proteus mirabilis HI4320 - Kdo(2)-lipid IV(A) acyltransferase

Distribution of the homologs in the orthogroup group_37

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_37

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACV0 2.53e-160 452 68 0 306 1 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli (strain K12)
P0ACV1 2.53e-160 452 68 0 306 3 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli O157:H7
P0ACV3 4.88e-127 367 53 1 306 3 lpxP Lipid A biosynthesis acyltransferase Shigella flexneri
P0ACV2 4.88e-127 367 53 1 306 1 lpxP Lipid A biosynthesis palmitoleoyltransferase Escherichia coli (strain K12)
P45239 1.76e-119 348 54 4 306 3 lpxL Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44567 1.14e-42 152 31 5 300 3 lpxM Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24205 2.05e-39 144 33 8 314 1 lpxM Lipid A biosynthesis myristoyltransferase Escherichia coli (strain K12)
P59198 1.39e-38 141 32 8 314 2 lpxM1 Lipid A biosynthesis acyltransferase 1 Shigella flexneri
O06659 3.52e-32 124 30 11 312 2 lpxM2 Lipid A biosynthesis acyltransferase 2 Shigella flexneri

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_02705
Feature type CDS
Gene lpxL
Product Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
Location 142527 - 143468 (strand: -1)
Length 942 (nucleotides) / 313 (amino acids)

Contig

Accession ZDB_680
Length 282413 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_37
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF03279 Bacterial lipid A biosynthesis acyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1560 Lipid transport and metabolism (I) I Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)

Kegg Ortholog Annotation(s)

Protein Sequence

MITAPEFQRSFLHPRYWLTWLGLGVLYVLVLLPYPVIYRLGTRLGRLSMRFLKRRAEIADRNLQLCFPDMPEEKRKAMVVANFESVGMGLFETGMAWFWPDWRVKRWFKVEGREHIQKVQASGQGIIVIGIHFLTLELGARIFGMLNPGIGVYRPNDNPVMDWMQTTGRLRSNKSMLDRKDVKGMIRALRDGQILWYAPDHDYGPRKSVFAPLFAVEKAATTTGTSILVKAGRAALIPFTPRRLPDGKGYELLIQPPADGFPEDDDVAAATFMNHVVEKEILRAPEQYMWLHRRFKTRPEGEPSLYHDRDKVH

Flanking regions ( +/- flanking 50bp)

TTACATGAACCCGCATCTGCTGATGCTTTAAACAATAACGATGTCTGACTATGATTACAGCTCCTGAATTTCAACGCTCGTTTCTGCATCCCCGCTACTGGCTGACCTGGCTTGGCCTGGGTGTACTGTATGTGCTGGTGTTGCTGCCGTATCCGGTGATTTACCGGCTGGGCACCCGTCTGGGTCGTCTGTCCATGCGTTTTCTCAAACGCCGCGCGGAGATTGCTGACCGCAATCTGCAGTTGTGCTTTCCGGATATGCCGGAAGAAAAGCGCAAAGCGATGGTGGTGGCAAATTTTGAATCCGTCGGCATGGGGCTGTTTGAAACCGGAATGGCCTGGTTCTGGCCGGACTGGCGGGTAAAACGCTGGTTTAAGGTGGAAGGCCGCGAACATATTCAGAAAGTACAGGCATCCGGACAAGGTATTATCGTGATAGGCATCCATTTCCTGACCCTGGAACTGGGCGCACGGATTTTCGGTATGCTCAATCCAGGCATCGGGGTTTACCGTCCGAACGATAACCCGGTGATGGACTGGATGCAGACCACCGGTCGTTTGCGATCCAACAAATCCATGCTCGACCGCAAGGATGTCAAAGGGATGATCCGCGCCCTGCGTGACGGACAGATTTTGTGGTATGCACCGGATCACGATTACGGCCCGCGCAAAAGTGTGTTCGCCCCGCTGTTTGCCGTGGAGAAAGCCGCCACCACCACCGGTACGTCTATTCTGGTCAAAGCCGGTCGTGCAGCACTGATCCCGTTCACACCGCGCCGTCTGCCGGACGGAAAAGGCTATGAACTGCTGATCCAGCCCCCTGCGGACGGTTTTCCGGAAGATGATGATGTGGCTGCCGCAACCTTTATGAACCATGTTGTGGAAAAAGAAATTTTACGCGCCCCGGAACAATATATGTGGCTGCATCGGCGCTTCAAAACACGGCCGGAAGGCGAACCGTCCCTCTATCATGACCGGGATAAAGTCCATTAAAAAAGGAATTAAATTACTACCCTGATGCAGAACAAAGCCCCCAACCGTAA