Homologs in group_940

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05115 FBDBKF_05115 82.4 Morganella morganii S1 topA type I DNA topoisomerase
EHELCC_12475 EHELCC_12475 82.4 Morganella morganii S2 topA type I DNA topoisomerase
NLDBIP_12815 NLDBIP_12815 82.4 Morganella morganii S4 topA type I DNA topoisomerase
LHKJJB_12675 LHKJJB_12675 82.4 Morganella morganii S3 topA type I DNA topoisomerase
HKOGLL_11290 HKOGLL_11290 82.4 Morganella morganii S5 topA type I DNA topoisomerase
F4V73_RS05570 F4V73_RS05570 82.2 Morganella psychrotolerans topA type I DNA topoisomerase

Distribution of the homologs in the orthogroup group_940

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_940

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06612 0.0 1501 80 0 865 1 topA DNA topoisomerase 1 Escherichia coli (strain K12)
P0A2I1 0.0 1488 80 0 865 3 topA DNA topoisomerase 1 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2I2 0.0 1488 80 0 865 3 topA DNA topoisomerase 1 Salmonella typhi
P43012 0.0 1307 71 4 871 3 topA DNA topoisomerase 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CN30 0.0 1288 70 4 871 3 topA DNA topoisomerase 1 Pasteurella multocida (strain Pm70)
Q9KRB2 0.0 1269 69 3 873 3 topA DNA topoisomerase 1 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9HZJ5 0.0 1193 65 3 865 3 topA DNA topoisomerase 1 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P57371 0.0 1036 56 4 861 3 topA DNA topoisomerase 1 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9P7 0.0 980 53 7 863 3 topA DNA topoisomerase 1 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q8NWZ9 1.66e-169 510 40 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MW2)
Q8NWZ9 1.59e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MW2)
Q6G9W3 1.66e-169 510 40 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MSSA476)
Q6G9W3 1.59e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MSSA476)
Q6GHI5 1.66e-169 510 40 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MRSA252)
Q6GHI5 1.59e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain MRSA252)
Q7A5Y5 1.66e-169 510 40 12 708 1 topA DNA topoisomerase 1 Staphylococcus aureus (strain N315)
Q7A5Y5 1.59e-05 52 37 1 62 1 topA DNA topoisomerase 1 Staphylococcus aureus (strain N315)
Q99UM1 1.66e-169 510 40 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q99UM1 1.59e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HGI2 3.53e-169 509 40 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain COL)
Q5HGI2 1.72e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain COL)
Q2FZ32 3.53e-169 509 40 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FZ32 1.72e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FHI8 3.53e-169 509 40 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain USA300)
Q2FHI8 1.72e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain USA300)
Q2YXL8 3.85e-169 509 40 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q2YXL8 1.62e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q06AK7 7.5e-169 509 39 12 708 3 topA DNA topoisomerase 1 Staphylococcus aureus
Q06AK7 1.51e-05 52 37 1 62 3 topA DNA topoisomerase 1 Staphylococcus aureus
Q4L5V2 1.47e-167 505 38 17 752 3 topA DNA topoisomerase 1 Staphylococcus haemolyticus (strain JCSC1435)
Q4L5V2 3.21e-05 51 45 1 44 3 topA DNA topoisomerase 1 Staphylococcus haemolyticus (strain JCSC1435)
Q9KA23 2.01e-167 505 39 10 726 3 topA DNA topoisomerase 1 Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q9KA23 6.54e-06 53 37 4 79 3 topA DNA topoisomerase 1 Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q8CSU3 9.88e-167 503 40 12 704 3 topA DNA topoisomerase 1 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q8CSU3 2.9e-05 51 45 1 44 3 topA DNA topoisomerase 1 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HPU2 9.88e-167 503 40 12 704 3 topA DNA topoisomerase 1 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q5HPU2 2.9e-05 51 45 1 44 3 topA DNA topoisomerase 1 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q9PLZ2 1.82e-163 495 37 16 755 3 topA DNA topoisomerase 1 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P39814 4.76e-159 484 38 14 753 1 topA DNA topoisomerase 1 Bacillus subtilis (strain 168)
Q49X35 1.63e-158 482 39 13 734 3 topA DNA topoisomerase 1 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q49X35 2.99e-05 51 45 1 44 3 topA DNA topoisomerase 1 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q4UM42 6.77e-156 478 38 18 794 3 topA DNA topoisomerase 1 Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92IH1 7.58e-155 476 38 19 794 3 topA DNA topoisomerase 1 Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q1RIM1 7.95e-153 471 38 16 763 3 topA DNA topoisomerase 1 Rickettsia bellii (strain RML369-C)
Q9CG80 1.69e-151 465 37 17 753 3 topA DNA topoisomerase 1 Lactococcus lactis subsp. lactis (strain IL1403)
Q68X45 1.12e-149 462 36 18 794 3 topA DNA topoisomerase 1 Rickettsia typhi (strain ATCC VR-144 / Wilmington)
P55991 4.62e-146 451 36 16 745 1 topA DNA topoisomerase 1 Helicobacter pylori (strain ATCC 700392 / 26695)
P55991 0.00026 48 30 5 130 1 topA DNA topoisomerase 1 Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZDK2 5.88e-146 452 36 18 794 3 topA DNA topoisomerase 1 Rickettsia prowazekii (strain Madrid E)
Q87AQ6 4.16e-142 444 41 11 606 3 topA DNA topoisomerase 1 Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9PEV8 7e-142 443 41 10 605 3 topA DNA topoisomerase 1 Xylella fastidiosa (strain 9a5c)
Q9ZMV7 1.14e-141 440 36 16 745 3 topA DNA topoisomerase 1 Helicobacter pylori (strain J99 / ATCC 700824)
Q9ZMV7 0.000273 48 30 5 130 3 topA DNA topoisomerase 1 Helicobacter pylori (strain J99 / ATCC 700824)
O83409 1.09e-138 432 35 14 764 3 topA DNA topoisomerase 1 Treponema pallidum (strain Nichols)
Q9X909 9.01e-135 429 44 10 602 3 topA DNA topoisomerase 1 Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
O69548 1.19e-132 423 36 19 803 3 topA DNA topoisomerase 1 Mycobacterium leprae (strain TN)
A0R5D9 1.4e-132 422 42 11 605 1 topA DNA topoisomerase 1 Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
P9WG49 3.14e-131 419 39 19 700 1 topA DNA topoisomerase 1 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WG48 3.14e-131 419 39 19 700 3 topA DNA topoisomerase 1 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5U8X0 3.14e-131 419 39 19 700 1 topA DNA topoisomerase 1 Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
P0A621 3.14e-131 419 39 19 700 3 topA DNA topoisomerase 1 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9X3X7 3.43e-131 425 39 15 654 3 topA DNA topoisomerase 1 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
O34204 1.78e-129 407 38 12 632 3 topA DNA topoisomerase 1 Fervidobacterium islandicum
P73810 1.53e-125 403 40 9 590 3 topA DNA topoisomerase 1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P34185 8.71e-125 400 39 6 589 3 topA DNA topoisomerase 1 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P46799 4.48e-123 388 37 14 631 1 topA DNA topoisomerase 1 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
O66893 3.77e-109 348 36 11 582 3 topA DNA topoisomerase 1 Aquifex aeolicus (strain VF5)
O51768 2.71e-104 345 35 8 592 3 topA DNA topoisomerase 1 Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
P78032 3.82e-104 341 33 15 667 3 topA DNA topoisomerase 1 Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q9JN65 1.24e-103 340 34 12 650 3 topA DNA topoisomerase 1 Mycoplasmoides gallisepticum (strain R(low / passage 15 / clone 2))
Q5UQB5 9.34e-100 333 33 14 636 1 TOP1P DNA topoisomerase 1 type prokaryotic Acanthamoeba polyphaga mimivirus
Q9PHK2 5.52e-97 320 33 14 644 3 XF_a0003 DNA topoisomerase I, plasmid Xylella fastidiosa (strain 9a5c)
P47368 3.06e-96 320 30 19 736 3 topA DNA topoisomerase 1 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q59046 5.48e-59 218 27 25 791 3 topA DNA topoisomerase 1 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O27661 7.83e-59 217 27 16 654 3 topA DNA topoisomerase 1 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q9UZ86 3.37e-54 207 29 18 606 3 rgy Reverse gyrase Pyrococcus abyssi (strain GE5 / Orsay)
Q9UYS8 1.33e-53 201 27 17 586 3 topA DNA topoisomerase 1 Pyrococcus abyssi (strain GE5 / Orsay)
P95479 7.27e-53 204 29 18 614 1 rgy Reverse gyrase Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q74MA4 9.23e-52 196 28 13 595 1 rgyA Reverse gyrase subunit A Nanoarchaeum equitans (strain Kin4-M)
O58356 7.69e-51 193 28 19 600 3 topA DNA topoisomerase 1 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
O67226 3.89e-50 195 27 16 604 3 rgy2 Reverse gyrase 2 Aquifex aeolicus (strain VF5)
O67037 6.94e-50 194 29 18 581 3 rgy1 Reverse gyrase 1 Aquifex aeolicus (strain VF5)
Q971T7 2.53e-47 186 27 16 614 1 rgy1 Reverse gyrase 1 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
O51934 2e-45 180 27 16 604 1 rgy Reverse gyrase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q97ZF5 2.3e-44 177 29 23 625 1 rgy2 Reverse gyrase 2 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Q8R979 2.57e-44 177 27 20 613 1 rgy Reverse gyrase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
O28469 7.29e-43 169 28 16 552 3 topA DNA topoisomerase 1 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q08582 1.83e-41 168 25 20 655 1 rgy1 Reverse gyrase 1 Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q8ZXT5 2.9e-41 167 27 21 640 3 rgy Reverse gyrase Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2)
O29238 2.1e-40 164 26 17 611 1 rgy Reverse gyrase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P74759 2.77e-40 164 28 23 620 1 rgy Reverse gyrase Saccharolobus shibatae (strain ATCC 51178 / DSM 5389 / JCM 8931 / NBRC 15437 / B12)
Q975P6 4.91e-40 164 26 22 646 3 rgy2 Reverse gyrase 2 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Q9YC75 7.55e-38 157 26 17 622 3 rgy2 Reverse gyrase 2 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Q97ZZ8 3.95e-37 154 27 26 665 1 rgy1 Reverse gyrase 1 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
P0DW67 6.1e-37 154 25 17 612 2 rgy2 Reverse gyrase 2 Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q9YCB6 1.73e-36 152 26 26 746 3 rgy1 Reverse gyrase 1 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
P96583 2.06e-36 150 26 22 674 3 topB DNA topoisomerase 3 Bacillus subtilis (strain 168)
Q9HM08 7.49e-36 149 24 22 695 3 topA DNA topoisomerase 1 Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
O95985 2.1e-34 145 24 16 618 1 TOP3B DNA topoisomerase 3-beta-1 Homo sapiens
Q8TYK7 5.87e-34 137 32 15 332 1 rgyA Reverse gyrase subunit A Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Q65N90 6.53e-34 143 24 18 668 3 topB DNA topoisomerase 3 Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
Q81IH1 6.6e-34 143 24 22 687 3 topB DNA topoisomerase 3 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q9Z321 2.83e-32 138 25 11 515 1 Top3b DNA topoisomerase 3-beta-1 Mus musculus
Q9NG98 3.45e-32 139 24 20 611 2 Top3alpha DNA topoisomerase 3-alpha Drosophila melanogaster
Q6GEH9 3.9e-32 137 24 14 568 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain MRSA252)
Q7A075 1.22e-31 135 23 19 677 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain MW2)
Q6G767 1.22e-31 135 23 19 677 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain MSSA476)
Q7A455 1.22e-31 135 23 19 677 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain N315)
Q99S17 1.22e-31 135 23 19 677 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HDV4 1.22e-31 135 23 19 677 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain COL)
Q2FEN5 1.22e-31 135 23 19 677 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain USA300)
Q2FW03 1.74e-31 135 23 19 677 3 topB DNA topoisomerase 3 Staphylococcus aureus (strain NCTC 8325 / PS 47)
C7J0A2 5.06e-31 134 25 23 614 3 TOP3A DNA topoisomerase 3-alpha Oryza sativa subsp. japonica
Q13472 6.14e-31 134 24 13 558 1 TOP3A DNA topoisomerase 3-alpha Homo sapiens
Q6HP19 6.22e-31 134 24 21 687 3 topB DNA topoisomerase 3 Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q81Z97 6.22e-31 134 24 21 687 3 topB DNA topoisomerase 3 Bacillus anthracis
A0R979 6.22e-31 134 24 21 687 3 topB DNA topoisomerase 3 Bacillus thuringiensis (strain Al Hakam)
Q63GK5 6.33e-31 134 24 21 687 3 topB DNA topoisomerase 3 Bacillus cereus (strain ZK / E33L)
Q5WAX6 7.36e-31 133 25 23 706 3 topB DNA topoisomerase 3 Shouchella clausii (strain KSM-K16)
O70157 8.86e-31 134 24 13 573 2 Top3a DNA topoisomerase 3-alpha Mus musculus
Q4L8B8 8.95e-31 133 23 25 719 3 topB DNA topoisomerase 3 Staphylococcus haemolyticus (strain JCSC1435)
P0C2W6 9.11e-31 133 24 14 568 5 topB Putative DNA topoisomerase 3 Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q73E74 1.07e-30 133 24 21 687 3 topB DNA topoisomerase 3 Bacillus cereus (strain ATCC 10987 / NRS 248)
Q8CRF7 2.4e-29 128 24 28 721 3 topB DNA topoisomerase 3 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
F4ISQ7 7.25e-29 127 25 13 513 2 At2g32000 DNA topoisomerase 3-beta Arabidopsis thaliana
Q5HLZ4 1.47e-28 126 24 28 721 3 topB DNA topoisomerase 3 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
O61660 3.4e-28 125 24 9 503 1 top-3 DNA topoisomerase 3 Caenorhabditis elegans
Q0J0S6 2.2e-27 123 24 11 504 2 TOP3B DNA topoisomerase 3-beta Oryza sativa subsp. japonica
O96651 7.39e-27 121 24 17 599 2 Top3beta DNA topoisomerase 3-beta Drosophila melanogaster
P34184 1.07e-26 120 22 17 585 3 topA DNA topoisomerase 1 Alkalihalophilus pseudofirmus (strain ATCC BAA-2126 / JCM 17055 / OF4)
Q9LVP1 2.19e-26 120 25 15 539 1 TOP3A DNA topoisomerase 3-alpha Arabidopsis thaliana
Q8T2T7 2.92e-26 119 24 13 544 3 top3 DNA topoisomerase 3 Dictyostelium discoideum
P13099 1.94e-25 116 24 13 478 1 TOP3 DNA topoisomerase 3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9KQF5 1.07e-23 110 26 23 590 3 topB DNA topoisomerase 3 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
O58530 2.68e-23 110 30 9 341 3 rgy Reverse gyrase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
O58530 3.43e-21 103 28 10 274 3 rgy Reverse gyrase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q49ZH2 3.85e-23 108 23 21 641 3 topB DNA topoisomerase 3 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
P40687 6.48e-23 108 24 18 550 3 topB DNA topoisomerase 3 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P43704 1.95e-22 106 24 18 552 3 topB DNA topoisomerase 3 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P14294 2.29e-22 106 23 18 550 1 topB DNA topoisomerase 3 Escherichia coli (strain K12)
Q6F598 4.03e-22 106 30 13 345 3 rgy Reverse gyrase Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Q6F598 1.39e-21 105 28 11 274 3 rgy Reverse gyrase Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
O60126 7.01e-22 104 23 12 508 1 top3 DNA topoisomerase 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8Z6F5 1.59e-21 103 23 17 550 3 topB DNA topoisomerase 3 Salmonella typhi
Q9YB01 2.61e-21 103 25 17 536 3 topA DNA topoisomerase 1 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
O73954 4.25e-20 100 25 12 349 3 topA DNA topoisomerase 1 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
O73954 1.27e-17 92 28 7 270 3 topA DNA topoisomerase 1 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
A0A0L0P6P7 8.94e-20 98 24 12 441 3 TOP3 DNA topoisomerase 3 Candida auris
Q9CP53 9.68e-20 98 23 22 563 3 topB DNA topoisomerase 3 Pasteurella multocida (strain Pm70)
Q58907 1.76e-18 95 29 9 260 3 rgy Reverse gyrase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58907 1.12e-17 92 26 10 362 3 rgy Reverse gyrase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P40114 4.96e-18 93 21 18 567 3 topX DNA topoisomerase 1 Bacillus anthracis
F1SVH1 4.87e-09 64 35 1 98 1 rgyB Reverse gyrase subunit B Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
P45771 2.56e-06 52 36 5 100 4 yrdD Uncharacterized protein YrdD Escherichia coli (strain K12)
P45771 0.001 44 31 2 85 4 yrdD Uncharacterized protein YrdD Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06435
Feature type CDS
Gene topA
Product type I DNA topoisomerase
Location 1411151 - 1413748 (strand: -1)
Length 2598 (nucleotides) / 865 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_940
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01131 DNA topoisomerase
PF01396 Topoisomerase DNA binding C4 zinc finger
PF01751 Toprim domain
PF08272 Topoisomerase I zinc-ribbon-like
PF21372 Topoisomerase I, zinc finger

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0550 Replication, recombination and repair (L) L DNA topoisomerase IA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03168 DNA topoisomerase I [EC:5.6.2.1] - -

Protein Sequence

MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPKSGSGSQKSENSSATKGVKKVKKDEKSALVSRMGVDPYNGWHANYQILPGKEKVVAELKALAEKADHIYLATDLDREGEAIAWHLREVIGGEDDRFSRVVFNEITKNAITQAFQTPGELNIDRVNAQQARRFMDRVVGYMVSPLLWKKVARGLSAGRVQSVAVRLLVEREREIKAFVPEEYWQLHASLLTPDEQPLRMEVTHYQDNAFKPVSSEETQVAVKALQNATFIVKNREDRPTSSKPSAPLITSTLQQAASTRLSFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDAIQMARDYIHDKFGAKYLPKEPNVYSSKENSQEAHEAIRPSDINVTAESLKDMDSDAKRLYQLIWDQFVACQMTPAKYDSTTLTVVSGDYKLRAKGRTLRFAGWTKVMPAMRSKDEDKTLPAVDVGAQLALAELSPTQHFTKPPARFSEATLVKELEKRGIGRPSTYASIISTIQDRGYVKVENRRFYAEKMGEIVTDRLEENFSDLMNYDFTAQMEDHLDHVANNQENWKAVLDAFFTDFSQQLEVAEKDPEEGGMRPNPMVITSIECPTCSRHMGIRTATTGVFLGCSGYALPPKERCKQTINLIPEDELLNILEGDDAETNALRARRRCPKCGTAMDSYLIDTHRKLHVCGNNPACDGYEVEEGEFRLKGYEGPVIECDKCGAEMHLKMGRFGKYMGCTNEECKNTRKILKSGEIAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIFLAANTFPKSRETRAPKVAELVRFKDRLSEKMRYLAQAPVTDPEGNPTIVRFSRKTKQQYVSSEKEGKATGWSAFYIDGKWVEKSK

Flanking regions ( +/- flanking 50bp)

GGGTATTAAACAATACCGTCATGACAAAGTTTAATTAGGTAAAGGTAATTATGGGTAAAGCTCTTGTTATCGTGGAGTCCCCGGCTAAAGCCAAAACAATCAATAAATATCTTGGCAATGACTACGTAGTAAAATCTAGCGTGGGTCACATTCGTGATTTGCCAAAAAGTGGTTCTGGCAGCCAGAAGAGCGAAAACTCATCCGCCACGAAAGGCGTGAAAAAGGTTAAAAAGGATGAGAAATCAGCCTTAGTCAGCCGTATGGGTGTCGATCCTTATAATGGTTGGCATGCAAACTACCAAATTCTGCCGGGTAAAGAGAAGGTAGTCGCTGAACTAAAAGCATTGGCTGAAAAAGCAGATCATATCTATCTCGCAACGGACCTTGACCGCGAAGGAGAAGCTATCGCGTGGCATTTACGCGAAGTGATCGGCGGTGAAGATGATAGATTTAGTCGTGTCGTGTTTAATGAAATTACGAAAAATGCCATTACACAAGCATTCCAAACACCGGGTGAGCTGAATATTGACCGTGTTAACGCGCAACAAGCACGTCGTTTTATGGATCGTGTAGTTGGCTATATGGTTTCTCCGCTGTTATGGAAAAAAGTGGCGCGTGGTTTATCTGCGGGGCGTGTACAGTCAGTTGCGGTACGCCTACTCGTCGAGCGTGAACGTGAAATTAAAGCATTTGTGCCAGAAGAGTATTGGCAATTACACGCTTCACTGCTGACACCCGATGAACAACCCTTGCGTATGGAAGTGACGCACTATCAAGATAACGCCTTTAAACCAGTCTCCTCTGAGGAAACTCAGGTGGCGGTTAAGGCGTTACAGAATGCCACTTTCATCGTTAAAAACCGTGAAGATAGACCAACATCCAGTAAACCAAGTGCCCCTTTGATCACCTCTACATTGCAACAAGCGGCAAGTACTCGCTTAAGCTTTGGGGTGAAAAAGACCATGATGTTGGCTCAACGTCTTTATGAAGCAGGTTATATCACCTATATGCGTACTGACTCTACCAACCTGAGTCAGGATGCAATCCAAATGGCACGTGATTATATTCACGATAAATTTGGTGCAAAATATCTGCCTAAAGAGCCGAATGTTTATTCAAGTAAAGAGAACTCACAAGAAGCGCACGAAGCTATTCGTCCTTCTGATATCAATGTGACGGCTGAATCTTTAAAAGATATGGATAGCGACGCGAAGCGTTTATATCAACTGATTTGGGATCAATTTGTCGCCTGTCAAATGACACCGGCAAAATATGACTCAACCACACTTACGGTTGTATCAGGGGATTATAAACTACGCGCTAAAGGTCGCACATTACGTTTTGCGGGTTGGACAAAAGTCATGCCAGCAATGCGCAGTAAAGATGAAGATAAAACATTACCAGCGGTTGATGTAGGGGCGCAATTAGCGTTAGCTGAGTTATCGCCAACGCAACACTTTACTAAGCCACCAGCGCGTTTTAGTGAAGCGACATTAGTTAAAGAGCTAGAAAAACGAGGTATTGGTCGACCTTCAACTTATGCTTCAATTATCTCTACCATTCAAGATAGAGGTTATGTCAAAGTTGAAAACCGTCGTTTCTATGCAGAAAAAATGGGTGAGATTGTTACCGATCGCTTAGAAGAAAACTTTAGTGATTTGATGAACTACGATTTCACGGCTCAAATGGAAGATCATCTCGACCATGTTGCCAACAACCAAGAAAACTGGAAAGCGGTATTAGATGCATTCTTCACAGATTTTAGTCAGCAACTAGAAGTCGCTGAAAAAGATCCAGAAGAAGGAGGAATGCGACCTAACCCTATGGTTATTACTTCTATTGAATGTCCTACTTGTTCTCGTCATATGGGAATTAGAACAGCGACGACAGGGGTATTCTTAGGGTGCTCGGGCTATGCTTTACCACCAAAAGAGCGTTGTAAACAAACGATAAATCTTATTCCTGAAGATGAATTACTTAATATCTTGGAAGGAGATGATGCGGAAACTAATGCATTACGTGCCCGTCGTCGTTGTCCGAAATGCGGTACGGCAATGGACAGTTATCTTATTGATACTCATCGTAAATTACATGTTTGTGGTAATAATCCTGCATGTGATGGTTATGAAGTTGAAGAAGGTGAATTCCGCTTAAAAGGTTATGAAGGCCCAGTGATTGAGTGTGATAAATGTGGCGCTGAAATGCATCTAAAAATGGGGCGTTTTGGCAAGTACATGGGTTGCACCAATGAAGAGTGTAAAAATACACGTAAGATCTTAAAGAGTGGTGAAATTGCACCACCAAAAGAAGATCCGGTTCCACTACCTGAATTGCCTTGTGAAAAATCGGATGCTTACTTTGTGTTACGTGATGGCGCGGCGGGTATTTTCCTTGCGGCCAATACGTTCCCTAAATCAAGGGAAACCCGTGCACCGAAAGTGGCTGAGTTAGTACGTTTTAAAGATAGATTATCGGAAAAAATGCGCTACTTAGCACAAGCACCTGTAACCGATCCAGAAGGGAATCCAACCATAGTACGTTTTAGTCGTAAAACTAAACAGCAATATGTCTCTTCTGAAAAAGAGGGGAAAGCAACAGGTTGGTCAGCCTTTTATATTGATGGCAAATGGGTTGAAAAAAGTAAATAATATCGATAGTTATTGATATTTTAAGATAAAAAAGCGACTTACTGACATAA