Homologs in group_317

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_10070 EHELCC_10070 100.0 Morganella morganii S2 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
NLDBIP_10415 NLDBIP_10415 100.0 Morganella morganii S4 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
LHKJJB_10940 LHKJJB_10940 100.0 Morganella morganii S3 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
HKOGLL_14000 HKOGLL_14000 100.0 Morganella morganii S5 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
F4V73_RS08300 F4V73_RS08300 41.1 Morganella psychrotolerans sctV type III secretion system export apparatus subunit SctV
F4V73_RS10625 F4V73_RS10625 81.9 Morganella psychrotolerans - EscV/YscV/HrcV family type III secretion system export apparatus protein
PMI_RS13275 PMI_RS13275 56.2 Proteus mirabilis HI4320 - EscV/YscV/HrcV family type III secretion system export apparatus protein

Distribution of the homologs in the orthogroup group_317

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_317

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1I3 0.0 644 50 5 692 1 invA Invasion protein InvA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1I4 0.0 644 50 5 692 3 invA Invasion protein InvA Salmonella typhi
P0A1I6 0.0 633 49 6 696 3 mxiA Protein MxiA Shigella sonnei
P0A1I5 0.0 633 49 6 696 1 mxiA Protein MxiA Shigella flexneri
P69956 1.52e-167 500 40 11 690 3 lcrD Low calcium response locus protein D Yersinia pseudotuberculosis serotype I (strain IP32953)
P69955 1.52e-167 500 40 11 690 3 lcrD Low calcium response locus protein D Yersinia pestis
P0C2V3 3.2e-167 499 40 11 690 1 lcrD Low calcium response locus protein D Yersinia enterocolitica
A1JU76 1.5e-166 497 40 11 690 3 lcrD Low calcium response locus protein D Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P55726 2.18e-145 442 37 7 690 3 NGR_a00530 Probable translocation protein y4yR Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P74856 1.29e-140 430 37 10 689 1 ssaV Secretion system apparatus protein SsaV Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZWU0 1.29e-140 430 37 10 689 3 ssaV Secretion system apparatus protein SsaV Salmonella typhimurium (strain 14028s / SGSC 2262)
B5FII7 1.29e-140 430 37 10 689 3 ssaV Secretion system apparatus protein SsaV Salmonella dublin (strain CT_02021853)
P35654 1.13e-139 428 37 11 702 3 hrpI Harpin secretion protein HrpI Erwinia amylovora
P35655 1.65e-135 417 37 12 693 3 hrpI Hypersensitivity response secretion protein HrpI Pseudomonas syringae pv. syringae
P35656 1.32e-133 412 38 17 693 3 hrcV Hypersensitivity response secretion protein HrcV Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P80150 4.86e-121 378 37 8 670 3 hrpC2 Protein hrpC2 Xanthomonas euvesicatoria
P76298 4.43e-113 358 35 11 617 3 flhA Flagellar biosynthesis protein FlhA Escherichia coli (strain K12)
D3GS80 1.57e-105 339 32 14 684 3 lfhA Putative flagellar export/assembly protein LfhA Escherichia coli O44:H18 (strain 042 / EAEC)
Q51910 4.4e-105 338 35 12 667 3 flhA Flagellar biosynthesis protein FlhA Proteus mirabilis
Q56887 1.19e-104 337 32 11 681 3 flhA Flagellar biosynthesis protein FlhA Yersinia enterocolitica
P40729 8.25e-104 334 35 11 617 1 flhA Flagellar biosynthesis protein FlhA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P57335 5.96e-102 330 32 11 684 3 flhA Flagellar biosynthesis protein FlhA Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9S0 5.22e-101 327 32 12 687 3 flhA Flagellar biosynthesis protein FlhA Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AN5 1.15e-100 326 33 16 677 3 flhA Flagellar biosynthesis protein FlhA Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q8YDK9 1.62e-100 327 32 15 703 1 flhA Flagellar biosynthesis protein FlhA Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
O67265 1.09e-97 318 33 9 683 3 flhA Flagellar biosynthesis protein FlhA Aquifex aeolicus (strain VF5)
P35620 1.72e-94 309 34 14 713 1 flhA Flagellar biosynthesis protein FlhA Bacillus subtilis (strain 168)
Q9ZM40 4.28e-91 302 31 16 698 3 flhA Flagellar biosynthesis protein FlhA Helicobacter pylori (strain J99 / ATCC 700824)
O06758 1.15e-90 301 31 16 698 1 flhA Flagellar biosynthesis protein FlhA Helicobacter pylori (strain ATCC 700392 / 26695)
Q03845 1.5e-88 294 33 12 703 3 flhA Flagellar biosynthesis protein FlhA Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q44909 5.65e-78 266 29 10 694 3 flhA Flagellar biosynthesis protein FlhA Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q47153 1.83e-71 246 30 13 570 5 lfhA Putative truncated flagellar export/assembly protein LfhA Escherichia coli (strain K12)
Q56338 3.57e-70 245 29 16 683 3 flhA Flagellar biosynthesis protein FlhA Treponema pallidum (strain Nichols)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_09340
Feature type CDS
Gene escV
Product EscV/YscV/HrcV family type III secretion system export apparatus protein
Location 98203 - 100263 (strand: -1)
Length 2061 (nucleotides) / 686 (amino acids)

Contig

Accession contig_10
Length 146103 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_317
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00771 FHIPEP family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4789 Intracellular trafficking, secretion, and vesicular transport (U) U Type III secretory pathway, component EscV

Kegg Ortholog Annotation(s)

Protein Sequence

MLTTFINAIKSRPEIAVLLIMVMVIAMLIIPLPKMLVDFLIGLNIVISILMLLLSFYITRILGFTSFPALLLITTLFRLALSISTSRLILLDADAGNIIQSFGEFVIGENIVVGFVIFAIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLKSGLIDNEEVRKRRKELEQESQMYGAFDGAMKFIKGDAIAGIVIIFVNFAGGIGIGVAQMSMPFSEALSTYTLLTIGDGLVAQIPALLIAISAGFIVTRVSGTNQNLGANIVRELFSHDFTLIVTAVLALCMGMLPGFPAGVFGLLAAGLLLFYGMRLRQNKQKQASDPAKSRSDSRSPAVSASSAGDFAPRGLTAENNEAIPLIITLHTCYQAMFEKQKMTAWLQEEFAFRFGFFLPGIIINYSREIPENKSVILINEIQSGVIYSYPDKYKVTEINDAFESLDIEPFVIEPEGGEKTVWTDKKHDEVCRAAGMGTESGVMVFFNEFSRIMTQNIQELLGIQETKTLLDNIENKYPELLKECYRYLSVQRIADVFQRLIAEQISVRNIKIILGALVQWGQKEKDPLVLVEHVRSHLARYISAHFACDQVLRAVVLSNPLEEMIRQGIRQSAGGTFINLEPAQLDHFYDAMSLVMTPLRHRRDIVFLTAMDVRRFVRKLTEMHYPGIAVLSFSEIVPSAQVSVIDSV

Flanking regions ( +/- flanking 50bp)

TATGAGCAAAACTATTAATATCTTATAACTTTCACCGGCAATGGATTGCTATGCTGACAACTTTTATTAATGCGATCAAAAGCAGGCCGGAGATCGCGGTACTGCTGATTATGGTGATGGTGATCGCTATGCTGATCATTCCGCTGCCGAAAATGCTGGTCGATTTTCTGATCGGGCTGAACATCGTTATTTCTATCCTGATGTTACTGCTCTCTTTCTATATCACCCGGATTCTGGGGTTTACCTCTTTTCCGGCACTTTTGCTGATCACCACACTGTTCCGGCTGGCGCTGTCCATCAGTACCAGCCGTCTGATCCTGCTGGATGCGGATGCCGGGAATATCATTCAGTCATTCGGTGAATTTGTTATCGGCGAAAATATTGTGGTCGGATTTGTGATTTTTGCCATTGTTACCGTGGTGCAGTTTATTGTCATCACCAAAGGGTCGGAGCGTGTGGCGGAAGTGGCGGCACGTTTCTCTCTCGACGGTATGCCCGGCAAGCAGATGAGTATTGATGCGGATCTGAAATCCGGCCTGATTGATAATGAAGAGGTGCGCAAACGCCGGAAAGAGCTGGAGCAGGAGAGTCAGATGTACGGTGCGTTTGACGGCGCGATGAAGTTTATCAAAGGGGATGCAATCGCCGGAATTGTCATCATTTTTGTGAATTTTGCCGGCGGAATTGGTATCGGTGTTGCGCAGATGTCGATGCCGTTCAGTGAAGCGCTGAGTACTTACACACTGCTGACGATCGGGGATGGCCTGGTGGCACAGATCCCGGCGTTGCTGATTGCCATCAGCGCCGGGTTTATTGTCACCCGGGTCAGCGGCACCAATCAGAATTTAGGGGCCAATATTGTCAGGGAGCTGTTTTCCCATGATTTTACCCTGATAGTGACCGCTGTTCTGGCGCTGTGTATGGGAATGCTGCCGGGGTTTCCGGCTGGTGTTTTCGGTCTGCTGGCTGCCGGGCTGCTGTTGTTTTACGGAATGCGCCTCAGACAAAATAAGCAGAAGCAGGCATCTGATCCGGCAAAAAGCCGCTCTGACAGCCGTTCTCCGGCGGTATCTGCGTCGTCTGCGGGGGATTTTGCGCCGCGCGGACTGACGGCGGAAAACAATGAAGCGATTCCGCTGATTATCACCCTCCACACCTGTTATCAGGCTATGTTTGAAAAACAGAAGATGACGGCATGGTTGCAGGAGGAATTTGCCTTCCGTTTCGGTTTCTTTTTACCCGGCATCATTATCAATTACAGCCGTGAGATACCGGAAAATAAATCGGTGATCTTAATTAATGAGATTCAGTCCGGTGTGATTTACAGCTATCCGGATAAATACAAAGTGACAGAAATAAATGATGCCTTTGAGTCACTGGATATTGAACCATTCGTGATTGAGCCGGAAGGCGGGGAGAAAACCGTCTGGACGGATAAAAAACACGATGAGGTATGCCGGGCAGCCGGGATGGGAACAGAATCCGGTGTTATGGTATTTTTCAATGAATTCAGCCGGATAATGACACAAAATATTCAGGAGCTGCTTGGCATCCAGGAAACCAAAACATTGCTGGATAATATTGAGAATAAATATCCGGAGCTGCTGAAAGAGTGTTACCGCTATTTATCTGTTCAGCGTATTGCGGATGTCTTTCAGCGGCTTATCGCTGAGCAGATCTCTGTCCGTAATATCAAAATTATCCTCGGCGCACTGGTGCAGTGGGGGCAGAAAGAAAAAGATCCGCTGGTACTGGTTGAGCATGTCCGCAGCCACCTGGCCCGTTACATCTCAGCGCATTTTGCCTGTGATCAGGTCCTGCGGGCGGTGGTGCTGTCAAACCCGCTGGAGGAGATGATCCGTCAGGGGATCCGCCAGTCTGCCGGAGGTACTTTTATCAATCTCGAACCGGCGCAGCTGGATCATTTTTATGATGCGATGTCATTGGTGATGACGCCGCTGCGGCACCGGCGGGATATTGTTTTCCTGACGGCAATGGATGTCCGCCGCTTTGTCCGGAAACTGACTGAAATGCACTATCCGGGTATTGCCGTGCTGTCATTTTCTGAAATTGTTCCGTCGGCACAGGTGTCGGTGATTGATTCTGTTTAATGTCATAACAAGGAAACTGAAGATGGATCTTGCAACACTGGTTACAGAAG