Homologs in group_37

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00175 FBDBKF_00175 100.0 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
FBDBKF_00910 FBDBKF_00910 44.3 Morganella morganii S1 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
EHELCC_00635 EHELCC_00635 44.3 Morganella morganii S2 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02090 NLDBIP_02090 100.0 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
NLDBIP_02825 NLDBIP_02825 44.3 Morganella morganii S4 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
LHKJJB_03605 LHKJJB_03605 100.0 Morganella morganii S3 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
LHKJJB_04340 LHKJJB_04340 44.3 Morganella morganii S3 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_02705 HKOGLL_02705 44.3 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
HKOGLL_03440 HKOGLL_03440 100.0 Morganella morganii S5 lpxL Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
F4V73_RS06905 F4V73_RS06905 46.3 Morganella psychrotolerans - Kdo(2)-lipid IV(A) acyltransferase
F4V73_RS07715 F4V73_RS07715 64.6 Morganella psychrotolerans lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS03970 PMI_RS03970 64.3 Proteus mirabilis HI4320 lpxL LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase
PMI_RS08250 PMI_RS08250 45.6 Proteus mirabilis HI4320 - Kdo(2)-lipid IV(A) acyltransferase

Distribution of the homologs in the orthogroup group_37

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_37

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACV3 2.47e-118 345 54 3 309 3 lpxP Lipid A biosynthesis acyltransferase Shigella flexneri
P0ACV2 2.47e-118 345 54 3 309 1 lpxP Lipid A biosynthesis palmitoleoyltransferase Escherichia coli (strain K12)
P0ACV0 5.66e-91 276 43 2 308 1 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli (strain K12)
P0ACV1 5.66e-91 276 43 2 308 3 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli O157:H7
P45239 5.56e-72 228 38 6 309 3 lpxL Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44567 7.87e-34 129 27 4 301 3 lpxM Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24205 1.86e-22 98 23 6 310 1 lpxM Lipid A biosynthesis myristoyltransferase Escherichia coli (strain K12)
P59198 1.05e-21 96 23 6 310 2 lpxM1 Lipid A biosynthesis acyltransferase 1 Shigella flexneri
O06659 2.81e-15 78 22 9 314 2 lpxM2 Lipid A biosynthesis acyltransferase 2 Shigella flexneri

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_01370
Feature type CDS
Gene lpxL
Product Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)
Location 278748 - 279677 (strand: 1)
Length 930 (nucleotides) / 309 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_37
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF03279 Bacterial lipid A biosynthesis acyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1560 Lipid transport and metabolism (I) I Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)

Kegg Ortholog Annotation(s)

Protein Sequence

MYSLNKFSIRLLHPRYILTWIGILLLFCLVQMPYPWLVFLGDKLGRFSGLFLKRRVSIIKKNLELCFPDRNKIQIESMVASNLSSLGIALFETGIAWFWNDKRINEIFRVKGCDNFNDVYDKNNGVLIIGIHSMSLELGGRVMGLCFPVNAMYRPHNNKAMEYIQTRCRSRSGSGMIDRKNLKFMVSELKRGQAIWFAPDQDFGTKGTIFAPFFLVANASTSKGVAAIAKLSKSPILTATMIRNNESGKRPYELIIGKEIADFPCGDDLADAEKLNQIIEAEIMHAPDQYLWAHRRFKTRPPGENSLYK

Flanking regions ( +/- flanking 50bp)

ATATTATCAGGCCTTTTTATTATGCAGTAATTATTACTTATCAGGAAAAAATGTACTCTCTGAATAAATTTTCTATCAGGCTTCTTCACCCAAGGTACATATTAACCTGGATTGGTATCCTATTACTTTTCTGTTTGGTTCAGATGCCTTATCCATGGCTTGTGTTTTTAGGCGATAAGTTAGGTCGTTTTTCTGGTTTGTTCCTGAAAAGGCGGGTATCCATAATTAAAAAAAATTTAGAATTATGTTTTCCTGACAGAAATAAAATCCAGATAGAGAGTATGGTCGCAAGTAATCTGTCATCTTTAGGGATTGCATTATTTGAAACCGGTATTGCCTGGTTCTGGAATGACAAAAGAATTAATGAAATATTTAGAGTAAAGGGTTGTGATAATTTCAATGATGTATATGACAAAAATAATGGTGTTTTAATTATTGGTATTCATTCCATGTCACTGGAACTTGGGGGCCGAGTTATGGGGCTGTGTTTTCCTGTAAATGCTATGTATCGTCCCCACAACAATAAAGCAATGGAGTATATACAAACAAGATGCCGAAGCCGTTCCGGAAGCGGGATGATCGACCGTAAGAATCTGAAGTTTATGGTATCGGAACTAAAACGCGGGCAGGCTATTTGGTTTGCTCCGGATCAGGACTTTGGAACTAAAGGTACTATCTTCGCCCCTTTTTTTTTGGTAGCTAATGCTTCTACATCAAAAGGAGTGGCAGCTATAGCCAAATTATCGAAATCGCCGATACTTACTGCAACGATGATAAGAAATAATGAAAGTGGTAAGAGGCCTTATGAATTAATAATTGGTAAAGAAATTGCTGATTTTCCGTGTGGAGATGACCTGGCAGATGCTGAGAAACTAAATCAGATTATTGAGGCAGAAATCATGCATGCTCCGGACCAATACTTGTGGGCACACAGAAGGTTTAAGACCAGACCTCCGGGAGAAAATTCTCTGTACAAATAAGTTACAAAGATTGTCATTGGGTGCCCTATACCCATTACTTATGAGCTGAA