Homologs in group_940

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_12475 EHELCC_12475 100.0 Morganella morganii S2 topA type I DNA topoisomerase
NLDBIP_12815 NLDBIP_12815 100.0 Morganella morganii S4 topA type I DNA topoisomerase
LHKJJB_12675 LHKJJB_12675 100.0 Morganella morganii S3 topA type I DNA topoisomerase
HKOGLL_11290 HKOGLL_11290 100.0 Morganella morganii S5 topA type I DNA topoisomerase
F4V73_RS05570 F4V73_RS05570 92.9 Morganella psychrotolerans topA type I DNA topoisomerase
PMI_RS06435 PMI_RS06435 82.4 Proteus mirabilis HI4320 topA type I DNA topoisomerase

Distribution of the homologs in the orthogroup group_940

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_940

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06612 0.0 1472 80 3 865 1 topA DNA topoisomerase 1 Escherichia coli (strain K12)
P0A2I1 0.0 1463 80 3 865 3 topA DNA topoisomerase 1 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2I2 0.0 1463 80 3 865 3 topA DNA topoisomerase 1 Salmonella typhi
Q9KRB2 0.0 1280 69 5 870 3 topA DNA topoisomerase 1 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P43012 0.0 1275 69 4 871 3 topA DNA topoisomerase 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CN30 0.0 1266 69 4 871 3 topA DNA topoisomerase 1 Pasteurella multocida (strain Pm70)
Q9HZJ5 0.0 1213 67 5 865 3 topA DNA topoisomerase 1 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P57371 0.0 998 55 7 866 3 topA DNA topoisomerase 1 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9P7 0.0 948 52 8 861 3 topA DNA topoisomerase 1 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q4L5V2 1.79e-173 521 39 14 749 3 topA DNA topoisomerase 1 Staphylococcus haemolyticus (strain JCSC1435)
Q5HGI2 3.93e-172 517 39 12 733 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain COL)
Q5HGI2 1.27e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain COL)
Q2FZ32 3.93e-172 517 39 12 733 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FZ32 1.27e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FHI8 3.93e-172 517 39 12 733 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain USA300)
Q2FHI8 1.27e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain USA300)
Q8NWZ9 4.06e-172 517 39 12 733 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MW2)
Q8NWZ9 1.13e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MW2)
Q6G9W3 4.06e-172 517 39 12 733 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MSSA476)
Q6G9W3 1.13e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MSSA476)
Q6GHI5 4.06e-172 517 39 12 733 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MRSA252)
Q6GHI5 1.13e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MRSA252)
Q7A5Y5 4.06e-172 517 39 12 733 1 topA DNA topoisomerase 1 Staphylococcus aureus (strain N315)
Q7A5Y5 1.13e-05 52 38 1 62 1 topA DNA topoisomerase 1 Staphylococcus aureus (strain N315)
Q99UM1 4.06e-172 517 39 12 733 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q99UM1 1.13e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q06AK7 5.2e-172 517 39 13 734 3 topA DNA topoisomerase 1 Staphylococcus aureus
Q06AK7 1.15e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus
Q2YXL8 1.51e-171 516 39 12 733 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q2YXL8 1.11e-05 52 38 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q9KA23 2.1e-168 508 39 10 728 3 topA DNA topoisomerase 1 Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q9KA23 3.61e-06 54 50 3 62 3 topA DNA topoisomerase 1 Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q8CSU3 4.36e-168 507 38 11 745 3 topA DNA topoisomerase 1 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q8CSU3 1.23e-05 52 47 2 55 3 topA DNA topoisomerase 1 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HPU2 4.36e-168 507 38 11 745 3 topA DNA topoisomerase 1 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q5HPU2 1.23e-05 52 47 2 55 3 topA DNA topoisomerase 1 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q49X35 1.42e-167 505 39 12 731 3 topA DNA topoisomerase 1 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q49X35 1.35e-05 52 50 1 44 3 topA DNA topoisomerase 1 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q9PLZ2 7.88e-165 499 38 14 752 3 topA DNA topoisomerase 1 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P39814 2.77e-164 497 39 12 748 1 topA DNA topoisomerase 1 Bacillus subtilis (strain 168)
Q9CG80 1.8e-158 483 37 13 746 3 topA DNA topoisomerase 1 Lactococcus lactis subsp. lactis (strain IL1403)
Q4UM42 3.35e-157 481 38 17 796 3 topA DNA topoisomerase 1 Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92IH1 1.76e-156 480 38 16 785 3 topA DNA topoisomerase 1 Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q1RIM1 1.2e-153 473 41 10 649 3 topA DNA topoisomerase 1 Rickettsia bellii (strain RML369-C)
Q68X45 3.19e-153 471 38 20 786 3 topA DNA topoisomerase 1 Rickettsia typhi (strain ATCC VR-144 / Wilmington)
P55991 4.25e-149 459 38 20 747 1 topA DNA topoisomerase 1 Helicobacter pylori (strain ATCC 700392 / 26695)
P55991 7.04e-06 53 33 6 130 1 topA DNA topoisomerase 1 Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZDK2 5.94e-149 460 41 11 649 3 topA DNA topoisomerase 1 Rickettsia prowazekii (strain Madrid E)
O83409 1.7e-146 452 36 15 763 3 topA DNA topoisomerase 1 Treponema pallidum (strain Nichols)
Q9ZMV7 1.97e-145 450 37 19 747 3 topA DNA topoisomerase 1 Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZMV7 1.55e-05 52 32 6 131 3 topA DNA topoisomerase 1 Helicobacter pylori (strain J99 / ATCC 700824)
Q87AQ6 2.8e-143 447 42 10 603 3 topA DNA topoisomerase 1 Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9PEV8 1.43e-141 442 41 10 603 3 topA DNA topoisomerase 1 Xylella fastidiosa (strain 9a5c)
Q9X909 2.23e-138 438 44 10 600 3 topA DNA topoisomerase 1 Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
A0R5D9 1.93e-133 424 42 13 621 1 topA DNA topoisomerase 1 Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
O69548 5.36e-132 421 39 17 698 3 topA DNA topoisomerase 1 Mycobacterium leprae (strain TN)
Q9X3X7 1.81e-131 426 38 12 655 3 topA DNA topoisomerase 1 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
P9WG49 2.5e-131 419 39 18 698 1 topA DNA topoisomerase 1 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WG48 2.5e-131 419 39 18 698 3 topA DNA topoisomerase 1 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5U8X0 2.5e-131 419 39 18 698 1 topA DNA topoisomerase 1 Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
P0A621 2.5e-131 419 39 18 698 3 topA DNA topoisomerase 1 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P73810 1.41e-130 416 41 9 590 3 topA DNA topoisomerase 1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O34204 1.3e-128 405 38 13 630 3 topA DNA topoisomerase 1 Fervidobacterium islandicum
P34185 7.33e-125 400 40 7 589 3 topA DNA topoisomerase 1 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P46799 2.27e-122 386 38 17 633 1 topA DNA topoisomerase 1 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
O66893 3.38e-110 351 37 10 577 3 topA DNA topoisomerase 1 Aquifex aeolicus (strain VF5)
Q9PHK2 4.69e-102 333 34 14 650 3 XF_a0003 DNA topoisomerase I, plasmid Xylella fastidiosa (strain 9a5c)
O51768 6.13e-102 338 34 7 590 3 topA DNA topoisomerase 1 Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
P78032 5.45e-99 327 31 20 734 3 topA DNA topoisomerase 1 Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q5UQB5 5.92e-98 328 33 17 651 1 TOP1P DNA topoisomerase 1 type prokaryotic Acanthamoeba polyphaga mimivirus
P47368 1.45e-96 320 31 17 731 3 topA DNA topoisomerase 1 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q9JN65 4.62e-96 319 33 22 726 3 topA DNA topoisomerase 1 Mycoplasmoides gallisepticum (strain R(low / passage 15 / clone 2))
Q59046 3.41e-69 247 28 26 790 3 topA DNA topoisomerase 1 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O27661 8.52e-63 228 27 22 689 3 topA DNA topoisomerase 1 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q9UZ86 1.14e-57 218 29 19 617 3 rgy Reverse gyrase Pyrococcus abyssi (strain GE5 / Orsay)
P95479 3.73e-55 211 28 17 612 1 rgy Reverse gyrase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
O67037 7.67e-54 206 29 13 582 3 rgy1 Reverse gyrase 1 Aquifex aeolicus (strain VF5)
Q74MA4 2.6e-53 201 29 20 614 1 rgyA Reverse gyrase subunit A Nanoarchaeum equitans (strain Kin4-M)
Q9UYS8 3.5e-53 200 28 21 625 3 topA DNA topoisomerase 1 Pyrococcus abyssi (strain GE5 / Orsay)
O67226 6.41e-51 197 27 16 601 3 rgy2 Reverse gyrase 2 Aquifex aeolicus (strain VF5)
Q971T7 2.03e-50 196 27 16 620 1 rgy1 Reverse gyrase 1 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
O58356 2.53e-48 186 28 22 608 3 topA DNA topoisomerase 1 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
O51934 1.98e-47 186 28 19 611 1 rgy Reverse gyrase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q8ZXT5 9.62e-47 185 27 18 626 3 rgy Reverse gyrase Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2)
Q8R979 9.21e-46 181 26 16 609 1 rgy Reverse gyrase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Q97ZF5 1.44e-45 181 28 18 624 1 rgy2 Reverse gyrase 2 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
O29238 8.19e-45 178 27 19 609 1 rgy Reverse gyrase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O28469 2.77e-44 174 28 20 593 3 topA DNA topoisomerase 1 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q08582 2.83e-44 177 25 16 663 1 rgy1 Reverse gyrase 1 Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
P0DW67 1.56e-43 174 26 16 609 2 rgy2 Reverse gyrase 2 Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q975P6 9.79e-43 172 26 22 656 3 rgy2 Reverse gyrase 2 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
P74759 3.3e-41 167 27 20 638 1 rgy Reverse gyrase Saccharolobus shibatae (strain ATCC 51178 / DSM 5389 / JCM 8931 / NBRC 15437 / B12)
Q81IH1 2.26e-40 163 26 22 684 3 topB DNA topoisomerase 3 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q6HP19 2.36e-39 160 26 22 684 3 topB DNA topoisomerase 3 Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q81Z97 2.36e-39 160 26 22 684 3 topB DNA topoisomerase 3 Bacillus anthracis
A0R979 2.36e-39 160 26 22 684 3 topB DNA topoisomerase 3 Bacillus thuringiensis (strain Al Hakam)
Q73E74 2.58e-39 159 26 22 684 3 topB DNA topoisomerase 3 Bacillus cereus (strain ATCC 10987 / NRS 248)
Q63GK5 3.29e-39 159 26 22 684 3 topB DNA topoisomerase 3 Bacillus cereus (strain ZK / E33L)
Q9YC75 3.39e-39 161 26 15 603 3 rgy2 Reverse gyrase 2 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Q65N90 8.14e-39 158 26 23 680 3 topB DNA topoisomerase 3 Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
P96583 7.13e-38 155 25 24 754 3 topB DNA topoisomerase 3 Bacillus subtilis (strain 168)
Q9HM08 1.47e-37 154 25 25 707 3 topA DNA topoisomerase 1 Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Q9YCB6 8.19e-37 154 27 25 706 3 rgy1 Reverse gyrase 1 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Q97ZZ8 1.39e-36 152 26 19 656 1 rgy1 Reverse gyrase 1 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
O70157 2.72e-34 145 26 16 575 2 Top3a DNA topoisomerase 3-alpha Mus musculus
Q8CRF7 7.29e-34 142 25 25 716 3 topB DNA topoisomerase 3 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q8TYK7 8.77e-34 137 29 11 363 1 rgyA Reverse gyrase subunit A Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Q13472 3.45e-33 142 26 16 558 1 TOP3A DNA topoisomerase 3-alpha Homo sapiens
Q6GEH9 3.71e-33 140 25 15 561 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain MRSA252)
F4ISQ7 4.09e-33 141 26 13 506 2 At2g32000 DNA topoisomerase 3-beta Arabidopsis thaliana
Q5HLZ4 4.51e-33 140 25 25 716 3 topB DNA topoisomerase 3 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q5WAX6 5.21e-33 140 25 20 698 3 topB DNA topoisomerase 3 Shouchella clausii (strain KSM-K16)
Q0J0S6 5.42e-33 140 25 11 501 2 TOP3B DNA topoisomerase 3-beta Oryza sativa subsp. japonica
Q7A075 1.33e-32 139 25 15 561 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain MW2)
Q6G767 1.33e-32 139 25 15 561 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain MSSA476)
Q7A455 1.33e-32 139 25 15 561 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain N315)
Q99S17 1.33e-32 139 25 15 561 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HDV4 1.33e-32 139 25 15 561 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain COL)
Q2FW03 1.33e-32 139 25 15 561 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FEN5 1.33e-32 139 25 15 561 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain USA300)
O95985 5.26e-32 137 25 20 685 1 TOP3B DNA topoisomerase 3-beta-1 Homo sapiens
P0C2W6 5.46e-32 137 25 15 561 5 topB Putative DNA topoisomerase 3 Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q9Z321 8.65e-31 134 25 13 510 1 Top3b DNA topoisomerase 3-beta-1 Mus musculus
Q9NG98 6.83e-30 131 23 21 623 2 Top3alpha DNA topoisomerase 3-alpha Drosophila melanogaster
C7J0A2 2.77e-29 129 25 13 502 3 TOP3A DNA topoisomerase 3-alpha Oryza sativa subsp. japonica
P34184 3.91e-29 128 22 22 677 3 topA DNA topoisomerase 1 Alkalihalophilus pseudofirmus (strain ATCC BAA-2126 / JCM 17055 / OF4)
Q4L8B8 3.36e-27 122 23 27 723 3 topB DNA topoisomerase 3 Staphylococcus haemolyticus (strain JCSC1435)
O96651 5.9e-27 121 24 12 495 2 Top3beta DNA topoisomerase 3-beta Drosophila melanogaster
O61660 6.68e-26 118 24 10 503 1 top-3 DNA topoisomerase 3 Caenorhabditis elegans
Q49ZH2 7.54e-26 117 23 28 733 3 topB DNA topoisomerase 3 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
P13099 1.15e-25 116 22 8 474 1 TOP3 DNA topoisomerase 3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9LVP1 1.44e-25 117 25 14 500 1 TOP3A DNA topoisomerase 3-alpha Arabidopsis thaliana
O58530 1.21e-24 115 30 11 340 3 rgy Reverse gyrase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
O58530 1.39e-23 111 29 12 275 3 rgy Reverse gyrase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q9KQF5 1.67e-24 113 23 18 592 3 topB DNA topoisomerase 3 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P43704 2.29e-24 112 23 18 554 3 topB DNA topoisomerase 3 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q6F598 2.15e-23 110 29 10 273 3 rgy Reverse gyrase Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Q6F598 2.21e-23 110 30 12 338 3 rgy Reverse gyrase Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
O60126 2.35e-23 109 22 11 507 1 top3 DNA topoisomerase 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P14294 8.78e-23 107 22 19 574 1 topB DNA topoisomerase 3 Escherichia coli (strain K12)
P40687 1.14e-22 107 22 17 574 3 topB DNA topoisomerase 3 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z6F5 1.94e-22 106 22 17 574 3 topB DNA topoisomerase 3 Salmonella typhi
Q9CP53 2.03e-22 106 23 20 566 3 topB DNA topoisomerase 3 Pasteurella multocida (strain Pm70)
Q58907 3.03e-22 107 31 9 258 3 rgy Reverse gyrase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58907 1.48e-16 88 28 12 357 3 rgy Reverse gyrase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A0A0L0P6P7 7.56e-22 104 23 13 500 3 TOP3 DNA topoisomerase 3 Candida auris
Q8T2T7 8.97e-22 105 24 13 524 3 top3 DNA topoisomerase 3 Dictyostelium discoideum
O73954 2.82e-20 100 27 14 347 3 topA DNA topoisomerase 1 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
O73954 5.79e-20 99 31 6 254 3 topA DNA topoisomerase 1 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q9YB01 5.03e-19 95 25 15 525 3 topA DNA topoisomerase 1 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
P40114 2.1e-16 87 22 19 565 3 topX DNA topoisomerase 1 Bacillus anthracis
F1SVH1 1.08e-09 66 30 8 212 1 rgyB Reverse gyrase subunit B Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
P46494 5.61e-06 51 27 12 198 4 HI_0656.1 Uncharacterized protein HI_0656.1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45771 0.000149 47 32 5 100 4 yrdD Uncharacterized protein YrdD Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_05115
Feature type CDS
Gene topA
Product type I DNA topoisomerase
Location 29121 - 31709 (strand: -1)
Length 2589 (nucleotides) / 862 (amino acids)

Contig

Accession contig_5
Length 181448 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_940
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01131 DNA topoisomerase
PF01396 Topoisomerase DNA binding C4 zinc finger
PF01751 Toprim domain
PF08272 Topoisomerase I zinc-ribbon-like
PF21372 Topoisomerase I, zinc finger

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0550 Replication, recombination and repair (L) L DNA topoisomerase IA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03168 DNA topoisomerase I [EC:5.6.2.1] - -

Protein Sequence

MGKALVIVESPAKAKTINKYLGKDYVVKSSVGHIRDLPTSGSASRKPAAAGDKTKKVKKDERTALVSRMGVDPYHGWEADYQILPGKEKVVSELQHLAADASHIYLATDLDREGEAIAWHLREVIGGDDSRFSRVVFNEITKNAISQAFEQPGELNIDRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLIVEREREIKAFVPEEYWQIHALLSDKKDQLRMEVVQENGKTFKAVNEKQAHAAVSKLQAATFKITDREDRPTSSKPGAPFITSTLQQAASTRLSFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDAITMARDYITENFGDKYLPASPNLYSNKENSQEAHEAIRPSDIAVTEEMLKDMEPDARRLYQLIWRQFVACQMTPAKYDSTTLTAEAGDFTLKAKGRTLRFDGWTKVMPALRKNDEDNTLPAIAPGTVMTREAIDPVQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVKVENRRFYAEKMGEIVTDRLEETFAELMNYDFTARMENQLDHIANNEAKWKSVLDEFFADFSKQLDNAGKEPEEGGMRTNPMVITSIICPTCSRPMGIRTASTGVFLGCSGYALPPKERCKQTINLIPEHEILNILEGDDAETNALRARRRCPKCGTAMDSYLIDTGRKLHVCGNNPECEGYEVEEGEFRIKGYDGPVVECEKCGSEMHLKMGRFGKYMGCTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIFLAAHNFPKSRETRAPQVAELVRFKDRLSEKMRYLAEAPVADPDGNPTTVRWSRKTKQQYVASDKDGKATGWSAFYIDGKWVEKAK

Flanking regions ( +/- flanking 50bp)

CAAAAATTGGCGTTTTTATAATCGCCCCGAAAATTTAGGTAATGATAATTATGGGTAAAGCTCTTGTCATCGTGGAGTCCCCGGCAAAAGCCAAAACGATTAACAAGTATCTCGGCAAAGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGGGATCTGCCGACGAGTGGTTCAGCGAGCCGTAAACCCGCTGCTGCAGGCGATAAAACGAAAAAAGTTAAAAAAGACGAACGCACAGCGCTGGTCAGCCGGATGGGTGTTGACCCGTACCACGGCTGGGAAGCGGATTATCAGATTCTGCCGGGCAAAGAAAAGGTTGTTTCTGAATTACAGCACCTGGCCGCCGATGCATCACACATCTATCTCGCAACGGACCTTGACCGCGAAGGGGAAGCCATTGCATGGCACCTGCGGGAAGTGATCGGCGGTGATGACAGCCGCTTCAGCCGGGTTGTATTTAATGAAATCACCAAAAATGCGATAAGTCAGGCGTTTGAACAGCCGGGCGAACTGAATATTGACCGTGTGAATGCCCAGCAGGCGCGCCGCTTTATGGATCGCGTGGTGGGTTACATGGTGTCTCCGCTGCTGTGGAAGAAAATTGCCCGTGGTTTATCCGCCGGTCGTGTGCAGTCTGTCGCGGTGCGTCTGATTGTTGAGCGCGAGCGCGAAATCAAAGCGTTTGTACCGGAAGAGTACTGGCAGATCCACGCACTGCTGTCTGATAAAAAAGATCAGCTGCGCATGGAAGTGGTGCAGGAAAACGGCAAAACCTTTAAAGCGGTCAATGAGAAACAGGCACATGCCGCTGTCAGCAAGTTACAGGCTGCCACCTTTAAAATTACTGACCGCGAAGACCGTCCGACCTCCAGCAAGCCGGGCGCGCCGTTTATTACCTCCACACTCCAGCAGGCCGCGAGTACGCGCCTGAGCTTTGGCGTGAAGAAAACCATGATGATGGCACAGCGTCTTTATGAAGCCGGTCACATCACCTATATGCGTACCGATTCCACCAACCTGAGCCAGGATGCCATTACAATGGCGCGTGACTATATCACTGAGAATTTCGGTGATAAGTATTTGCCTGCCTCGCCGAATCTGTACAGCAACAAAGAGAATTCCCAGGAAGCGCACGAAGCTATCCGTCCGTCTGATATCGCTGTAACGGAAGAGATGCTCAAGGATATGGAGCCGGATGCGCGCCGCCTGTATCAGTTGATCTGGCGTCAGTTTGTCGCGTGTCAGATGACACCGGCAAAATACGATTCCACCACACTGACCGCAGAAGCGGGTGATTTCACACTGAAAGCCAAAGGGCGCACACTGCGTTTCGACGGCTGGACCAAAGTGATGCCTGCACTGCGTAAGAATGATGAAGATAATACGCTGCCTGCGATTGCGCCGGGCACGGTCATGACGCGCGAAGCGATTGATCCGGTACAGCACTTCACTAAACCGCCTGCGCGTTTCAGTGAGGCGTCACTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCCACCTATGCGTCAATTATTTCCACCATTCAGGATCGCGGTTATGTGAAAGTGGAAAACCGCCGTTTCTATGCTGAGAAAATGGGTGAAATTGTCACCGATCGTCTCGAAGAAACCTTTGCGGAACTGATGAACTACGACTTTACCGCACGGATGGAAAATCAGCTCGACCATATCGCCAACAATGAAGCGAAGTGGAAATCGGTGCTGGACGAATTCTTTGCTGATTTCAGCAAGCAGCTGGATAACGCGGGCAAAGAGCCGGAAGAAGGCGGTATGCGAACGAACCCGATGGTCATTACCTCGATCATCTGTCCGACCTGTTCCCGCCCGATGGGGATCCGTACCGCATCCACCGGGGTATTCCTGGGCTGTTCCGGTTATGCTCTGCCGCCGAAAGAGCGCTGCAAGCAGACCATCAACCTGATTCCGGAACACGAAATCCTCAATATCCTTGAAGGGGATGACGCGGAAACCAATGCGCTGCGTGCCCGCCGCCGCTGCCCGAAATGCGGCACTGCGATGGACAGCTACCTGATCGACACCGGCCGTAAACTGCATGTCTGCGGTAACAACCCGGAATGTGAAGGGTACGAAGTCGAAGAAGGTGAGTTCCGCATTAAAGGGTATGATGGCCCGGTCGTTGAATGTGAGAAATGCGGCTCTGAGATGCACCTGAAAATGGGGCGTTTCGGTAAGTACATGGGCTGTACCAACGACGAGTGTAAAAACACCCGTAAAATTCTGCGTAACGGTGAAGTCGCTCCGCCGAAAGAAGATCCGGTTCCGTTACCGGAACTGCCGTGCGAAAAATCAGACGCGTACTTTGTACTGCGTGATGGTGCTGCCGGTATCTTCCTGGCGGCGCACAATTTCCCTAAATCACGGGAAACCCGTGCACCGCAGGTAGCAGAACTGGTTCGCTTTAAAGATCGTCTGTCTGAGAAAATGCGTTATCTGGCGGAAGCGCCGGTGGCGGATCCGGACGGTAATCCGACGACTGTCCGCTGGAGCCGCAAAACCAAACAGCAGTATGTGGCATCCGATAAAGACGGCAAAGCCACCGGCTGGTCTGCATTCTATATTGACGGCAAATGGGTTGAGAAAGCCAAATAATCTGTCGTCATAATATCGGCGGTATCGTAATAATAAAAACCGGTCAGGAA