Homologs in group_441

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00175 FBDBKF_00175 100.0 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_01370 EHELCC_01370 100.0 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02090 NLDBIP_02090 100.0 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_03440 HKOGLL_03440 100.0 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
F4V73_RS07715 F4V73_RS07715 64.6 Morganella psychrotolerans lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS03970 PMI_RS03970 64.3 Proteus mirabilis HI4320 lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase

Distribution of the homologs in the orthogroup group_441

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_441

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACV3 2.47e-118 345 54 3 309 3 lpxP Lipid A biosynthesis acyltransferase Shigella flexneri
P0ACV2 2.47e-118 345 54 3 309 1 lpxP Lipid A biosynthesis palmitoleoyltransferase Escherichia coli (strain K12)
P0ACV0 5.66e-91 276 43 2 308 1 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli (strain K12)
P0ACV1 5.66e-91 276 43 2 308 3 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli O157:H7
P45239 5.56e-72 228 38 6 309 3 lpxL Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44567 7.87e-34 129 27 4 301 3 lpxM Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24205 1.86e-22 98 23 6 310 1 lpxM Lipid A biosynthesis myristoyltransferase Escherichia coli (strain K12)
P59198 1.05e-21 96 23 6 310 2 lpxM1 Lipid A biosynthesis acyltransferase 1 Shigella flexneri
O06659 2.81e-15 78 22 9 314 2 lpxM2 Lipid A biosynthesis acyltransferase 2 Shigella flexneri

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_03605
Feature type CDS
Gene lpxL
Product Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
Location 7700 - 8629 (strand: -1)
Length 930 (nucleotides) / 309 (amino acids)
In genomic island GI47

Contig

Accession ZDB_361
Length 286024 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_441
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03279 Bacterial lipid A biosynthesis acyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1560 Lipid transport and metabolism (I) I Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)

Kegg Ortholog Annotation(s)

Protein Sequence

MYSLNKFSIRLLHPRYILTWIGILLLFCLVQMPYPWLVFLGDKLGRFSGLFLKRRVSIIKKNLELCFPDRNKIQIESMVASNLSSLGIALFETGIAWFWNDKRINEIFRVKGCDNFNDVYDKNNGVLIIGIHSMSLELGGRVMGLCFPVNAMYRPHNNKAMEYIQTRCRSRSGSGMIDRKNLKFMVSELKRGQAIWFAPDQDFGTKGTIFAPFFLVANASTSKGVAAIAKLSKSPILTATMIRNNESGKRPYELIIGKEIADFPCGDDLADAEKLNQIIEAEIMHAPDQYLWAHRRFKTRPPGENSLYK

Flanking regions ( +/- flanking 50bp)

ATATTATCAGGCCTTTTTATTATGCAGTAATTATTACTTATCAGGAAAAAATGTACTCTCTGAATAAATTTTCTATCAGGCTTCTTCACCCAAGGTACATATTAACCTGGATTGGTATCCTATTACTTTTCTGTTTGGTTCAGATGCCTTATCCATGGCTTGTGTTTTTAGGCGATAAGTTAGGTCGTTTTTCTGGTTTGTTCCTGAAAAGGCGGGTATCCATAATTAAAAAAAATTTAGAATTATGTTTTCCTGACAGAAATAAAATCCAGATAGAGAGTATGGTCGCAAGTAATCTGTCATCTTTAGGGATTGCATTATTTGAAACCGGTATTGCCTGGTTCTGGAATGACAAAAGAATTAATGAAATATTTAGAGTAAAGGGTTGTGATAATTTCAATGATGTATATGACAAAAATAATGGTGTTTTAATTATTGGTATTCATTCCATGTCACTGGAACTTGGGGGCCGAGTTATGGGGCTGTGTTTTCCTGTAAATGCTATGTATCGTCCCCACAACAATAAAGCAATGGAGTATATACAAACAAGATGCCGAAGCCGTTCCGGAAGCGGGATGATCGACCGTAAGAATCTGAAGTTTATGGTATCGGAACTAAAACGCGGGCAGGCTATTTGGTTTGCTCCGGATCAGGACTTTGGAACTAAAGGTACTATCTTCGCCCCTTTTTTTTTGGTAGCTAATGCTTCTACATCAAAAGGAGTGGCAGCTATAGCCAAATTATCGAAATCGCCGATACTTACTGCAACGATGATAAGAAATAATGAAAGTGGTAAGAGGCCTTATGAATTAATAATTGGTAAAGAAATTGCTGATTTTCCGTGTGGAGATGACCTGGCAGATGCTGAGAAACTAAATCAGATTATTGAGGCAGAAATCATGCATGCTCCGGACCAATACTTGTGGGCACACAGAAGGTTTAAGACCAGACCTCCGGGAGAAAATTCTCTGTACAAATAAGTTACAAAGATTGTCATTGGGTGCCCTATACCCATTACTTATGAGCTGAA