Homologs in group_317

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09340 FBDBKF_09340 56.2 Morganella morganii S1 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
EHELCC_10070 EHELCC_10070 56.2 Morganella morganii S2 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
NLDBIP_10415 NLDBIP_10415 56.2 Morganella morganii S4 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
LHKJJB_10940 LHKJJB_10940 56.2 Morganella morganii S3 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
HKOGLL_14000 HKOGLL_14000 56.2 Morganella morganii S5 escV EscV/YscV/HrcV family type III secretion system export apparatus protein
F4V73_RS08300 F4V73_RS08300 41.0 Morganella psychrotolerans sctV type III secretion system export apparatus subunit SctV
F4V73_RS10625 F4V73_RS10625 56.8 Morganella psychrotolerans - EscV/YscV/HrcV family type III secretion system export apparatus protein

Distribution of the homologs in the orthogroup group_317

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_317

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1I3 0.0 679 50 4 700 1 invA Invasion protein InvA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1I4 0.0 679 50 4 700 3 invA Invasion protein InvA Salmonella typhi
P0A1I6 0.0 654 50 5 706 3 mxiA Protein MxiA Shigella sonnei
P0A1I5 0.0 654 50 5 706 1 mxiA Protein MxiA Shigella flexneri
P69956 1.78e-178 528 42 11 704 3 lcrD Low calcium response locus protein D Yersinia pseudotuberculosis serotype I (strain IP32953)
P69955 1.78e-178 528 42 11 704 3 lcrD Low calcium response locus protein D Yersinia pestis
P0C2V3 1.21e-176 523 41 11 704 1 lcrD Low calcium response locus protein D Yersinia enterocolitica
A1JU76 1.53e-176 523 41 11 704 3 lcrD Low calcium response locus protein D Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P35654 8.71e-148 450 36 11 715 3 hrpI Harpin secretion protein HrpI Erwinia amylovora
P55726 3.14e-146 445 36 10 688 3 NGR_a00530 Probable translocation protein y4yR Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P35655 7.4e-142 434 35 10 699 3 hrpI Hypersensitivity response secretion protein HrpI Pseudomonas syringae pv. syringae
P74856 9.01e-138 423 35 11 708 1 ssaV Secretion system apparatus protein SsaV Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZWU0 9.01e-138 423 35 11 708 3 ssaV Secretion system apparatus protein SsaV Salmonella typhimurium (strain 14028s / SGSC 2262)
B5FII7 9.01e-138 423 35 11 708 3 ssaV Secretion system apparatus protein SsaV Salmonella dublin (strain CT_02021853)
P35656 7.59e-130 402 35 9 676 3 hrcV Hypersensitivity response secretion protein HrcV Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P80150 3.21e-125 389 36 11 677 3 hrpC2 Protein hrpC2 Xanthomonas euvesicatoria
D3GS80 1.57e-110 352 31 12 717 3 lfhA Putative flagellar export/assembly protein LfhA Escherichia coli O44:H18 (strain 042 / EAEC)
P76298 3.32e-105 338 32 16 700 3 flhA Flagellar biosynthesis protein FlhA Escherichia coli (strain K12)
O67265 6.08e-104 335 34 18 713 3 flhA Flagellar biosynthesis protein FlhA Aquifex aeolicus (strain VF5)
Q8K9S0 2.35e-101 328 32 12 689 3 flhA Flagellar biosynthesis protein FlhA Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57335 9.99e-101 327 31 10 683 3 flhA Flagellar biosynthesis protein FlhA Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AN5 1.12e-98 322 32 16 698 3 flhA Flagellar biosynthesis protein FlhA Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P35620 1.26e-98 321 36 13 690 1 flhA Flagellar biosynthesis protein FlhA Bacillus subtilis (strain 168)
Q8YDK9 6.9e-98 320 31 14 713 1 flhA Flagellar biosynthesis protein FlhA Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q56887 1.64e-96 315 31 17 701 3 flhA Flagellar biosynthesis protein FlhA Yersinia enterocolitica
P40729 5.87e-95 311 32 18 699 1 flhA Flagellar biosynthesis protein FlhA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q51910 1.47e-92 305 32 15 699 3 flhA Flagellar biosynthesis protein FlhA Proteus mirabilis
Q03845 1.3e-86 290 32 13 681 3 flhA Flagellar biosynthesis protein FlhA Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
O06758 5.09e-86 289 31 18 716 1 flhA Flagellar biosynthesis protein FlhA Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZM40 7.24e-86 288 31 18 716 3 flhA Flagellar biosynthesis protein FlhA Helicobacter pylori (strain J99 / ATCC 700824)
Q44909 1.13e-82 279 30 13 709 3 flhA Flagellar biosynthesis protein FlhA Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q47153 4.9e-79 266 29 11 604 5 lfhA Putative truncated flagellar export/assembly protein LfhA Escherichia coli (strain K12)
Q56338 4.8e-68 239 29 18 698 3 flhA Flagellar biosynthesis protein FlhA Treponema pallidum (strain Nichols)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13275
Feature type CDS
Gene -
Product EscV/YscV/HrcV family type III secretion system export apparatus protein
Location 2944792 - 2946891 (strand: -1)
Length 2100 (nucleotides) / 699 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_317
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00771 FHIPEP family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4789 Intracellular trafficking, secretion, and vesicular transport (U) U Type III secretory pathway, component EscV

Kegg Ortholog Annotation(s)

Protein Sequence

MIYKFLLAIKNKPELIVLSVMILVIMMLIIPLPTYLVDFLIGLNITIAILIFMSSFYIKRILNFMTFPALLLITTLFRLALSISTSRLILLDADAGEIITSFGEFVIGENLVVGFVVFSIVTIVQFLVITKGSERVAEVAARFSLDGMPGKQMSIDADLKSGIITNEEVQIRRKELGQESQLYGSFDGAMKFIKGDAIAGIVIIFVNLIGGISVGMAQMGLSITEALHTYTLLTIGDGLVAQIPALLISISAGFIVTRVGGENNNLGYSIMNELLAQDFALLVTAILAFGIGFLPGFPTPVFLILSVMLGVYFFKIKWKSSKKEYKTEDEKDNHNATNADSKKGLMSNLFSGKHGEEVDNSLLTENITLSQAETLPLIITLSTKKKPYLTKIVFEKWLQKEFILQYGILLPDIVIHYSDKIDDDKIIILINEVKAKELNCPFPLFHIENPNDELLSLGFNLISIEDDNKTHYWIERDDESKLAPLGYKAERSESYFYRKFSDLITLNITEFLGIQETKDILDKLEKSAPELLKECYRQVSIQRINDVLQRLVQEKIPIRNIKTIIGGLVQWGSKEKDPVLLTEHIRTLLARYISYFFSTDGKFNAIILSNDMEEIIRSGIRQSSSGTLLNLEPAELDMIIEKISMVIDDIKYIQDYIFLTSIDIRRFVKKLIETQYPQIPVLSYDEITSDIEINVLQSI

Flanking regions ( +/- flanking 50bp)

GAGCAATATCAATTAAGAAAATAAAAAACAATTAATTATTGGCAAAGTTTATGATTTATAAGTTTCTATTAGCAATAAAAAACAAACCAGAACTTATCGTACTATCAGTGATGATACTGGTTATAATGATGTTAATTATACCTTTGCCAACTTATTTGGTCGACTTTCTTATAGGTTTAAATATTACTATTGCAATTCTTATCTTTATGAGTTCATTTTATATTAAACGTATACTGAACTTTATGACATTTCCTGCATTATTGCTTATAACAACTCTTTTCCGGCTTGCTTTATCAATAAGCACTAGCCGTCTTATATTATTAGATGCCGATGCAGGAGAGATCATTACCTCATTTGGTGAGTTTGTCATTGGTGAAAATCTTGTTGTAGGTTTTGTTGTCTTTTCCATTGTGACCATAGTGCAATTTCTCGTGATTACTAAAGGATCTGAACGAGTAGCGGAGGTCGCGGCTCGTTTTTCTTTGGATGGTATGCCTGGAAAACAAATGAGTATTGATGCTGATTTAAAATCAGGGATCATTACGAATGAAGAAGTTCAGATCAGAAGGAAAGAGTTAGGACAAGAGAGTCAATTATATGGTTCATTCGATGGTGCCATGAAATTTATAAAAGGGGATGCGATAGCCGGCATTGTCATTATCTTCGTGAACTTAATTGGTGGCATATCGGTAGGTATGGCTCAAATGGGGTTATCTATTACAGAGGCATTACATACATATACACTTTTAACGATAGGGGATGGATTAGTTGCACAAATTCCTGCTTTACTTATCTCTATTAGTGCCGGATTTATTGTAACACGTGTCGGTGGTGAAAATAATAATTTGGGCTATAGCATTATGAATGAGCTATTGGCACAAGATTTTGCTTTGCTTGTTACAGCTATTTTGGCTTTTGGTATCGGTTTTTTACCAGGATTTCCCACACCTGTTTTTCTTATTTTATCTGTAATGCTTGGCGTTTACTTTTTTAAAATAAAATGGAAGAGTAGTAAAAAAGAATATAAAACAGAAGATGAAAAAGATAATCATAATGCTACTAATGCCGACAGTAAAAAAGGACTTATGTCAAATTTATTTTCTGGTAAACATGGGGAAGAAGTAGATAATAGTTTATTAACAGAAAATATTACCTTATCACAAGCTGAAACTTTGCCATTAATCATCACTCTTTCTACTAAGAAAAAACCATATTTAACAAAAATAGTTTTTGAAAAATGGTTACAAAAAGAATTTATTTTACAATATGGTATATTATTACCAGATATTGTGATTCACTATTCAGATAAAATAGATGACGATAAAATTATTATTTTAATTAACGAAGTTAAAGCAAAAGAACTTAATTGTCCTTTTCCTCTTTTTCATATAGAAAATCCTAATGATGAATTGCTCTCTTTAGGCTTTAACTTAATAAGTATTGAAGATGATAATAAAACCCATTATTGGATTGAGCGTGATGATGAATCTAAATTAGCGCCATTAGGTTACAAAGCGGAACGTTCAGAAAGTTACTTTTATAGAAAATTCTCTGATCTGATCACATTAAATATTACAGAGTTTCTTGGTATTCAAGAAACAAAAGATATCCTTGATAAATTAGAAAAGAGTGCCCCTGAGCTTTTAAAAGAGTGTTATAGGCAAGTTTCTATTCAGAGGATAAATGATGTTTTGCAACGATTAGTACAAGAAAAAATTCCTATTAGAAACATAAAGACTATTATAGGGGGCTTAGTTCAATGGGGGAGCAAAGAAAAAGATCCCGTGCTACTTACTGAACACATTAGAACGCTTCTTGCTCGTTATATTAGTTATTTTTTTTCAACCGATGGGAAGTTTAATGCAATTATCTTATCTAACGATATGGAAGAGATAATTCGTAGTGGAATAAGACAAAGTTCTTCTGGCACATTATTGAATTTAGAACCTGCTGAATTAGATATGATAATAGAAAAAATATCTATGGTTATTGATGATATTAAATATATTCAGGATTATATATTTTTAACATCAATAGATATAAGGCGTTTTGTAAAAAAACTAATAGAAACTCAATATCCTCAAATACCGGTATTATCTTATGATGAGATAACATCTGATATTGAAATTAATGTATTACAATCTATTTAGGAGTGATTATGTCTTTTGATCTTGCTAGCTTACTTATGGATGCAATGAAT