K03168


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03168, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03168
KO K03168
Description DNA topoisomerase I [EC:5.6.2.1]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K03168 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_940 PMI_RS06435 1411151 1413748 -1 topA type I DNA topoisomerase Proteus mirabilis HI4320
1 group_940 FBDBKF_05115 29121 31709 -1 topA type I DNA topoisomerase Morganella morganii S1
2 group_940 EHELCC_12475 149785 152373 1 topA type I DNA topoisomerase Morganella morganii S2
3 group_940 NLDBIP_12815 149740 152328 1 topA type I DNA topoisomerase Morganella morganii S4
4 group_940 LHKJJB_12675 149785 152373 1 topA type I DNA topoisomerase Morganella morganii S3
5 group_940 HKOGLL_11290 149785 152373 1 topA type I DNA topoisomerase Morganella morganii S5
6 group_940 F4V73_RS05570 1184169 1186769 -1 topA type I DNA topoisomerase Morganella psychrotolerans