Homologs in group_440

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00910 FBDBKF_00910 100.0 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_00635 EHELCC_00635 100.0 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02825 NLDBIP_02825 100.0 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_02705 HKOGLL_02705 100.0 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
F4V73_RS06905 F4V73_RS06905 81.5 Morganella psychrotolerans - Kdo(2)-lipid IV(A) acyltransferase
PMI_RS08250 PMI_RS08250 77.6 Proteus mirabilis HI4320 - Kdo(2)-lipid IV(A) acyltransferase

Distribution of the homologs in the orthogroup group_440

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_440

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACV0 2.53e-160 452 68 0 306 1 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli (strain K12)
P0ACV1 2.53e-160 452 68 0 306 3 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli O157:H7
P0ACV3 4.88e-127 367 53 1 306 3 lpxP Lipid A biosynthesis acyltransferase Shigella flexneri
P0ACV2 4.88e-127 367 53 1 306 1 lpxP Lipid A biosynthesis palmitoleoyltransferase Escherichia coli (strain K12)
P45239 1.76e-119 348 54 4 306 3 lpxL Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44567 1.14e-42 152 31 5 300 3 lpxM Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24205 2.05e-39 144 33 8 314 1 lpxM Lipid A biosynthesis myristoyltransferase Escherichia coli (strain K12)
P59198 1.39e-38 141 32 8 314 2 lpxM1 Lipid A biosynthesis acyltransferase 1 Shigella flexneri
O06659 3.52e-32 124 30 11 312 2 lpxM2 Lipid A biosynthesis acyltransferase 2 Shigella flexneri

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_04340
Feature type CDS
Gene lpxL
Product Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
Location 144114 - 145055 (strand: 1)
Length 942 (nucleotides) / 313 (amino acids)
In genomic island -

Contig

Accession ZDB_361
Length 286024 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_440
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03279 Bacterial lipid A biosynthesis acyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1560 Lipid transport and metabolism (I) I Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)

Kegg Ortholog Annotation(s)

Protein Sequence

MITAPEFQRSFLHPRYWLTWLGLGVLYVLVLLPYPVIYRLGTRLGRLSMRFLKRRAEIADRNLQLCFPDMPEEKRKAMVVANFESVGMGLFETGMAWFWPDWRVKRWFKVEGREHIQKVQASGQGIIVIGIHFLTLELGARIFGMLNPGIGVYRPNDNPVMDWMQTTGRLRSNKSMLDRKDVKGMIRALRDGQILWYAPDHDYGPRKSVFAPLFAVEKAATTTGTSILVKAGRAALIPFTPRRLPDGKGYELLIQPPADGFPEDDDVAAATFMNHVVEKEILRAPEQYMWLHRRFKTRPEGEPSLYHDRDKVH

Flanking regions ( +/- flanking 50bp)

TTACATGAACCCGCATCTGCTGATGCTTTAAACAATAACGATGTCTGACTATGATTACAGCTCCTGAATTTCAACGCTCGTTTCTGCATCCCCGCTACTGGCTGACCTGGCTTGGCCTGGGTGTACTGTATGTGCTGGTGTTGCTGCCGTATCCGGTGATTTACCGGCTGGGCACCCGTCTGGGTCGTCTGTCCATGCGTTTTCTCAAACGCCGCGCGGAGATTGCTGACCGCAATCTGCAGTTGTGCTTTCCGGATATGCCGGAAGAAAAGCGCAAAGCGATGGTGGTGGCAAATTTTGAATCCGTCGGCATGGGGCTGTTTGAAACCGGAATGGCCTGGTTCTGGCCGGACTGGCGGGTAAAACGCTGGTTTAAGGTGGAAGGCCGCGAACATATTCAGAAAGTACAGGCATCCGGACAAGGTATTATCGTGATAGGCATCCATTTCCTGACCCTGGAACTGGGCGCACGGATTTTCGGTATGCTCAATCCAGGCATCGGGGTTTACCGTCCGAACGATAACCCGGTGATGGACTGGATGCAGACCACCGGTCGTTTGCGATCCAACAAATCCATGCTCGACCGCAAGGATGTCAAAGGGATGATCCGCGCCCTGCGTGACGGACAGATTTTGTGGTATGCACCGGATCACGATTACGGCCCGCGCAAAAGTGTGTTCGCCCCGCTGTTTGCCGTGGAGAAAGCCGCCACCACCACCGGTACGTCTATTCTGGTCAAAGCCGGTCGTGCAGCACTGATCCCGTTCACACCGCGCCGTCTGCCGGACGGAAAAGGCTATGAACTGCTGATCCAGCCCCCTGCGGACGGTTTTCCGGAAGATGATGATGTGGCTGCCGCAACCTTTATGAACCATGTTGTGGAAAAAGAAATTTTACGCGCCCCGGAACAATATATGTGGCTGCATCGGCGCTTCAAAACACGGCCGGAAGGCGAACCGTCCCTCTATCATGACCGGGATAAAGTCCATTAAAAAAGGAATTAAATTACTACCCTGATGCAGAACAAAGCCCCCAACCGTAA