Orthogroup:group_37


Homologs in group_37

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00175 FBDBKF_00175 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
FBDBKF_00910 FBDBKF_00910 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_00635 EHELCC_00635 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_01370 EHELCC_01370 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02090 NLDBIP_02090 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02825 NLDBIP_02825 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
LHKJJB_03605 LHKJJB_03605 Morganella morganii S3 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
LHKJJB_04340 LHKJJB_04340 Morganella morganii S3 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_02705 HKOGLL_02705 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_03440 HKOGLL_03440 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
F4V73_RS06905 F4V73_RS06905 Morganella psychrotolerans - Kdo(2)-lipid IV(A) acyltransferase
F4V73_RS07715 F4V73_RS07715 Morganella psychrotolerans lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS03970 PMI_RS03970 Proteus mirabilis HI4320 lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS08250 PMI_RS08250 Proteus mirabilis HI4320 - Kdo(2)-lipid IV(A) acyltransferase

Distribution of group_37 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_37 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_37

Orthogroup content: 14 members

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This page summarizes the annotation of all members of the orthologous group group_37.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lpxL 12
2 - 2

Product

# Product Occurence
1 Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis) 10
2 Kdo(2)-lipid IV(A) acyltransferase 2
3 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1560 14 I Lipid transport and metabolism (I) Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02517 13 Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] Lipopolysaccharide biosynthesis
Metabolic pathways		 KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type
K12974 1 KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] Lipopolysaccharide biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03279 14 Bacterial lipid A biosynthesis acyltransferase

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
Lipid A biosynthesis acyltransferase 3
Lipid A biosynthesis acyltransferase 1 1
Lipid A biosynthesis acyltransferase 2 1
Lipid A biosynthesis lauroyltransferase 2
Lipid A biosynthesis myristoyltransferase 1
Lipid A biosynthesis palmitoleoyltransferase 1

Protein length

Min length 308
Max length 313
Mean length (sd) 310.9 (2.2)
Median length 311.0

Protein length distribution