Orthogroup:group_1007


Homologs in group_1007

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05625 FBDBKF_05625 Morganella morganii S1 sapB putrescine export ABC transporter permease SapB
EHELCC_11965 EHELCC_11965 Morganella morganii S2 sapB putrescine export ABC transporter permease SapB
NLDBIP_12305 NLDBIP_12305 Morganella morganii S4 sapB putrescine export ABC transporter permease SapB
LHKJJB_12165 LHKJJB_12165 Morganella morganii S3 sapB putrescine export ABC transporter permease SapB
HKOGLL_10780 HKOGLL_10780 Morganella morganii S5 sapB putrescine export ABC transporter permease SapB
F4V73_RS03680 F4V73_RS03680 Morganella psychrotolerans sapB putrescine export ABC transporter permease SapB
PMI_RS06660 PMI_RS06660 Proteus mirabilis HI4320 sapB putrescine export ABC transporter permease SapB

Distribution of group_1007 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1007 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1007

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1007.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sapB 7

Product

# Product Occurence
1 putrescine export ABC transporter permease SapB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4168 7 V Defense mechanisms (V) ABC-type antimicrobial peptide export system, permease component SapB

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19227 7 cationic peptide transport system permease protein Cationic antimicrobial peptide (CAMP) resistance
ABC transporters		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component

Annotations of the 74 SwissProt hits

Annotation Number of occurrences
Di/tripeptide transport system permease protein DppB 1
Dipeptide transport system permease protein DppB 7
Glutathione transport system permease protein GsiC 16
Inner membrane ABC transporter permease protein YejB 2
Metal-staphylopine import system permease protein CntB 2
Nickel import system permease protein NikB 9
Nickel transport system permease protein NikB 1
Oligopeptide transport system permease protein AmiC 2
Oligopeptide transport system permease protein AppB 1
Oligopeptide transport system permease protein OppB 11
Peptide transport system permease protein SapB 4
Peptidoglycan transport system permease protein YejB 1
Probable D,D-dipeptide transport system permease protein DdpB 1
Probable peptide ABC transporter permease protein y4tP 1
Putative peptide permease protein BMEII0860 1
Putative peptide permease protein BOV_A0351 1
Putative peptide permease protein BRA0408/BS1330_II0405 1
Putative peptide transport permease protein MT1320 1
Putative peptide transport permease protein Mb1314c 1
Putative peptide transport permease protein Rv1283c 1
Putative peptide transport system permease protein BAB2_1050 1
Putative peptide transport system permease protein BAB2_1051 1
Putative peptide transport system permease protein BMEII0207/BMEII0208 1
Putative peptide transport system permease protein BMEII0209 1
Putative peptide transport system permease protein BRA1092/BS1330_II1084 1
Putative peptide transport system permease protein BRA1093/BS1330_II1085 1
Putative peptide transport system permease protein BruAb2_1031 1
Putative peptide transport system permease protein BruAb2_1032 1
Putrescine export system permease protein SapB 1

Protein length

Unique protein length 321

Protein length distribution